RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 TMX4Q9H1E5 349 aaPredicted RBP20.76■□□□□ 0.91
HDAC6-236ENST00000498808 LAMB2P55268 1798 aa20.75■□□□□ 0.91
HDAC6-236ENST00000498808 HUNKP57058 714 aa20.75■□□□□ 0.91
HDAC6-236ENST00000498808 DLK2Q6UY11 383 aa20.75■□□□□ 0.91
HDAC6-236ENST00000498808 PPP1R42Q7Z4L9 355 aa20.75■□□□□ 0.91
HDAC6-236ENST00000498808 PARP10Q53GL7 1025 aa20.74■□□□□ 0.91
HDAC6-236ENST00000498808 SLC10A5Q5PT55 438 aa20.74■□□□□ 0.91
HDAC6-236ENST00000498808 DPP8Q6V1X1 898 aaPredicted RBP20.74■□□□□ 0.91
HDAC6-236ENST00000498808 PNISRQ8TF01 805 aaKnown RBP20.74■□□□□ 0.91
HDAC6-236ENST00000498808 YDJCA8MPS7 323 aa20.73■□□□□ 0.91
HDAC6-236ENST00000498808 TNIP1Q15025 636 aa20.73■□□□□ 0.91
HDAC6-236ENST00000498808 USP48Q86UV5 1035 aa20.73■□□□□ 0.91
HDAC6-236ENST00000498808 SP8Q8IXZ3 490 aa20.73■□□□□ 0.91
HDAC6-236ENST00000498808 MPNDQ8N594 471 aa20.73■□□□□ 0.91
HDAC6-236ENST00000498808 CNOT7Q9UIV1 285 aaKnown RBP20.73■□□□□ 0.91
HDAC6-236ENST00000498808 DUOX1Q9NRD9 1551 aa20.72■□□□□ 0.91
HDAC6-236ENST00000498808 FAM155AB1AL88 458 aaPredicted RBP20.72■□□□□ 0.91
HDAC6-236ENST00000498808 PPP2R1AP30153 589 aa20.72■□□□□ 0.91
HDAC6-236ENST00000498808 LRP10Q7Z4F1 713 aa20.72■□□□□ 0.91
HDAC6-236ENST00000498808 ANKRD36CQ5JPF3 1778 aa20.72■□□□□ 0.91
HDAC6-236ENST00000498808 BBOX1O75936 387 aa20.71■□□□□ 0.91
HDAC6-236ENST00000498808 SOX10P56693 466 aa20.71■□□□□ 0.91
HDAC6-236ENST00000498808 MICALL2Q8IY33 904 aa20.71■□□□□ 0.91
HDAC6-236ENST00000498808 UTP14AQ9BVJ6 771 aaKnown RBP20.71■□□□□ 0.91
HDAC6-236ENST00000498808 ERBB4Q15303 1308 aa20.71■□□□□ 0.91
HDAC6-236ENST00000498808 THUMPD2Q9BTF0 503 aaKnown RBP20.7■□□□□ 0.9
HDAC6-236ENST00000498808 TAF1P21675 1872 aa20.7■□□□□ 0.9
HDAC6-236ENST00000498808 POLR2AP24928 1970 aaKnown RBP20.69■□□□□ 0.9
HDAC6-236ENST00000498808 H7C1D1 291 aa20.69■□□□□ 0.9
HDAC6-236ENST00000498808 RGMBQ6NW40 437 aa20.69■□□□□ 0.9
HDAC6-236ENST00000498808 SAGE1Q9NXZ1 904 aa20.69■□□□□ 0.9
HDAC6-236ENST00000498808 ZBTB12Q9Y330 459 aaPredicted RBP20.69■□□□□ 0.9
HDAC6-236ENST00000498808 LRRC37AA6NMS7 1700 aa20.68■□□□□ 0.9
HDAC6-236ENST00000498808 PDIA6Q15084 440 aa20.68■□□□□ 0.9
HDAC6-236ENST00000498808 SAMD7Q7Z3H4 446 aa20.68■□□□□ 0.9
HDAC6-236ENST00000498808 CCER1Q8TC90 406 aaPredicted RBP20.68■□□□□ 0.9
HDAC6-236ENST00000498808 GBA2Q9HCG7 927 aaPredicted RBP20.68■□□□□ 0.9
HDAC6-236ENST00000498808 EGFRP00533 1210 aa20.67■□□□□ 0.9
HDAC6-236ENST00000498808 HCLS1P14317 486 aaPredicted RBP20.67■□□□□ 0.9
HDAC6-236ENST00000498808 KIF23Q02241 960 aaPredicted RBP20.67■□□□□ 0.9
HDAC6-236ENST00000498808 DPF2Q92785 391 aa20.67■□□□□ 0.9
HDAC6-236ENST00000498808 GRAPQ13588 217 aa20.66■□□□□ 0.9
HDAC6-236ENST00000498808 PROSER3Q2NL68 480 aa20.66■□□□□ 0.9
HDAC6-236ENST00000498808 KRT26Q7Z3Y9 468 aa20.66■□□□□ 0.9
HDAC6-236ENST00000498808 GRAPLQ8TC17 118 aaPredicted RBP20.66■□□□□ 0.9
HDAC6-236ENST00000498808 RNF186Q9NXI6 227 aa20.66■□□□□ 0.9
HDAC6-236ENST00000498808 AKAP11Q9UKA4 1901 aa20.65■□□□□ 0.9
HDAC6-236ENST00000498808 ADM5C9JUS6 153 aa20.65■□□□□ 0.9
HDAC6-236ENST00000498808 PSMD14O00487 310 aa20.65■□□□□ 0.9
HDAC6-236ENST00000498808 TRPA1O75762 1119 aa20.65■□□□□ 0.9
HDAC6-236ENST00000498808 ANXA1P04083 346 aa20.65■□□□□ 0.9
HDAC6-236ENST00000498808 TBC1D10BQ4KMP7 808 aaPredicted RBP20.65■□□□□ 0.9
HDAC6-236ENST00000498808 DDX46Q7L014 1031 aaKnown RBP20.65■□□□□ 0.9
HDAC6-236ENST00000498808 NLRP10Q86W26 655 aa20.65■□□□□ 0.9
HDAC6-236ENST00000498808 CCDC102AQ96A19 550 aa20.65■□□□□ 0.9
HDAC6-236ENST00000498808 C2orf69Q8N8R5 385 aa20.64■□□□□ 0.89
HDAC6-236ENST00000498808 ZNF157P51786 506 aaPredicted RBP20.63■□□□□ 0.89
HDAC6-236ENST00000498808 PLEKHF1Q96S99 279 aa20.63■□□□□ 0.89
HDAC6-236ENST00000498808 DBNDD1Q9H9R9 158 aa20.63■□□□□ 0.89
HDAC6-236ENST00000498808 EIF2S2P20042 333 aaKnown RBP20.62■□□□□ 0.89
HDAC6-236ENST00000498808 NFE2L2Q16236 605 aa20.62■□□□□ 0.89
HDAC6-236ENST00000498808 PRPF38BQ5VTL8 546 aaKnown RBP20.62■□□□□ 0.89
HDAC6-236ENST00000498808 NEFMP07197 916 aa20.61■□□□□ 0.89
HDAC6-236ENST00000498808 SLC10A3P09131 477 aa20.61■□□□□ 0.89
HDAC6-236ENST00000498808 TMC4Q7Z404 712 aa20.61■□□□□ 0.89
HDAC6-236ENST00000498808 DCPSQ96C86 337 aaKnown RBP20.61■□□□□ 0.89
HDAC6-236ENST00000498808 CSRNP1Q96S65 589 aa20.61■□□□□ 0.89
HDAC6-236ENST00000498808 COL4A1P02462 1669 aa20.61■□□□□ 0.89
HDAC6-236ENST00000498808 RTL9Q8NET4 1388 aa20.6■□□□□ 0.89
HDAC6-236ENST00000498808 SH3TC1Q8TE82 1336 aa20.6■□□□□ 0.89
HDAC6-236ENST00000498808 WASHC4Q2M389 1173 aa20.6■□□□□ 0.89
HDAC6-236ENST00000498808 HSP90AB3PQ58FF7 597 aa20.6■□□□□ 0.89
HDAC6-236ENST00000498808 RBM26Q5T8P6 1007 aaKnown RBP20.6■□□□□ 0.89
HDAC6-236ENST00000498808 CTU1Q7Z7A3 348 aaKnown RBP20.6■□□□□ 0.89
HDAC6-236ENST00000498808 KCNQ5Q9NR82 932 aa20.6■□□□□ 0.89
HDAC6-236ENST00000498808 TRMT112Q9UI30 125 aaKnown RBP20.6■□□□□ 0.89
HDAC6-236ENST00000498808 DDX60Q8IY21 1712 aaKnown RBP20.6■□□□□ 0.89
HDAC6-236ENST00000498808 RIMBP2O15034 1052 aa20.59■□□□□ 0.89
HDAC6-236ENST00000498808 RPS12P25398 132 aaKnown RBP20.59■□□□□ 0.89
HDAC6-236ENST00000498808 COPS6Q7L5N1 327 aa20.59■□□□□ 0.89
HDAC6-236ENST00000498808 TSPYL4Q9UJ04 414 aa20.59■□□□□ 0.89
HDAC6-236ENST00000498808 ASTN2O75129 1339 aaPredicted RBP20.58■□□□□ 0.89
HDAC6-236ENST00000498808 SCN9AQ15858 1988 aa20.58■□□□□ 0.89
HDAC6-236ENST00000498808 TCIRG1Q13488 830 aa20.58■□□□□ 0.89
HDAC6-236ENST00000498808 XAGE3Q8WTP9 111 aa20.58■□□□□ 0.89
HDAC6-236ENST00000498808 CELF1Q92879 486 aaKnown RBP20.58■□□□□ 0.89
HDAC6-236ENST00000498808 GGA3Q9NZ52 723 aa20.58■□□□□ 0.89
HDAC6-236ENST00000498808 POLLQ9UGP5 575 aa20.58■□□□□ 0.89
HDAC6-236ENST00000498808 NSFL1CQ9UNZ2 370 aaKnown RBP20.58■□□□□ 0.89
HDAC6-236ENST00000498808 ECE2O60344 883 aa20.57■□□□□ 0.88
HDAC6-236ENST00000498808 AIMP1Q12904 312 aaKnown RBP20.57■□□□□ 0.88
HDAC6-236ENST00000498808 KIF4BQ2VIQ3 1234 aa20.57■□□□□ 0.88
HDAC6-236ENST00000498808 ZNF428Q96B54 188 aa20.57■□□□□ 0.88
HDAC6-236ENST00000498808 DOK7Q18PE1 504 aa20.56■□□□□ 0.88
HDAC6-236ENST00000498808 RASAL3Q86YV0 1011 aa20.56■□□□□ 0.88
HDAC6-236ENST00000498808 HPS5Q9UPZ3 1129 aa20.56■□□□□ 0.88
HDAC6-236ENST00000498808 C6orf229H3BNL8 230 aa20.55■□□□□ 0.88
HDAC6-236ENST00000498808 GPSM2P81274 684 aa20.55■□□□□ 0.88
HDAC6-236ENST00000498808 SULF1Q8IWU6 871 aa20.55■□□□□ 0.88
HDAC6-236ENST00000498808 NECTIN2Q92692 538 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms