RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 ECE1P42892 770 aa18.01■□□□□ 0.47
SAMM50-204ENST00000493161 MPNDQ8N594 471 aa18.01■□□□□ 0.47
SAMM50-204ENST00000493161 SUPT20HQ8NEM7 779 aa18.01■□□□□ 0.47
SAMM50-204ENST00000493161 TMX4Q9H1E5 349 aaPredicted RBP18.01■□□□□ 0.47
SAMM50-204ENST00000493161 PNNQ9H307 717 aaKnown RBP18.01■□□□□ 0.47
SAMM50-204ENST00000493161 TAF1P21675 1872 aa18.01■□□□□ 0.47
SAMM50-204ENST00000493161 ANKRD36CQ5JPF3 1778 aa18■□□□□ 0.47
SAMM50-204ENST00000493161 YDJCA8MPS7 323 aa18■□□□□ 0.47
SAMM50-204ENST00000493161 CELF2O95319 508 aaKnown RBP18■□□□□ 0.47
SAMM50-204ENST00000493161 KIAA2012Q0VF49 1180 aa18■□□□□ 0.47
SAMM50-204ENST00000493161 CIAPIN1Q6FI81 312 aa18■□□□□ 0.47
SAMM50-204ENST00000493161 DLK2Q6UY11 383 aa18■□□□□ 0.47
SAMM50-204ENST00000493161 SAPCD2Q86UD0 394 aa18■□□□□ 0.47
SAMM50-204ENST00000493161 TRPM4Q8TD43 1214 aa18■□□□□ 0.47
SAMM50-204ENST00000493161 TCIRG1Q13488 830 aa17.99■□□□□ 0.47
SAMM50-204ENST00000493161 PGAP2Q9UHJ9 254 aa17.99■□□□□ 0.47
SAMM50-204ENST00000493161 TRMT112Q9UI30 125 aaKnown RBP17.99■□□□□ 0.47
SAMM50-204ENST00000493161 DUOX1Q9NRD9 1551 aa17.99■□□□□ 0.47
SAMM50-204ENST00000493161 TMPOP42166 694 aaKnown RBP17.98■□□□□ 0.47
SAMM50-204ENST00000493161 GRAPQ13588 217 aa17.98■□□□□ 0.47
SAMM50-204ENST00000493161 DDX46Q7L014 1031 aaKnown RBP17.98■□□□□ 0.47
SAMM50-204ENST00000493161 GRAPLQ8TC17 118 aaPredicted RBP17.98■□□□□ 0.47
SAMM50-204ENST00000493161 BEGAINQ9BUH8 593 aa17.98■□□□□ 0.47
SAMM50-204ENST00000493161 BCL2L13Q9BXK5 485 aa17.98■□□□□ 0.47
SAMM50-204ENST00000493161 ZNF408Q9H9D4 720 aa17.98■□□□□ 0.47
SAMM50-204ENST00000493161 COL4A1P02462 1669 aa17.97■□□□□ 0.47
SAMM50-204ENST00000493161 FAM161AQ3B820 660 aa17.97■□□□□ 0.47
SAMM50-204ENST00000493161 BABAM1Q9NWV8 329 aa17.97■□□□□ 0.47
SAMM50-204ENST00000493161 SH3TC1Q8TE82 1336 aa17.97■□□□□ 0.47
SAMM50-204ENST00000493161 MAP2K2P36507 400 aa17.96■□□□□ 0.47
SAMM50-204ENST00000493161 NEUROD2Q15784 382 aa17.96■□□□□ 0.47
SAMM50-204ENST00000493161 HSP90AB3PQ58FF7 597 aa17.96■□□□□ 0.47
SAMM50-204ENST00000493161 CCDC146Q8IYE0 955 aa17.96■□□□□ 0.47
SAMM50-204ENST00000493161 CNOT7Q9UIV1 285 aaKnown RBP17.96■□□□□ 0.47
SAMM50-204ENST00000493161 ZBTB12Q9Y330 459 aaPredicted RBP17.96■□□□□ 0.47
SAMM50-204ENST00000493161 CCDC85CA6NKD9 419 aa17.95■□□□□ 0.46
SAMM50-204ENST00000493161 TNIP1Q15025 636 aa17.95■□□□□ 0.46
SAMM50-204ENST00000493161 ZIC5Q96T25 663 aa17.95■□□□□ 0.46
SAMM50-204ENST00000493161 CHPF2Q9P2E5 772 aa17.95■□□□□ 0.46
SAMM50-204ENST00000493161 CDHR2Q9BYE9 1310 aa17.95■□□□□ 0.46
SAMM50-204ENST00000493161 CHL1O00533 1208 aa17.94■□□□□ 0.46
SAMM50-204ENST00000493161 USP48Q86UV5 1035 aa17.94■□□□□ 0.46
SAMM50-204ENST00000493161 MICALL2Q8IY33 904 aa17.94■□□□□ 0.46
SAMM50-204ENST00000493161 ZC3H15Q8WU90 426 aaKnown RBP17.94■□□□□ 0.46
SAMM50-204ENST00000493161 CELF1Q92879 486 aaKnown RBP17.94■□□□□ 0.46
SAMM50-204ENST00000493161 FAM89AQ96GI7 184 aa17.94■□□□□ 0.46
SAMM50-204ENST00000493161 KCNQ5Q9NR82 932 aa17.94■□□□□ 0.46
SAMM50-204ENST00000493161 LAS1LQ9Y4W2 734 aaKnown RBP17.94■□□□□ 0.46
SAMM50-204ENST00000493161 DDX60Q8IY21 1712 aaKnown RBP17.94■□□□□ 0.46
SAMM50-204ENST00000493161 LRRC37AA6NMS7 1700 aa17.93■□□□□ 0.46
SAMM50-204ENST00000493161 PSMD14O00487 310 aa17.93■□□□□ 0.46
SAMM50-204ENST00000493161 EGFRP00533 1210 aa17.93■□□□□ 0.46
SAMM50-204ENST00000493161 CDC37L1Q7L3B6 337 aa17.93■□□□□ 0.46
SAMM50-204ENST00000493161 SAMD7Q7Z3H4 446 aa17.93■□□□□ 0.46
SAMM50-204ENST00000493161 DBNDD1Q9H9R9 158 aa17.93■□□□□ 0.46
SAMM50-204ENST00000493161 ATP5J2-PTCD1G3V325 749 aa17.92■□□□□ 0.46
SAMM50-204ENST00000493161 RIMBP2O15034 1052 aa17.92■□□□□ 0.46
SAMM50-204ENST00000493161 LMOD3Q0VAK6 560 aa17.92■□□□□ 0.46
SAMM50-204ENST00000493161 RTL5Q5HYW3 569 aaPredicted RBP17.92■□□□□ 0.46
SAMM50-204ENST00000493161 HHIPL1Q96JK4 782 aa17.92■□□□□ 0.46
SAMM50-204ENST00000493161 POLLQ9UGP5 575 aa17.92■□□□□ 0.46
SAMM50-204ENST00000493161 NSFL1CQ9UNZ2 370 aaKnown RBP17.92■□□□□ 0.46
SAMM50-204ENST00000493161 TRIM35Q9UPQ4 493 aa17.92■□□□□ 0.46
SAMM50-204ENST00000493161 H7C1D1 291 aa17.91■□□□□ 0.46
SAMM50-204ENST00000493161 GPSM2P81274 684 aa17.91■□□□□ 0.46
SAMM50-204ENST00000493161 WASHC4Q2M389 1173 aa17.91■□□□□ 0.46
SAMM50-204ENST00000493161 PLBD2Q8NHP8 589 aa17.91■□□□□ 0.46
SAMM50-204ENST00000493161 ISCA1Q9BUE6 129 aa17.91■□□□□ 0.46
SAMM50-204ENST00000493161 BRPF1P55201 1214 aaPredicted RBP17.9■□□□□ 0.46
SAMM50-204ENST00000493161 SF3B3Q15393 1217 aaKnown RBP17.9■□□□□ 0.46
SAMM50-204ENST00000493161 DOK7Q18PE1 504 aa17.9■□□□□ 0.46
SAMM50-204ENST00000493161 TBC1D10BQ4KMP7 808 aaPredicted RBP17.9■□□□□ 0.46
SAMM50-204ENST00000493161 HDGFL1Q5TGJ6 251 aa17.9■□□□□ 0.46
SAMM50-204ENST00000493161 ANKRD13DQ6ZTN6 518 aa17.9■□□□□ 0.46
SAMM50-204ENST00000493161 MCOLN1Q9GZU1 580 aa17.9■□□□□ 0.46
SAMM50-204ENST00000493161 RTL9Q8NET4 1388 aa17.9■□□□□ 0.46
SAMM50-204ENST00000493161 RALBP1Q15311 655 aa17.89■□□□□ 0.45
SAMM50-204ENST00000493161 RBM26Q5T8P6 1007 aaKnown RBP17.89■□□□□ 0.45
SAMM50-204ENST00000493161 TMC4Q7Z404 712 aa17.89■□□□□ 0.45
SAMM50-204ENST00000493161 DPF2Q92785 391 aa17.89■□□□□ 0.45
SAMM50-204ENST00000493161 ADM5C9JUS6 153 aa17.88■□□□□ 0.45
SAMM50-204ENST00000493161 C6orf229H3BNL8 230 aa17.88■□□□□ 0.45
SAMM50-204ENST00000493161 HUNKP57058 714 aa17.88■□□□□ 0.45
SAMM50-204ENST00000493161 CASP8AP2Q9UKL3 1982 aa17.88■□□□□ 0.45
SAMM50-204ENST00000493161 CA12O43570 354 aa17.87■□□□□ 0.45
SAMM50-204ENST00000493161 ECE2O60344 883 aa17.87■□□□□ 0.45
SAMM50-204ENST00000493161 RGS19P49795 217 aa17.87■□□□□ 0.45
SAMM50-204ENST00000493161 MLLT1Q03111 559 aaPredicted RBP17.87■□□□□ 0.45
SAMM50-204ENST00000493161 KRT26Q7Z3Y9 468 aa17.87■□□□□ 0.45
SAMM50-204ENST00000493161 FAM155AB1AL88 458 aaPredicted RBP17.86■□□□□ 0.45
SAMM50-204ENST00000493161 TBC1D16Q8TBP0 767 aa17.86■□□□□ 0.45
SAMM50-204ENST00000493161 DBF4Q9UBU7 674 aaPredicted RBP17.86■□□□□ 0.45
SAMM50-204ENST00000493161 ASTN2O75129 1339 aaPredicted RBP17.86■□□□□ 0.45
SAMM50-204ENST00000493161 IRS4O14654 1257 aaPredicted RBP17.85■□□□□ 0.45
SAMM50-204ENST00000493161 NOGQ13253 232 aa17.85■□□□□ 0.45
SAMM50-204ENST00000493161 DGKZQ13574 1117 aa17.85■□□□□ 0.45
SAMM50-204ENST00000493161 DUSP27Q5VZP5 1158 aa17.85■□□□□ 0.45
SAMM50-204ENST00000493161 RUNDC1Q96C34 613 aa17.85■□□□□ 0.45
SAMM50-204ENST00000493161 CFAP44Q96MT7 982 aa17.85■□□□□ 0.45
SAMM50-204ENST00000493161 SEC31BQ9NQW1 1179 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms