RNA–Protein interactions for RNA: ENST00000502490.1

TRIO-203, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-203ENST00000502490 ATP6V1AP38606 617 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 CCT4P50991 539 aaKnown RBP7.69□□□□□ -1.18
TRIO-203ENST00000502490 COPS2P61201 443 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 USP46P62068 366 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 PKP1Q13835 747 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 ATP2B3Q16720 1220 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 CEP85Q6P2H3 762 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 USP48Q86UV5 1035 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 ZNF397Q8NF99 534 aaPredicted RBP7.69□□□□□ -1.18
TRIO-203ENST00000502490 FAM200AQ8TCP9 573 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 IPO4Q8TEX9 1081 aaKnown RBP7.69□□□□□ -1.18
TRIO-203ENST00000502490 ZNF516Q92618 1163 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 TIGD1Q96MW7 591 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 ESYT1Q9BSJ8 1104 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 CTNNA3Q9UI47 895 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 CAMSAP1Q5T5Y3 1602 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 KNDC1Q76NI1 1749 aa7.69□□□□□ -1.18
TRIO-203ENST00000502490 TUBGCP6Q96RT7 1819 aa7.68□□□□□ -1.18
TRIO-203ENST00000502490 FYB1O15117 783 aa7.68□□□□□ -1.18
TRIO-203ENST00000502490 ZPR1O75312 459 aa7.68□□□□□ -1.18
TRIO-203ENST00000502490 PDE1AP54750 535 aa7.68□□□□□ -1.18
TRIO-203ENST00000502490 PUS10Q3MIT2 529 aaKnown RBP7.68□□□□□ -1.18
TRIO-203ENST00000502490 CCDC112Q8NEF3 446 aa7.68□□□□□ -1.18
TRIO-203ENST00000502490 BEGAINQ9BUH8 593 aa7.68□□□□□ -1.18
TRIO-203ENST00000502490 GPBP1L1Q9HC44 474 aaPredicted RBP7.68□□□□□ -1.18
TRIO-203ENST00000502490 PRDM10Q9NQV6 1147 aa7.68□□□□□ -1.18
TRIO-203ENST00000502490 SH2B1Q9NRF2 756 aaPredicted RBP7.68□□□□□ -1.18
TRIO-203ENST00000502490 STAP2Q9UGK3 403 aa7.68□□□□□ -1.18
TRIO-203ENST00000502490 ITSN1Q15811 1721 aa7.68□□□□□ -1.18
TRIO-203ENST00000502490 ADGRL3Q9HAR2 1447 aa7.68□□□□□ -1.18
TRIO-203ENST00000502490 RIMS2Q9UQ26 1411 aa7.68□□□□□ -1.18
TRIO-203ENST00000502490 DLC1Q96QB1 1528 aa7.68□□□□□ -1.18
TRIO-203ENST00000502490 HOXA2O43364 376 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 ATP8B1O43520 1251 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 NR1I2O75469 434 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 RAPGEF3O95398 923 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 PDCP20941 246 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 PRKAR2BP31323 418 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 HSPA4P34932 840 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 PDE4CQ08493 712 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 RTF1Q92541 710 aaKnown RBP7.67□□□□□ -1.18
TRIO-203ENST00000502490 KDM4CQ9H3R0 1056 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 MBIPQ9NS73 344 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 FAM53CQ9NYF3 392 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 STK17AQ9UEE5 414 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 NSFL1CQ9UNZ2 370 aaKnown RBP7.67□□□□□ -1.18
TRIO-203ENST00000502490 CD163L1Q9NR16 1453 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 ARHGEF40Q8TER5 1519 aa7.67□□□□□ -1.18
TRIO-203ENST00000502490 STX6O43752 255 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 F13A1P00488 732 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 GNAI3P08754 354 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 HCLS1P14317 486 aaPredicted RBP7.66□□□□□ -1.18
TRIO-203ENST00000502490 NCBP1Q09161 790 aaKnown RBP7.66□□□□□ -1.18
TRIO-203ENST00000502490 TERF2Q15554 542 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 GRIPAP1Q4V328 841 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 SCUBE3Q8IX30 993 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 SPIRE2Q8WWL2 714 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 ERO1AQ96HE7 468 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 CHMP4AQ9BY43 222 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 TM6SF1Q9BZW5 370 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 TTC12Q9H892 705 aaPredicted RBP7.66□□□□□ -1.18
TRIO-203ENST00000502490 DDX19AQ9NUU7 478 aaKnown RBP7.66□□□□□ -1.18
TRIO-203ENST00000502490 SALL3Q9BXA9 1300 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 NPATQ14207 1427 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 PXDNLA1KZ92 1463 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 DIP2CQ9Y2E4 1556 aa7.66□□□□□ -1.18
TRIO-203ENST00000502490 N4BP2Q86UW6 1770 aaPredicted RBP7.66□□□□□ -1.18
TRIO-203ENST00000502490 A0A0U1RQG5 324 aaPredicted RBP7.65□□□□□ -1.18
TRIO-203ENST00000502490 CHD2O14647 1828 aaKnown RBP7.65□□□□□ -1.18
TRIO-203ENST00000502490 CTAGE5O15320 804 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 CCP110O43303 1012 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 NRDCO43847 1150 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 RAB11FIP3O75154 756 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 TPM1P09493 284 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 SLFN14P0C7P3 912 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 U2AF2P26368 475 aaKnown RBP eCLIP7.65□□□□□ -1.188e-11■■■■■ 41
TRIO-203ENST00000502490 CHMLP26374 656 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 KCNJ6P48051 423 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 RBM6P78332 1123 aaKnown RBP7.65□□□□□ -1.18
TRIO-203ENST00000502490 BMS1Q14692 1282 aaKnown RBP7.65□□□□□ -1.18
TRIO-203ENST00000502490 MAP3K11Q16584 847 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 TEX35Q5T0J7 233 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 CTR9Q6PD62 1173 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 SARM1Q6SZW1 724 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 RBM43Q6ZSC3 357 aaKnown RBP7.65□□□□□ -1.18
TRIO-203ENST00000502490 NUTM1Q86Y26 1132 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 KIF18AQ8NI77 898 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 THAP11Q96EK4 314 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 LRRCC1Q9C099 1032 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 SCAND2PQ9GZW5 306 aaPredicted RBP7.65□□□□□ -1.18
TRIO-203ENST00000502490 TMEM51Q9NW97 253 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 SLC52A1Q9NWF4 448 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 LIMCH1Q9UPQ0 1083 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 SLC27A5Q9Y2P5 690 aa7.65□□□□□ -1.18
TRIO-203ENST00000502490 PTPRMP28827 1452 aa7.64□□□□□ -1.19
TRIO-203ENST00000502490 EDC4Q6P2E9 1401 aaKnown RBP7.64□□□□□ -1.19
TRIO-203ENST00000502490 YTHDC2Q9H6S0 1430 aaKnown RBP7.64□□□□□ -1.19
TRIO-203ENST00000502490 TNNT1P13805 278 aa7.64□□□□□ -1.19
TRIO-203ENST00000502490 GTF2E1P29083 439 aaPredicted RBP7.64□□□□□ -1.19
TRIO-203ENST00000502490 SRPK2P78362 688 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms