RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 DDX60Q8IY21 1712 aaKnown RBP10.24□□□□□ -0.77
TM4SF1-204ENST00000493348 GRM8O00222 908 aa10.24□□□□□ -0.77
TM4SF1-204ENST00000493348 BCAR3O75815 825 aa10.24□□□□□ -0.77
TM4SF1-204ENST00000493348 PRPF40BQ6NWY9 871 aaKnown RBP10.24□□□□□ -0.77
TM4SF1-204ENST00000493348 ATF7IPQ6VMQ6 1270 aa10.24□□□□□ -0.77
TM4SF1-204ENST00000493348 RCAN3Q9UKA8 241 aa10.24□□□□□ -0.77
TM4SF1-204ENST00000493348 CDHR2Q9BYE9 1310 aa10.24□□□□□ -0.77
TM4SF1-204ENST00000493348 TNRC6CQ9HCJ0 1690 aaKnown RBP10.24□□□□□ -0.77
TM4SF1-204ENST00000493348 KLRG2A4D1S0 409 aaPredicted RBP10.23□□□□□ -0.77
TM4SF1-204ENST00000493348 PPEF1O14829 653 aaPredicted RBP10.23□□□□□ -0.77
TM4SF1-204ENST00000493348 C21orf2O43822 256 aa10.23□□□□□ -0.77
TM4SF1-204ENST00000493348 KCNA3P22001 575 aa10.23□□□□□ -0.77
TM4SF1-204ENST00000493348 CRY2Q49AN0 593 aa10.23□□□□□ -0.77
TM4SF1-204ENST00000493348 TAF7LQ5H9L4 462 aa10.23□□□□□ -0.77
TM4SF1-204ENST00000493348 TMC4Q7Z404 712 aa10.23□□□□□ -0.77
TM4SF1-204ENST00000493348 SYNE4Q8N205 404 aa10.23□□□□□ -0.77
TM4SF1-204ENST00000493348 JARID2Q92833 1246 aaPredicted RBP10.23□□□□□ -0.77
TM4SF1-204ENST00000493348 CRAMP1Q96RY5 1269 aa10.23□□□□□ -0.77
TM4SF1-204ENST00000493348 SLX4Q8IY92 1834 aa10.23□□□□□ -0.77
TM4SF1-204ENST00000493348 H7C1W4 665 aa10.22□□□□□ -0.77
TM4SF1-204ENST00000493348 BBOX1O75936 387 aa10.22□□□□□ -0.77
TM4SF1-204ENST00000493348 YBX3P16989 372 aaKnown RBP eCLIP10.22□□□□□ -0.772e-7■□□□□ 9.7
TM4SF1-204ENST00000493348 CTSWP56202 376 aa10.22□□□□□ -0.77
TM4SF1-204ENST00000493348 GRAPQ13588 217 aa10.22□□□□□ -0.77
TM4SF1-204ENST00000493348 GRIPAP1Q4V328 841 aa10.22□□□□□ -0.77
TM4SF1-204ENST00000493348 CCDC93Q567U6 631 aa10.22□□□□□ -0.77
TM4SF1-204ENST00000493348 CC2D2BQ6DHV5 1058 aa10.22□□□□□ -0.77
TM4SF1-204ENST00000493348 SAMD1Q6SPF0 538 aaPredicted RBP10.22□□□□□ -0.77
TM4SF1-204ENST00000493348 RTKN2Q8IZC4 609 aa10.22□□□□□ -0.77
TM4SF1-204ENST00000493348 GRAPLQ8TC17 118 aaPredicted RBP10.22□□□□□ -0.77
TM4SF1-204ENST00000493348 CLUAP1Q96AJ1 413 aa10.22□□□□□ -0.77
TM4SF1-204ENST00000493348 CCDC85AQ96PX6 553 aaPredicted RBP10.22□□□□□ -0.77
TM4SF1-204ENST00000493348 CDC5LQ99459 802 aaKnown RBP10.22□□□□□ -0.77
TM4SF1-204ENST00000493348 CCDC88AQ3V6T2 1871 aa10.21□□□□□ -0.77
TM4SF1-204ENST00000493348 ZBTB22O15209 634 aa10.21□□□□□ -0.77
TM4SF1-204ENST00000493348 GNAI3P08754 354 aa10.21□□□□□ -0.77
TM4SF1-204ENST00000493348 UBTFL1P0CB47 393 aaPredicted RBP10.21□□□□□ -0.77
TM4SF1-204ENST00000493348 HOXA10P31260 410 aaPredicted RBP10.21□□□□□ -0.77
TM4SF1-204ENST00000493348 IGHMBP2P38935 993 aaKnown RBP10.21□□□□□ -0.77
TM4SF1-204ENST00000493348 SF3B3Q15393 1217 aaKnown RBP10.21□□□□□ -0.77
TM4SF1-204ENST00000493348 ANKRD18AQ8IVF6 992 aa10.21□□□□□ -0.77
TM4SF1-204ENST00000493348 DZIP1LQ8IYY4 767 aaKnown RBP10.21□□□□□ -0.77
TM4SF1-204ENST00000493348 MPHOSPH8Q99549 860 aa10.21□□□□□ -0.77
TM4SF1-204ENST00000493348 ABCC4O15439 1325 aa10.21□□□□□ -0.78
TM4SF1-204ENST00000493348 GOLGB1Q14789 3259 aaKnown RBP10.2□□□□□ -0.78
TM4SF1-204ENST00000493348 ANKRD18BA2A2Z9 1011 aa10.2□□□□□ -0.78
TM4SF1-204ENST00000493348 TRIM27P14373 513 aa10.2□□□□□ -0.78
TM4SF1-204ENST00000493348 TAF1P21675 1872 aa10.2□□□□□ -0.78
TM4SF1-204ENST00000493348 IFIT5Q13325 482 aaKnown RBP10.2□□□□□ -0.78
TM4SF1-204ENST00000493348 CCDC57Q2TAC2 916 aa10.2□□□□□ -0.78
TM4SF1-204ENST00000493348 ITPRIPQ8IWB1 547 aa10.2□□□□□ -0.78
TM4SF1-204ENST00000493348 SPEF2Q9C093 1822 aa10.2□□□□□ -0.78
TM4SF1-204ENST00000493348 TAOK3Q9H2K8 898 aa10.2□□□□□ -0.78
TM4SF1-204ENST00000493348 CHMP4BQ9H444 224 aaKnown RBP10.2□□□□□ -0.78
TM4SF1-204ENST00000493348 RPS8P62241 208 aaKnown RBP10.19□□□□□ -0.78
TM4SF1-204ENST00000493348 C3orf67Q6ZVT6 689 aa10.19□□□□□ -0.78
TM4SF1-204ENST00000493348 SUPT20HQ8NEM7 779 aa10.19□□□□□ -0.78
TM4SF1-204ENST00000493348 PLA2G12BQ9BX93 195 aa10.19□□□□□ -0.78
TM4SF1-204ENST00000493348 ANKIB1Q9P2G1 1089 aa10.19□□□□□ -0.78
TM4SF1-204ENST00000493348 G3V3G9 751 aa10.18□□□□□ -0.78
TM4SF1-204ENST00000493348 ITGA6P23229 1130 aa10.18□□□□□ -0.78
TM4SF1-204ENST00000493348 YY1P25490 414 aa10.18□□□□□ -0.78
TM4SF1-204ENST00000493348 DCAF8Q5TAQ9 597 aa10.18□□□□□ -0.78
TM4SF1-204ENST00000493348 INTS3Q68E01 1043 aaKnown RBP10.18□□□□□ -0.78
TM4SF1-204ENST00000493348 LMBR1LQ6UX01 489 aa10.18□□□□□ -0.78
TM4SF1-204ENST00000493348 DPP8Q6V1X1 898 aaPredicted RBP10.18□□□□□ -0.78
TM4SF1-204ENST00000493348 SP8Q8IXZ3 490 aa10.18□□□□□ -0.78
TM4SF1-204ENST00000493348 TTLL11Q8NHH1 800 aa10.18□□□□□ -0.78
TM4SF1-204ENST00000493348 ATP6V0A2Q9Y487 856 aa10.18□□□□□ -0.78
TM4SF1-204ENST00000493348 FER1L6Q2WGJ9 1857 aa10.18□□□□□ -0.78
TM4SF1-204ENST00000493348 SBF1O95248 1867 aa10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 NBPF7P0C2Y1 421 aaPredicted RBP10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 LMNB1P20700 586 aa10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 FKBP4Q02790 459 aaKnown RBP eCLIP10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 MPNDQ8N594 471 aa10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 TMEM57Q8N5G2 664 aa10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 JDP2Q8WYK2 163 aa10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 CELF1Q92879 486 aaKnown RBP10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 SUCLG2Q96I99 432 aa10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 EYA3Q99504 573 aa10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 GREM2Q9H772 168 aa10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 SEC31BQ9NQW1 1179 aa10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 RNF181Q9P0P0 153 aa10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 NSFL1CQ9UNZ2 370 aaKnown RBP10.17□□□□□ -0.78
TM4SF1-204ENST00000493348 RTL9Q8NET4 1388 aa10.16□□□□□ -0.78
TM4SF1-204ENST00000493348 UTYO14607 1347 aa10.16□□□□□ -0.78
TM4SF1-204ENST00000493348 DICER1Q9UPY3 1922 aaKnown RBP10.16□□□□□ -0.78
TM4SF1-204ENST00000493348 C6orf229H3BNL8 230 aa10.16□□□□□ -0.78
TM4SF1-204ENST00000493348 GNAI2P04899 355 aa10.16□□□□□ -0.78
TM4SF1-204ENST00000493348 KCNJ4P48050 445 aa10.16□□□□□ -0.78
TM4SF1-204ENST00000493348 CASP7P55210 303 aa10.16□□□□□ -0.78
TM4SF1-204ENST00000493348 RASSF7Q02833 373 aa10.16□□□□□ -0.78
TM4SF1-204ENST00000493348 FAM161AQ3B820 660 aa10.16□□□□□ -0.78
TM4SF1-204ENST00000493348 C9orf131Q5VYM1 1079 aa10.16□□□□□ -0.78
TM4SF1-204ENST00000493348 USP44Q9H0E7 712 aa10.16□□□□□ -0.78
TM4SF1-204ENST00000493348 BICC1Q9H694 974 aaKnown RBP10.16□□□□□ -0.78
TM4SF1-204ENST00000493348 CNNM1Q9NRU3 951 aa10.16□□□□□ -0.78
TM4SF1-204ENST00000493348 UTRNP46939 3433 aa10.15□□□□□ -0.78
TM4SF1-204ENST00000493348 PLIN1O60240 522 aa10.15□□□□□ -0.78
TM4SF1-204ENST00000493348 CSF1RP07333 972 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms