RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	CNBD1	Q8NA66	436 aa		11.41	□□□□□ -0.58
PCDH15-223	ENST00000495484	NLRP3	Q96P20	1036 aa		11.41	□□□□□ -0.58
PCDH15-223	ENST00000495484	BCOR	Q6W2J9	1755 aa		11.41	□□□□□ -0.58
PCDH15-223	ENST00000495484	UBR3	Q6ZT12	1888 aa		11.41	□□□□□ -0.58
PCDH15-223	ENST00000495484	AFDN	P55196	1824 aa	Known RBP	11.41	□□□□□ -0.58
PCDH15-223	ENST00000495484	ANKRD36C	Q5JPF3	1778 aa		11.41	□□□□□ -0.58
PCDH15-223	ENST00000495484	SERPINB2	P05120	415 aa		11.4	□□□□□ -0.58
PCDH15-223	ENST00000495484	ST5	P78524	1137 aa		11.4	□□□□□ -0.58
PCDH15-223	ENST00000495484	SF3B3	Q15393	1217 aa	Known RBP	11.4	□□□□□ -0.58
PCDH15-223	ENST00000495484	TAF7L	Q5H9L4	462 aa		11.4	□□□□□ -0.58
PCDH15-223	ENST00000495484	SLC16A10	Q8TF71	515 aa		11.4	□□□□□ -0.58
PCDH15-223	ENST00000495484	LNPK	Q9C0E8	428 aa		11.4	□□□□□ -0.58
PCDH15-223	ENST00000495484	CIAO1	O76071	339 aa		11.4	□□□□□ -0.59
PCDH15-223	ENST00000495484	ITGA6	P23229	1130 aa		11.4	□□□□□ -0.59
PCDH15-223	ENST00000495484	RHPN1	Q8TCX5	695 aa		11.4	□□□□□ -0.59
PCDH15-223	ENST00000495484	PA2G4	Q9UQ80	394 aa	Known RBP	11.4	□□□□□ -0.59
PCDH15-223	ENST00000495484	RTL9	Q8NET4	1388 aa		11.39	□□□□□ -0.59
PCDH15-223	ENST00000495484	APBB1	O00213	710 aa		11.39	□□□□□ -0.59
PCDH15-223	ENST00000495484	POLRMT	O00411	1230 aa	Known RBP	11.39	□□□□□ -0.59
PCDH15-223	ENST00000495484	IL15	P40933	162 aa	Predicted RBP	11.39	□□□□□ -0.59
PCDH15-223	ENST00000495484	FAM161A	Q3B820	660 aa		11.39	□□□□□ -0.59
PCDH15-223	ENST00000495484	CLASRP	Q8N2M8	674 aa	Known RBP	11.39	□□□□□ -0.59
PCDH15-223	ENST00000495484	GREM2	Q9H772	168 aa		11.39	□□□□□ -0.59
PCDH15-223	ENST00000495484	PARP3	Q9Y6F1	533 aa		11.39	□□□□□ -0.59
PCDH15-223	ENST00000495484	EYA2	O00167	538 aa		11.38	□□□□□ -0.59
PCDH15-223	ENST00000495484	RGS3	P49796	1198 aa		11.38	□□□□□ -0.59
PCDH15-223	ENST00000495484	CDC5L	Q99459	802 aa	Known RBP	11.38	□□□□□ -0.59
PCDH15-223	ENST00000495484	SIL1	Q9H173	461 aa		11.38	□□□□□ -0.59
PCDH15-223	ENST00000495484	PRR5L	Q6MZQ0	368 aa		11.38	□□□□□ -0.59
PCDH15-223	ENST00000495484	C4A	P0C0L4	1744 aa		11.37	□□□□□ -0.59
PCDH15-223	ENST00000495484	RIC1	Q4ADV7	1423 aa		11.37	□□□□□ -0.59
PCDH15-223	ENST00000495484	DDR1	Q08345	913 aa		11.37	□□□□□ -0.59
PCDH15-223	ENST00000495484	LDHAL6A	Q6ZMR3	332 aa		11.37	□□□□□ -0.59
PCDH15-223	ENST00000495484	KLHDC4	Q8TBB5	520 aa		11.37	□□□□□ -0.59
PCDH15-223	ENST00000495484	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.37	□□□□□ -0.59
PCDH15-223	ENST00000495484	SMARCA5	O60264	1052 aa	Predicted RBP	11.36	□□□□□ -0.59
PCDH15-223	ENST00000495484	MMP10	P09238	476 aa		11.36	□□□□□ -0.59
PCDH15-223	ENST00000495484	PDE4A	P27815	886 aa		11.36	□□□□□ -0.59
PCDH15-223	ENST00000495484	IGHMBP2	P38935	993 aa	Known RBP	11.36	□□□□□ -0.59
PCDH15-223	ENST00000495484	MPHOSPH8	Q99549	860 aa		11.36	□□□□□ -0.59
PCDH15-223	ENST00000495484	GPR108	Q9NPR9	543 aa		11.36	□□□□□ -0.59
PCDH15-223	ENST00000495484	ABCC12	Q96J65	1359 aa		11.36	□□□□□ -0.59
PCDH15-223	ENST00000495484	SASH1	O94885	1247 aa		11.36	□□□□□ -0.59
PCDH15-223	ENST00000495484	DDX46	Q7L014	1031 aa	Known RBP	11.36	□□□□□ -0.59
PCDH15-223	ENST00000495484	ZNF594	Q96JF6	807 aa	Predicted RBP	11.36	□□□□□ -0.59
PCDH15-223	ENST00000495484	BRIP1	Q9BX63	1249 aa		11.36	□□□□□ -0.59
PCDH15-223	ENST00000495484	CNNM1	Q9NRU3	951 aa		11.36	□□□□□ -0.59
PCDH15-223	ENST00000495484	CEP126	Q9P2H0	1117 aa		11.36	□□□□□ -0.59
PCDH15-223	ENST00000495484	IFIT2	P09913	472 aa	Known RBP	11.35	□□□□□ -0.59
PCDH15-223	ENST00000495484	ATG9A	Q7Z3C6	839 aa		11.35	□□□□□ -0.59
PCDH15-223	ENST00000495484	ANKRD18A	Q8IVF6	992 aa		11.35	□□□□□ -0.59
PCDH15-223	ENST00000495484	GPATCH3	Q96I76	525 aa		11.35	□□□□□ -0.59
PCDH15-223	ENST00000495484	IL1RAPL2	Q9NP60	686 aa		11.35	□□□□□ -0.59
PCDH15-223	ENST00000495484	AKAP2	Q9Y2D5	859 aa		11.35	□□□□□ -0.59
PCDH15-223	ENST00000495484	COL24A1	Q17RW2	1714 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	KLRG2	A4D1S0	409 aa	Predicted RBP	11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	TFCP2	Q12800	502 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	PLEKHM2	Q8IWE5	1019 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	OSBPL3	Q9H4L5	887 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	RIPOR2	Q9Y4F9	1068 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	MROH5	Q6ZUA9	1318 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	MX1	P20591	662 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	PDE6B	P35913	854 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	CRY2	Q49AN0	593 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	LRRC24	Q50LG9	513 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	MSL1	Q68DK7	614 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	C3orf67	Q6ZVT6	689 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	SKAP1	Q86WV1	359 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	RPGR	Q92834	1020 aa	Known RBP	11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	RBM17	Q96I25	401 aa	Known RBP	11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	BCL11A	Q9H165	835 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	SEC31B	Q9NQW1	1179 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	BSDC1	Q9NW68	430 aa	Predicted RBP	11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	STAP2	Q9UGK3	403 aa		11.34	□□□□□ -0.59
PCDH15-223	ENST00000495484	AOX1	Q06278	1338 aa		11.33	□□□□□ -0.6
PCDH15-223	ENST00000495484	PDE1A	P54750	535 aa		11.33	□□□□□ -0.6
PCDH15-223	ENST00000495484	RPS8	P62241	208 aa	Known RBP	11.33	□□□□□ -0.6
PCDH15-223	ENST00000495484	METTL24	Q5JXM2	366 aa		11.33	□□□□□ -0.6
PCDH15-223	ENST00000495484	AACS	Q86V21	672 aa		11.33	□□□□□ -0.6
PCDH15-223	ENST00000495484	CCDC24	Q8N4L8	307 aa		11.33	□□□□□ -0.6
PCDH15-223	ENST00000495484	PUS3	Q9BZE2	481 aa	Known RBP	11.33	□□□□□ -0.6
PCDH15-223	ENST00000495484	ERC2	O15083	957 aa		11.32	□□□□□ -0.6
PCDH15-223	ENST00000495484	TNNI3K	Q59H18	835 aa		11.32	□□□□□ -0.6
PCDH15-223	ENST00000495484	BMP2KL	Q5H9B9	411 aa		11.32	□□□□□ -0.6
PCDH15-223	ENST00000495484	FPGT-TNNI3K	V9GXZ4	949 aa		11.32	□□□□□ -0.6
PCDH15-223	ENST00000495484	TTC41P	Q6P2S7	1318 aa		11.32	□□□□□ -0.6
PCDH15-223	ENST00000495484	BBOX1	O75936	387 aa		11.32	□□□□□ -0.6
PCDH15-223	ENST00000495484	HOXA10	P31260	410 aa	Predicted RBP	11.32	□□□□□ -0.6
PCDH15-223	ENST00000495484	GRAP	Q13588	217 aa		11.32	□□□□□ -0.6
PCDH15-223	ENST00000495484	GRAPL	Q8TC17	118 aa	Predicted RBP	11.32	□□□□□ -0.6
PCDH15-223	ENST00000495484	EAF2	Q96CJ1	260 aa	Predicted RBP	11.32	□□□□□ -0.6
PCDH15-223	ENST00000495484	MTFR1L	Q9H019	292 aa		11.32	□□□□□ -0.6
PCDH15-223	ENST00000495484	QSER1	Q2KHR3	1735 aa		11.31	□□□□□ -0.6
PCDH15-223	ENST00000495484	SALL3	Q9BXA9	1300 aa		11.31	□□□□□ -0.6
PCDH15-223	ENST00000495484	PDE8B	O95263	885 aa		11.31	□□□□□ -0.6
PCDH15-223	ENST00000495484	TMC4	Q7Z404	712 aa		11.31	□□□□□ -0.6
PCDH15-223	ENST00000495484	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.31	□□□□□ -0.6
PCDH15-223	ENST00000495484	CRAMP1	Q96RY5	1269 aa		11.31	□□□□□ -0.6
PCDH15-223	ENST00000495484	ECHDC1	Q9NTX5	307 aa		11.31	□□□□□ -0.6

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