RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 ZNF790Q6PG37 636 aa9.37□□□□□ -0.91
CHCHD3-206ENST00000496427 OLFM4Q6UX06 510 aa9.37□□□□□ -0.91
CHCHD3-206ENST00000496427 CNBD1Q8NA66 436 aa9.37□□□□□ -0.91
CHCHD3-206ENST00000496427 IL17REQ8NFR9 667 aa9.37□□□□□ -0.91
CHCHD3-206ENST00000496427 KIF7Q2M1P5 1343 aa9.36□□□□□ -0.91
CHCHD3-206ENST00000496427 PASKQ96RG2 1323 aa9.36□□□□□ -0.91
CHCHD3-206ENST00000496427 PRAMEF22A3QJZ6 481 aa9.36□□□□□ -0.91
CHCHD3-206ENST00000496427 U2SURPO15042 1029 aaKnown RBP9.36□□□□□ -0.91
CHCHD3-206ENST00000496427 SRGNP10124 158 aa9.36□□□□□ -0.91
CHCHD3-206ENST00000496427 PTPREP23469 700 aa9.36□□□□□ -0.91
CHCHD3-206ENST00000496427 IL6STP40189 918 aaPredicted RBP9.36□□□□□ -0.91
CHCHD3-206ENST00000496427 PTPN5P54829 565 aa9.36□□□□□ -0.91
CHCHD3-206ENST00000496427 ST5P78524 1137 aa9.36□□□□□ -0.91
CHCHD3-206ENST00000496427 DZIP3Q86Y13 1208 aaKnown RBP9.36□□□□□ -0.91
CHCHD3-206ENST00000496427 ZNF454Q8N9F8 522 aa9.36□□□□□ -0.91
CHCHD3-206ENST00000496427 TAF1P21675 1872 aa9.36□□□□□ -0.91
CHCHD3-206ENST00000496427 ANKRD36CQ5JPF3 1778 aa9.35□□□□□ -0.91
CHCHD3-206ENST00000496427 GOLGA8CPA6NN73 597 aa9.35□□□□□ -0.91
CHCHD3-206ENST00000496427 FAM177BA6PVY3 158 aa9.35□□□□□ -0.91
CHCHD3-206ENST00000496427 GNAT3A8MTJ3 354 aa9.35□□□□□ -0.91
CHCHD3-206ENST00000496427 EAPPQ56P03 285 aaPredicted RBP9.35□□□□□ -0.91
CHCHD3-206ENST00000496427 STYK1Q6J9G0 422 aa9.35□□□□□ -0.91
CHCHD3-206ENST00000496427 SETDB2Q96T68 719 aa9.35□□□□□ -0.91
CHCHD3-206ENST00000496427 TAF1DQ9H5J8 278 aaPredicted RBP9.35□□□□□ -0.91
CHCHD3-206ENST00000496427 RNF123Q5XPI4 1314 aa9.34□□□□□ -0.91
CHCHD3-206ENST00000496427 CASP8AP2Q9UKL3 1982 aa9.34□□□□□ -0.91
CHCHD3-206ENST00000496427 BHMG1C9JSJ3 638 aaPredicted RBP9.34□□□□□ -0.91
CHCHD3-206ENST00000496427 VEGFBP49765 207 aa9.34□□□□□ -0.91
CHCHD3-206ENST00000496427 THSD4Q6ZMP0 1018 aa9.34□□□□□ -0.91
CHCHD3-206ENST00000496427 LDHDQ86WU2 507 aa9.34□□□□□ -0.91
CHCHD3-206ENST00000496427 CNKSR1Q969H4 720 aa9.34□□□□□ -0.91
CHCHD3-206ENST00000496427 MASTLQ96GX5 879 aa9.34□□□□□ -0.91
CHCHD3-206ENST00000496427 FMNL2Q96PY5 1086 aa9.34□□□□□ -0.91
CHCHD3-206ENST00000496427 ZNF277Q9NRM2 450 aaPredicted RBP9.34□□□□□ -0.91
CHCHD3-206ENST00000496427 PDZRN3Q9UPQ7 1066 aa9.34□□□□□ -0.91
CHCHD3-206ENST00000496427 USP16Q9Y5T5 823 aa9.34□□□□□ -0.91
CHCHD3-206ENST00000496427 CEMIPQ8WUJ3 1361 aa9.34□□□□□ -0.91
CHCHD3-206ENST00000496427 CLSPNQ9HAW4 1339 aa9.33□□□□□ -0.92
CHCHD3-206ENST00000496427 CCDC93Q567U6 631 aa9.33□□□□□ -0.92
CHCHD3-206ENST00000496427 SLC51AQ86UW1 340 aa9.33□□□□□ -0.92
CHCHD3-206ENST00000496427 GAS2L2Q8NHY3 880 aa9.33□□□□□ -0.92
CHCHD3-206ENST00000496427 SNED1Q8TER0 1413 aa9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 POLR2AP24928 1970 aaKnown RBP9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 IQCA1LA6NCM1 817 aa9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 TMEM88BA6NKF7 163 aa9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 BTBD11A6QL63 1104 aa9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 PER1O15534 1290 aaPredicted RBP9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 ITGBL1O95965 494 aaPredicted RBP9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 LBX1P52954 281 aa9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 FOSBP53539 338 aa9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 FKBP4Q02790 459 aaKnown RBP eCLIP9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 SOGA3Q5TF21 947 aa9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 NPM2Q86SE8 214 aaKnown RBP9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 NBPF5PQ86XG9 351 aaPredicted RBP9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 MRPL50Q8N5N7 158 aaKnown RBP9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 C7orf43Q8WVR3 580 aa9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 PHACTR3Q96KR7 559 aa9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 TEX13AQ9BXU3 409 aaPredicted RBP9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 CRISPLD2Q9H0B8 497 aa9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 ABCC12Q96J65 1359 aa9.32□□□□□ -0.92
CHCHD3-206ENST00000496427 NPR1P16066 1061 aa9.31□□□□□ -0.92
CHCHD3-206ENST00000496427 PRKAR2BP31323 418 aa9.31□□□□□ -0.92
CHCHD3-206ENST00000496427 EPHX2P34913 555 aa9.31□□□□□ -0.92
CHCHD3-206ENST00000496427 CTCFP49711 727 aaPredicted RBP9.31□□□□□ -0.92
CHCHD3-206ENST00000496427 FMR1Q06787 632 aaKnown RBP eCLIP9.31□□□□□ -0.924e-8■■■■■ 32.4
CHCHD3-206ENST00000496427 MAP1SQ66K74 1059 aaPredicted RBP9.31□□□□□ -0.92
CHCHD3-206ENST00000496427 AIDAQ96BJ3 306 aa9.31□□□□□ -0.92
CHCHD3-206ENST00000496427 ZBED2Q9BTP6 218 aa9.31□□□□□ -0.92
CHCHD3-206ENST00000496427 IRX2Q9BZI1 471 aaPredicted RBP9.31□□□□□ -0.92
CHCHD3-206ENST00000496427 NBPF3Q9H094 633 aa9.31□□□□□ -0.92
CHCHD3-206ENST00000496427 PRDM10Q9NQV6 1147 aa9.31□□□□□ -0.92
CHCHD3-206ENST00000496427 HACL1Q9UJ83 578 aa9.31□□□□□ -0.92
CHCHD3-206ENST00000496427 NBPF26B4DH59 902 aa9.3□□□□□ -0.92
CHCHD3-206ENST00000496427 HSPA8P11142 646 aaKnown RBP9.3□□□□□ -0.92
CHCHD3-206ENST00000496427 IARSP41252 1262 aaKnown RBP9.3□□□□□ -0.92
CHCHD3-206ENST00000496427 DCTN1Q14203 1278 aa9.3□□□□□ -0.92
CHCHD3-206ENST00000496427 HLFQ16534 295 aa9.3□□□□□ -0.92
CHCHD3-206ENST00000496427 PPP1R15BQ5SWA1 713 aa9.3□□□□□ -0.92
CHCHD3-206ENST00000496427 NBPF10Q6P3W6 841 aaKnown RBP9.3□□□□□ -0.92
CHCHD3-206ENST00000496427 MCM10Q7L590 875 aa9.3□□□□□ -0.92
CHCHD3-206ENST00000496427 NBPF15Q8N660 670 aa9.3□□□□□ -0.92
CHCHD3-206ENST00000496427 WNT2BQ93097 391 aa9.3□□□□□ -0.92
CHCHD3-206ENST00000496427 RSPH6AQ9H0K4 717 aa9.3□□□□□ -0.92
CHCHD3-206ENST00000496427 NIP7Q9Y221 180 aaKnown RBP eCLIP9.3□□□□□ -0.92
CHCHD3-206ENST00000496427 SYNE4Q8N205 404 aa9.29□□□□□ -0.92
CHCHD3-206ENST00000496427 WBP1LQ9NX94 342 aa9.29□□□□□ -0.92
CHCHD3-206ENST00000496427 RASSF10A6NK89 507 aa9.28□□□□□ -0.92
CHCHD3-206ENST00000496427 PDE4AP27815 886 aa9.28□□□□□ -0.92
CHCHD3-206ENST00000496427 GRM1Q13255 1194 aa9.28□□□□□ -0.92
CHCHD3-206ENST00000496427 DEFB115Q30KQ5 88 aa9.28□□□□□ -0.92
CHCHD3-206ENST00000496427 FAM161AQ3B820 660 aa9.28□□□□□ -0.92
CHCHD3-206ENST00000496427 CLEC4GQ6UXB4 293 aa9.28□□□□□ -0.92
CHCHD3-206ENST00000496427 NUTM1Q86Y26 1132 aa9.28□□□□□ -0.92
CHCHD3-206ENST00000496427 CNTROBQ8N137 903 aa9.28□□□□□ -0.92
CHCHD3-206ENST00000496427 ABT1Q9ULW3 272 aaKnown RBP9.28□□□□□ -0.92
CHCHD3-206ENST00000496427 ZNF652Q9Y2D9 606 aa9.28□□□□□ -0.92
CHCHD3-206ENST00000496427 GJA3Q9Y6H8 435 aa9.28□□□□□ -0.92
CHCHD3-206ENST00000496427 WDR33Q9C0J8 1336 aaKnown RBP9.28□□□□□ -0.92
CHCHD3-206ENST00000496427 DDX60Q8IY21 1712 aaKnown RBP9.28□□□□□ -0.92
CHCHD3-206ENST00000496427 AKAP11Q9UKA4 1901 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms