RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, human

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORT1-208	ENST00000495777	RALBP1	Q15311	655 aa		11.51	□□□□□ -0.57
SORT1-208	ENST00000495777	MPND	Q8N594	471 aa		11.51	□□□□□ -0.57
SORT1-208	ENST00000495777	GRAPL	Q8TC17	118 aa	Predicted RBP	11.51	□□□□□ -0.57
SORT1-208	ENST00000495777	ZC3H15	Q8WU90	426 aa	Known RBP	11.51	□□□□□ -0.57
SORT1-208	ENST00000495777	SH3TC1	Q8TE82	1336 aa		11.51	□□□□□ -0.57
SORT1-208	ENST00000495777	DUOX1	Q9NRD9	1551 aa		11.5	□□□□□ -0.57
SORT1-208	ENST00000495777	ANP32C	O43423	234 aa		11.5	□□□□□ -0.57
SORT1-208	ENST00000495777	MAP2K2	P36507	400 aa		11.5	□□□□□ -0.57
SORT1-208	ENST00000495777	DIEXF	Q68CQ4	756 aa	Known RBP	11.5	□□□□□ -0.57
SORT1-208	ENST00000495777	CIAPIN1	Q6FI81	312 aa		11.5	□□□□□ -0.57
SORT1-208	ENST00000495777	CYP4F22	Q6NT55	531 aa		11.5	□□□□□ -0.57
SORT1-208	ENST00000495777	DDX46	Q7L014	1031 aa	Known RBP	11.5	□□□□□ -0.57
SORT1-208	ENST00000495777	TMC4	Q7Z404	712 aa		11.5	□□□□□ -0.57
SORT1-208	ENST00000495777	SAPCD2	Q86UD0	394 aa		11.5	□□□□□ -0.57
SORT1-208	ENST00000495777	HHIPL1	Q96JK4	782 aa		11.5	□□□□□ -0.57
SORT1-208	ENST00000495777	GPR101	Q96P66	508 aa	Predicted RBP	11.5	□□□□□ -0.57
SORT1-208	ENST00000495777	TRMT112	Q9UI30	125 aa	Known RBP	11.5	□□□□□ -0.57
SORT1-208	ENST00000495777	HOXB7	P09629	217 aa		11.49	□□□□□ -0.57
SORT1-208	ENST00000495777	HIRA	P54198	1017 aa	Predicted RBP	11.49	□□□□□ -0.57
SORT1-208	ENST00000495777	AIMP1	Q12904	312 aa	Known RBP	11.49	□□□□□ -0.57
SORT1-208	ENST00000495777	TNIP1	Q15025	636 aa		11.49	□□□□□ -0.57
SORT1-208	ENST00000495777	KRT24	Q2M2I5	525 aa		11.49	□□□□□ -0.57
SORT1-208	ENST00000495777	ABHD8	Q96I13	439 aa		11.49	□□□□□ -0.57
SORT1-208	ENST00000495777	YDJC	A8MPS7	323 aa		11.48	□□□□□ -0.57
SORT1-208	ENST00000495777	RAD17	O75943	681 aa		11.48	□□□□□ -0.57
SORT1-208	ENST00000495777	CELF2	O95319	508 aa	Known RBP	11.48	□□□□□ -0.57
SORT1-208	ENST00000495777	SF3B3	Q15393	1217 aa	Known RBP	11.48	□□□□□ -0.57
SORT1-208	ENST00000495777	PLBD2	Q8NHP8	589 aa		11.48	□□□□□ -0.57
SORT1-208	ENST00000495777	TRPM4	Q8TD43	1214 aa		11.48	□□□□□ -0.57
SORT1-208	ENST00000495777	NECTIN2	Q92692	538 aa		11.48	□□□□□ -0.57
SORT1-208	ENST00000495777	ISCA1	Q9BUE6	129 aa		11.48	□□□□□ -0.57
SORT1-208	ENST00000495777	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.48	□□□□□ -0.57
SORT1-208	ENST00000495777	CHPF2	Q9P2E5	772 aa		11.48	□□□□□ -0.57
SORT1-208	ENST00000495777	TRIM35	Q9UPQ4	493 aa		11.48	□□□□□ -0.57
SORT1-208	ENST00000495777	ANKRD36C	Q5JPF3	1778 aa		11.47	□□□□□ -0.57
SORT1-208	ENST00000495777	LRRC37A	A6NMS7	1700 aa		11.47	□□□□□ -0.57
SORT1-208	ENST00000495777	AOC2	O75106	756 aa		11.47	□□□□□ -0.57
SORT1-208	ENST00000495777	TRIM28	Q13263	835 aa	Known RBP	11.47	□□□□□ -0.57
SORT1-208	ENST00000495777	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.47	□□□□□ -0.57
SORT1-208	ENST00000495777	DPF2	Q92785	391 aa		11.47	□□□□□ -0.57
SORT1-208	ENST00000495777	BEGAIN	Q9BUH8	593 aa		11.47	□□□□□ -0.57
SORT1-208	ENST00000495777	LAMB2	P55268	1798 aa		11.46	□□□□□ -0.57
SORT1-208	ENST00000495777	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.46	□□□□□ -0.57
SORT1-208	ENST00000495777	SHTN1	A0MZ66	631 aa		11.46	□□□□□ -0.57
SORT1-208	ENST00000495777	CA12	O43570	354 aa		11.46	□□□□□ -0.57
SORT1-208	ENST00000495777	BRPF1	P55201	1214 aa	Predicted RBP	11.46	□□□□□ -0.57
SORT1-208	ENST00000495777	HDGFL1	Q5TGJ6	251 aa		11.46	□□□□□ -0.57
SORT1-208	ENST00000495777	ANKRD13D	Q6ZTN6	518 aa		11.46	□□□□□ -0.57
SORT1-208	ENST00000495777	CDC37L1	Q7L3B6	337 aa		11.46	□□□□□ -0.57
SORT1-208	ENST00000495777	CELF1	Q92879	486 aa	Known RBP	11.46	□□□□□ -0.57
SORT1-208	ENST00000495777	BCL2L13	Q9BXK5	485 aa		11.46	□□□□□ -0.57
SORT1-208	ENST00000495777	DBF4	Q9UBU7	674 aa	Predicted RBP	11.46	□□□□□ -0.57
SORT1-208	ENST00000495777	CNOT7	Q9UIV1	285 aa	Known RBP	11.46	□□□□□ -0.57
SORT1-208	ENST00000495777		H7C1D1	291 aa		11.45	□□□□□ -0.58
SORT1-208	ENST00000495777	GRM1	Q13255	1194 aa		11.45	□□□□□ -0.58
SORT1-208	ENST00000495777	MICALL2	Q8IY33	904 aa		11.45	□□□□□ -0.58
SORT1-208	ENST00000495777	CCDC146	Q8IYE0	955 aa		11.45	□□□□□ -0.58
SORT1-208	ENST00000495777	RUNDC1	Q96C34	613 aa		11.45	□□□□□ -0.58
SORT1-208	ENST00000495777	FAM89A	Q96GI7	184 aa		11.45	□□□□□ -0.58
SORT1-208	ENST00000495777	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.45	□□□□□ -0.58
SORT1-208	ENST00000495777	TRPM7	Q96QT4	1865 aa		11.44	□□□□□ -0.58
SORT1-208	ENST00000495777	PSMD14	O00487	310 aa		11.44	□□□□□ -0.58
SORT1-208	ENST00000495777	RPS12	P25398	132 aa	Known RBP	11.44	□□□□□ -0.58
SORT1-208	ENST00000495777	NEUROD2	Q15784	382 aa		11.44	□□□□□ -0.58
SORT1-208	ENST00000495777	WASHC4	Q2M389	1173 aa		11.44	□□□□□ -0.58
SORT1-208	ENST00000495777	CFAP44	Q96MT7	982 aa		11.44	□□□□□ -0.58
SORT1-208	ENST00000495777	HYPK	Q9NX55	129 aa		11.44	□□□□□ -0.58
SORT1-208	ENST00000495777	POLL	Q9UGP5	575 aa		11.44	□□□□□ -0.58
SORT1-208	ENST00000495777	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.44	□□□□□ -0.58
SORT1-208	ENST00000495777	RTL9	Q8NET4	1388 aa		11.43	□□□□□ -0.58
SORT1-208	ENST00000495777	COL4A1	P02462	1669 aa		11.43	□□□□□ -0.58
SORT1-208	ENST00000495777	ATP5J2-PTCD1	G3V325	749 aa		11.43	□□□□□ -0.58
SORT1-208	ENST00000495777	RGS19	P49795	217 aa		11.43	□□□□□ -0.58
SORT1-208	ENST00000495777	GPSM2	P81274	684 aa		11.43	□□□□□ -0.58
SORT1-208	ENST00000495777	NOG	Q13253	232 aa		11.43	□□□□□ -0.58
SORT1-208	ENST00000495777	DBNDD1	Q9H9R9	158 aa		11.43	□□□□□ -0.58
SORT1-208	ENST00000495777	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.43	□□□□□ -0.58
SORT1-208	ENST00000495777	DDX60	Q8IY21	1712 aa	Known RBP	11.43	□□□□□ -0.58
SORT1-208	ENST00000495777	IRS4	O14654	1257 aa	Predicted RBP	11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	ECE2	O60344	883 aa		11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	EGFR	P00533	1210 aa		11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	ZNF853	P0CG23	659 aa		11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	DUSP27	Q5VZP5	1158 aa		11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	SAMD7	Q7Z3H4	446 aa		11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	USP48	Q86UV5	1035 aa		11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	TBC1D16	Q8TBP0	767 aa		11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	ZNF428	Q96B54	188 aa		11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	EYA3	Q99504	573 aa		11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	ZNF408	Q9H9D4	720 aa		11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	PODXL2	Q9NZ53	605 aa		11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	TSKS	Q9UJT2	592 aa		11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	LAS1L	Q9Y4W2	734 aa	Known RBP	11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	ZNF609	O15014	1411 aa		11.42	□□□□□ -0.58
SORT1-208	ENST00000495777	C6orf229	H3BNL8	230 aa		11.41	□□□□□ -0.58
SORT1-208	ENST00000495777	HUNK	P57058	714 aa		11.41	□□□□□ -0.58
SORT1-208	ENST00000495777	RPS8	P62241	208 aa	Known RBP	11.41	□□□□□ -0.58
SORT1-208	ENST00000495777	WDR43	Q15061	677 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
SORT1-208	ENST00000495777	FAM161A	Q3B820	660 aa		11.41	□□□□□ -0.58
SORT1-208	ENST00000495777	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.41	□□□□□ -0.58
SORT1-208	ENST00000495777	DLK2	Q6UY11	383 aa		11.41	□□□□□ -0.58

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