RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 CCDC183Q5T5S1 534 aa11.62□□□□□ -0.55
TSC1-207ENST00000493467 VPS53Q5VIR6 699 aa11.62□□□□□ -0.55
TSC1-207ENST00000493467 SH2B1Q9NRF2 756 aaPredicted RBP11.62□□□□□ -0.55
TSC1-207ENST00000493467 ATP6V1DQ9Y5K8 247 aa11.62□□□□□ -0.55
TSC1-207ENST00000493467 MST1RQ04912 1400 aa11.61□□□□□ -0.55
TSC1-207ENST00000493467 KIF1AQ12756 1690 aa11.61□□□□□ -0.55
TSC1-207ENST00000493467 TCHHQ07283 1943 aa11.61□□□□□ -0.55
TSC1-207ENST00000493467 GIGYF1O75420 1035 aaPredicted RBP11.61□□□□□ -0.55
TSC1-207ENST00000493467 F13A1P00488 732 aa11.61□□□□□ -0.55
TSC1-207ENST00000493467 CSPP1Q1MSJ5 1256 aa11.61□□□□□ -0.55
TSC1-207ENST00000493467 CWC27Q6UX04 472 aaKnown RBP11.61□□□□□ -0.55
TSC1-207ENST00000493467 EVI5LQ96CN4 794 aa11.61□□□□□ -0.55
TSC1-207ENST00000493467 GDPD2Q9HCC8 539 aa11.61□□□□□ -0.55
TSC1-207ENST00000493467 HYPKQ9NX55 129 aa11.61□□□□□ -0.55
TSC1-207ENST00000493467 IVNS1ABPQ9Y6Y0 642 aa11.61□□□□□ -0.55
TSC1-207ENST00000493467 C5P01031 1676 aa11.61□□□□□ -0.55
TSC1-207ENST00000493467 HIP1O00291 1037 aa11.6□□□□□ -0.55
TSC1-207ENST00000493467 SYT1P21579 422 aa11.6□□□□□ -0.55
TSC1-207ENST00000493467 UBE2HP62256 183 aa11.6□□□□□ -0.55
TSC1-207ENST00000493467 OS9Q13438 667 aaPredicted RBP11.6□□□□□ -0.55
TSC1-207ENST00000493467 ARHGEF25Q86VW2 580 aa11.6□□□□□ -0.55
TSC1-207ENST00000493467 ZSWIM6Q9HCJ5 1215 aa11.6□□□□□ -0.55
TSC1-207ENST00000493467 SMC3Q9UQE7 1217 aa11.6□□□□□ -0.55
TSC1-207ENST00000493467 MAP3K2Q9Y2U5 619 aa11.6□□□□□ -0.55
TSC1-207ENST00000493467 SCN11AQ9UI33 1791 aa11.6□□□□□ -0.55
TSC1-207ENST00000493467 JCADQ9P266 1359 aa11.6□□□□□ -0.55
TSC1-207ENST00000493467 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.6□□□□□ -0.55
TSC1-207ENST00000493467 C1orf141Q5JVX7 400 aa11.6□□□□□ -0.55
TSC1-207ENST00000493467 SPG7Q9UQ90 795 aa11.6□□□□□ -0.55
TSC1-207ENST00000493467 CCDC171Q6TFL3 1326 aa11.6□□□□□ -0.55
TSC1-207ENST00000493467 ANXA1P04083 346 aa11.59□□□□□ -0.55
TSC1-207ENST00000493467 CASTP20810 708 aaKnown RBP11.59□□□□□ -0.55
TSC1-207ENST00000493467 HSP90AA2PQ14568 343 aaPredicted RBP11.59□□□□□ -0.55
TSC1-207ENST00000493467 MPRIPQ6WCQ1 1025 aa11.59□□□□□ -0.55
TSC1-207ENST00000493467 LINS1Q8NG48 757 aa11.59□□□□□ -0.55
TSC1-207ENST00000493467 GLMNQ92990 594 aa11.59□□□□□ -0.55
TSC1-207ENST00000493467 LRRC59Q96AG4 307 aaKnown RBP11.59□□□□□ -0.55
TSC1-207ENST00000493467 C9orf78Q9NZ63 289 aaPredicted RBP11.59□□□□□ -0.55
TSC1-207ENST00000493467 IFIT2P09913 472 aaKnown RBP11.59□□□□□ -0.55
TSC1-207ENST00000493467 PTH1RQ03431 593 aa11.59□□□□□ -0.55
TSC1-207ENST00000493467 NECTIN1Q15223 517 aa11.59□□□□□ -0.55
TSC1-207ENST00000493467 CNPY2Q9Y2B0 182 aa11.59□□□□□ -0.55
TSC1-207ENST00000493467 PLEKHG2Q9H7P9 1386 aa11.58□□□□□ -0.56
TSC1-207ENST00000493467 PATL2C9JE40 543 aaKnown RBP11.58□□□□□ -0.56
TSC1-207ENST00000493467 LARGE1O95461 756 aa11.58□□□□□ -0.56
TSC1-207ENST00000493467 PSME1Q06323 249 aa11.58□□□□□ -0.56
TSC1-207ENST00000493467 PROSER3Q2NL68 480 aa11.58□□□□□ -0.56
TSC1-207ENST00000493467 RNF214Q8ND24 703 aa11.58□□□□□ -0.56
TSC1-207ENST00000493467 PDRG1Q9NUG6 133 aa11.58□□□□□ -0.56
TSC1-207ENST00000493467 CYP46A1Q9Y6A2 500 aa11.58□□□□□ -0.56
TSC1-207ENST00000493467 SETD1BQ9UPS6 1966 aaKnown RBP11.58□□□□□ -0.56
TSC1-207ENST00000493467 ALS2Q96Q42 1657 aa11.58□□□□□ -0.56
TSC1-207ENST00000493467 GRM8O00222 908 aa11.58□□□□□ -0.56
TSC1-207ENST00000493467 DDX58O95786 925 aaKnown RBP11.58□□□□□ -0.56
TSC1-207ENST00000493467 OSBPP22059 807 aa11.58□□□□□ -0.56
TSC1-207ENST00000493467 ANKLE2Q86XL3 938 aa11.58□□□□□ -0.56
TSC1-207ENST00000493467 JAKMIP1Q96N16 626 aaKnown RBP11.58□□□□□ -0.56
TSC1-207ENST00000493467 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.58□□□□□ -0.56
TSC1-207ENST00000493467 ALDH8A1Q9H2A2 487 aaPredicted RBP11.58□□□□□ -0.56
TSC1-207ENST00000493467 GPHNQ9NQX3 736 aaPredicted RBP11.58□□□□□ -0.56
TSC1-207ENST00000493467 DDX21Q9NR30 783 aaKnown RBP eCLIP11.58□□□□□ -0.56
TSC1-207ENST00000493467 MTMR6Q9Y217 621 aa11.58□□□□□ -0.56
TSC1-207ENST00000493467 MED23Q9ULK4 1368 aa11.57□□□□□ -0.56
TSC1-207ENST00000493467 PRPF40BQ6NWY9 871 aaKnown RBP11.57□□□□□ -0.56
TSC1-207ENST00000493467 SUCLG2Q96I99 432 aa11.57□□□□□ -0.56
TSC1-207ENST00000493467 NPHP4O75161 1426 aaPredicted RBP11.57□□□□□ -0.56
TSC1-207ENST00000493467 SASH1O94885 1247 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 GCP02774 474 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 RFX1P22670 979 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 GJB2P29033 226 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 ST3GAL1Q11201 340 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 ADCK5Q3MIX3 580 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 ESCO1Q5FWF5 840 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 AACSQ86V21 672 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 ANKRD24Q8TF21 1146 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 MAP4K1Q92918 833 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 KAZALD1Q96I82 304 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 FUCA2Q9BTY2 467 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 IGSF5Q9NSI5 407 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 PA2G4Q9UQ80 394 aaKnown RBP11.56□□□□□ -0.56
TSC1-207ENST00000493467 RFX7Q2KHR2 1363 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 RGPD5Q99666 1765 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 ZKSCAN1P17029 563 aaPredicted RBP11.56□□□□□ -0.56
TSC1-207ENST00000493467 XPCQ01831 940 aaPredicted RBP11.56□□□□□ -0.56
TSC1-207ENST00000493467 CWF19L2Q2TBE0 894 aaKnown RBP11.56□□□□□ -0.56
TSC1-207ENST00000493467 CREB3L3Q68CJ9 461 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 CCDC83Q8IWF9 413 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 RBM8AQ9Y5S9 174 aaKnown RBP11.56□□□□□ -0.56
TSC1-207ENST00000493467 COL15A1P39059 1388 aa11.56□□□□□ -0.56
TSC1-207ENST00000493467 KDM4FA0A1W2PPD8 638 aa11.55□□□□□ -0.56
TSC1-207ENST00000493467 CPA1P15085 419 aa11.55□□□□□ -0.56
TSC1-207ENST00000493467 G3BP1Q13283 466 aaKnown RBP eCLIP11.55□□□□□ -0.56
TSC1-207ENST00000493467 FOXD4L6Q3SYB3 417 aaPredicted RBP11.55□□□□□ -0.56
TSC1-207ENST00000493467 FOXD4L3Q6VB84 417 aaPredicted RBP11.55□□□□□ -0.56
TSC1-207ENST00000493467 SND1Q7KZF4 910 aaKnown RBP eCLIP11.55□□□□□ -0.56
TSC1-207ENST00000493467 PSMA5P28066 241 aa11.55□□□□□ -0.56
TSC1-207ENST00000493467 PDE4CQ08493 712 aa11.55□□□□□ -0.56
TSC1-207ENST00000493467 NMIQ13287 307 aaPredicted RBP11.55□□□□□ -0.56
TSC1-207ENST00000493467 DSG2Q14126 1118 aa11.55□□□□□ -0.56
TSC1-207ENST00000493467 EAF2Q96CJ1 260 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms