RNA–Protein interactions for RNA: ENST00000502330.5

SPOCK3-204, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPOCK3, Length 2,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-204ENST00000502330 ZNF589Q86UQ0 364 aaPredicted RBP23.95■■□□□ 1.42
SPOCK3-204ENST00000502330 FUCA2Q9BTY2 467 aa23.95■■□□□ 1.42
SPOCK3-204ENST00000502330 PKD1L3Q7Z443 1732 aa23.94■■□□□ 1.42
SPOCK3-204ENST00000502330 TOB2Q14106 344 aaPredicted RBP23.94■■□□□ 1.42
SPOCK3-204ENST00000502330 ELP1O95163 1332 aa23.94■■□□□ 1.42
SPOCK3-204ENST00000502330 CPDO75976 1380 aa23.93■■□□□ 1.42
SPOCK3-204ENST00000502330 TCHHQ07283 1943 aa23.93■■□□□ 1.42
SPOCK3-204ENST00000502330 VPS37CA5D8V6 355 aaPredicted RBP23.93■■□□□ 1.42
SPOCK3-204ENST00000502330 HAUS7Q99871 368 aa23.93■■□□□ 1.42
SPOCK3-204ENST00000502330 CABP4P57796 275 aa23.92■■□□□ 1.42
SPOCK3-204ENST00000502330 UBE3BQ7Z3V4 1068 aa23.92■■□□□ 1.42
SPOCK3-204ENST00000502330 DDX54Q8TDD1 881 aaKnown RBP23.92■■□□□ 1.42
SPOCK3-204ENST00000502330 TMEM94Q12767 1356 aa23.92■■□□□ 1.42
SPOCK3-204ENST00000502330 TNS3Q68CZ2 1445 aa23.92■■□□□ 1.42
SPOCK3-204ENST00000502330 A0A087WZG4 1122 aa23.92■■□□□ 1.42
SPOCK3-204ENST00000502330 KRT85P78386 507 aa23.92■■□□□ 1.42
SPOCK3-204ENST00000502330 U3KPZ7 1027 aaPredicted RBP23.92■■□□□ 1.42
SPOCK3-204ENST00000502330 H7C1W4 665 aa23.9■■□□□ 1.42
SPOCK3-204ENST00000502330 GPR108Q9NPR9 543 aa23.9■■□□□ 1.42
SPOCK3-204ENST00000502330 RRP9O43818 475 aaKnown RBP23.89■■□□□ 1.42
SPOCK3-204ENST00000502330 MCMDC2Q4G0Z9 681 aa23.89■■□□□ 1.42
SPOCK3-204ENST00000502330 PTMAP06454 111 aaKnown RBP23.89■■□□□ 1.41
SPOCK3-204ENST00000502330 TAF6LQ9Y6J9 622 aa23.89■■□□□ 1.41
SPOCK3-204ENST00000502330 PARP4Q9UKK3 1724 aaKnown RBP23.89■■□□□ 1.41
SPOCK3-204ENST00000502330 GLI3P10071 1580 aa23.88■■□□□ 1.41
SPOCK3-204ENST00000502330 COL9A3Q14050 684 aaPredicted RBP23.88■■□□□ 1.41
SPOCK3-204ENST00000502330 EDC3Q96F86 508 aaKnown RBP23.88■■□□□ 1.41
SPOCK3-204ENST00000502330 NEK1Q96PY6 1258 aa23.88■■□□□ 1.41
SPOCK3-204ENST00000502330 ARFGEF2Q9Y6D5 1785 aa23.88■■□□□ 1.41
SPOCK3-204ENST00000502330 KDM4AO75164 1064 aa23.88■■□□□ 1.41
SPOCK3-204ENST00000502330 HCLS1P14317 486 aaPredicted RBP23.88■■□□□ 1.41
SPOCK3-204ENST00000502330 CDC37L1Q7L3B6 337 aa23.88■■□□□ 1.41
SPOCK3-204ENST00000502330 CADPS2Q86UW7 1296 aa23.88■■□□□ 1.41
SPOCK3-204ENST00000502330 DBNDD2Q9BQY9 259 aa23.88■■□□□ 1.41
SPOCK3-204ENST00000502330 SCAND2PQ9GZW5 306 aaPredicted RBP23.88■■□□□ 1.41
SPOCK3-204ENST00000502330 SPATA31A3Q5VYP0 1347 aa23.87■■□□□ 1.41
SPOCK3-204ENST00000502330 LAMB4A4D0S4 1761 aa23.87■■□□□ 1.41
SPOCK3-204ENST00000502330 FOXO4P98177 505 aa23.87■■□□□ 1.41
SPOCK3-204ENST00000502330 ZNF609O15014 1411 aa23.86■■□□□ 1.41
SPOCK3-204ENST00000502330 ATP5J2-PTCD1G3V325 749 aa23.86■■□□□ 1.41
SPOCK3-204ENST00000502330 PTCD1O75127 700 aaKnown RBP23.86■■□□□ 1.41
SPOCK3-204ENST00000502330 TTC6Q86TZ1 520 aa23.86■■□□□ 1.41
SPOCK3-204ENST00000502330 KBTBD3Q8NAB2 608 aa23.86■■□□□ 1.41
SPOCK3-204ENST00000502330 JARID2Q92833 1246 aaPredicted RBP23.86■■□□□ 1.41
SPOCK3-204ENST00000502330 SH3TC1Q8TE82 1336 aa23.86■■□□□ 1.41
SPOCK3-204ENST00000502330 LMBR1LQ6UX01 489 aa23.86■■□□□ 1.41
SPOCK3-204ENST00000502330 DDX17Q92841 729 aaKnown RBP23.86■■□□□ 1.41
SPOCK3-204ENST00000502330 USP25Q9UHP3 1055 aa23.86■■□□□ 1.41
SPOCK3-204ENST00000502330 PIP4K2AP48426 406 aaPredicted RBP23.85■■□□□ 1.41
SPOCK3-204ENST00000502330 CHRNA2Q15822 529 aa23.85■■□□□ 1.41
SPOCK3-204ENST00000502330 GIMAP6Q6P9H5 292 aa23.85■■□□□ 1.41
SPOCK3-204ENST00000502330 CABLES1Q8TDN4 633 aa23.85■■□□□ 1.41
SPOCK3-204ENST00000502330 GTF3C6Q969F1 213 aa23.85■■□□□ 1.41
SPOCK3-204ENST00000502330 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.85■■□□□ 1.41
SPOCK3-204ENST00000502330 PALLDQ8WX93 1383 aa23.85■■□□□ 1.41
SPOCK3-204ENST00000502330 AFDNP55196 1824 aaKnown RBP23.85■■□□□ 1.41
SPOCK3-204ENST00000502330 ADCY5O95622 1261 aa23.85■■□□□ 1.41
SPOCK3-204ENST00000502330 HMGB1P09429 215 aaKnown RBP23.84■■□□□ 1.41
SPOCK3-204ENST00000502330 KIAA2012Q0VF49 1180 aa23.84■■□□□ 1.41
SPOCK3-204ENST00000502330 TCEANC2Q96MN5 208 aa23.84■■□□□ 1.41
SPOCK3-204ENST00000502330 HELLSQ9NRZ9 838 aa23.84■■□□□ 1.41
SPOCK3-204ENST00000502330 NBPF26B4DH59 902 aa23.84■■□□□ 1.41
SPOCK3-204ENST00000502330 CCDC192P0DO97 292 aa23.84■■□□□ 1.41
SPOCK3-204ENST00000502330 NBPF14Q5TI25 921 aa23.84■■□□□ 1.41
SPOCK3-204ENST00000502330 NBPF10Q6P3W6 841 aaKnown RBP23.84■■□□□ 1.41
SPOCK3-204ENST00000502330 NBPF15Q8N660 670 aa23.84■■□□□ 1.41
SPOCK3-204ENST00000502330 ERVV-2B6SEH9 535 aa23.83■■□□□ 1.41
SPOCK3-204ENST00000502330 ATG9AQ7Z3C6 839 aa23.83■■□□□ 1.41
SPOCK3-204ENST00000502330 DNAJC2Q99543 621 aaKnown RBP23.83■■□□□ 1.41
SPOCK3-204ENST00000502330 ATG3Q9NT62 314 aa23.83■■□□□ 1.41
SPOCK3-204ENST00000502330 CWC25Q9NXE8 425 aaPredicted RBP23.83■■□□□ 1.41
SPOCK3-204ENST00000502330 IL15P40933 162 aaPredicted RBP23.82■■□□□ 1.4
SPOCK3-204ENST00000502330 CYP21A2P08686 494 aa23.82■■□□□ 1.4
SPOCK3-204ENST00000502330 LLPHQ9BRT6 129 aaKnown RBP23.82■■□□□ 1.4
SPOCK3-204ENST00000502330 R3HCC1Q9Y3T6 440 aaKnown RBP23.82■■□□□ 1.4
SPOCK3-204ENST00000502330 PCDH11XQ9BZA7 1347 aa23.82■■□□□ 1.4
SPOCK3-204ENST00000502330 PCDH11YQ9BZA8 1340 aa23.82■■□□□ 1.4
SPOCK3-204ENST00000502330 HSP90AA2PQ14568 343 aaPredicted RBP23.81■■□□□ 1.4
SPOCK3-204ENST00000502330 DSCC1Q9BVC3 393 aa23.81■■□□□ 1.4
SPOCK3-204ENST00000502330 DTNBO60941 627 aa23.81■■□□□ 1.4
SPOCK3-204ENST00000502330 CCDC191Q8NCU4 936 aa23.81■■□□□ 1.4
SPOCK3-204ENST00000502330 NKX1-1Q15270 411 aaPredicted RBP23.8■■□□□ 1.4
SPOCK3-204ENST00000502330 Q6ZUG5 572 aa23.8■■□□□ 1.4
SPOCK3-204ENST00000502330 FERMT3Q86UX7 667 aa23.8■■□□□ 1.4
SPOCK3-204ENST00000502330 NUP62CLQ9H1M0 184 aa23.8■■□□□ 1.4
SPOCK3-204ENST00000502330 CIAO1O76071 339 aa23.79■■□□□ 1.4
SPOCK3-204ENST00000502330 MAP3K11Q16584 847 aa23.79■■□□□ 1.4
SPOCK3-204ENST00000502330 CCDC129Q6ZRS4 1044 aa23.79■■□□□ 1.4
SPOCK3-204ENST00000502330 DDX46Q7L014 1031 aaKnown RBP23.79■■□□□ 1.4
SPOCK3-204ENST00000502330 ZSCAN16Q9H4T2 348 aaPredicted RBP23.79■■□□□ 1.4
SPOCK3-204ENST00000502330 SMARCC2Q8TAQ2 1214 aa23.79■■□□□ 1.4
SPOCK3-204ENST00000502330 ZCRB1Q8TBF4 217 aaKnown RBP23.79■■□□□ 1.4
SPOCK3-204ENST00000502330 LEO1Q8WVC0 666 aaPredicted RBP23.79■■□□□ 1.4
SPOCK3-204ENST00000502330 SPATA32Q96LK8 384 aa23.79■■□□□ 1.4
SPOCK3-204ENST00000502330 SEC62Q99442 399 aaKnown RBP23.79■■□□□ 1.4
SPOCK3-204ENST00000502330 DDX19AQ9NUU7 478 aaKnown RBP23.79■■□□□ 1.4
SPOCK3-204ENST00000502330 PAG1Q9NWQ8 432 aa23.79■■□□□ 1.4
SPOCK3-204ENST00000502330 STK3Q13188 491 aa23.78■■□□□ 1.4
SPOCK3-204ENST00000502330 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.78■■□□□ 1.4
SPOCK3-204ENST00000502330 PIBF1Q8WXW3 757 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms