RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 MTFR1LQ9H019 292 aa11.76□□□□□ -0.53
CSTF1-206ENST00000493039 GNAI2P04899 355 aa11.75□□□□□ -0.53
CSTF1-206ENST00000493039 PLA2G12BQ9BX93 195 aa11.75□□□□□ -0.53
CSTF1-206ENST00000493039 BICC1Q9H694 974 aaKnown RBP11.75□□□□□ -0.53
CSTF1-206ENST00000493039 PTGER2P43116 358 aa11.75□□□□□ -0.53
CSTF1-206ENST00000493039 RABL6Q3YEC7 729 aaPredicted RBP11.75□□□□□ -0.53
CSTF1-206ENST00000493039 AFDNP55196 1824 aaKnown RBP11.75□□□□□ -0.53
CSTF1-206ENST00000493039 CSF1RP07333 972 aa11.74□□□□□ -0.53
CSTF1-206ENST00000493039 CEP85Q6P2H3 762 aa11.74□□□□□ -0.53
CSTF1-206ENST00000493039 CNBD1Q8NA66 436 aa11.74□□□□□ -0.53
CSTF1-206ENST00000493039 NYXQ9GZU5 481 aa11.74□□□□□ -0.53
CSTF1-206ENST00000493039 PNMA6EA0A0J9YXQ4 647 aa11.74□□□□□ -0.53
CSTF1-206ENST00000493039 TTLL11Q8NHH1 800 aa11.74□□□□□ -0.53
CSTF1-206ENST00000493039 PARP3Q9Y6F1 533 aa11.74□□□□□ -0.53
CSTF1-206ENST00000493039 MTX1Q13505 466 aa11.73□□□□□ -0.53
CSTF1-206ENST00000493039 LMBR1LQ6UX01 489 aa11.73□□□□□ -0.53
CSTF1-206ENST00000493039 PAXIP1Q6ZW49 1069 aaPredicted RBP11.73□□□□□ -0.53
CSTF1-206ENST00000493039 KLRG2A4D1S0 409 aaPredicted RBP11.72□□□□□ -0.53
CSTF1-206ENST00000493039 PDE8AO60658 829 aa11.72□□□□□ -0.53
CSTF1-206ENST00000493039 RBM10P98175 930 aaKnown RBP11.72□□□□□ -0.53
CSTF1-206ENST00000493039 CHMP4BQ9H444 224 aaKnown RBP11.72□□□□□ -0.53
CSTF1-206ENST00000493039 NRXN2Q9P2S2 1712 aa11.72□□□□□ -0.53
CSTF1-206ENST00000493039 GTF2E1P29083 439 aaPredicted RBP11.72□□□□□ -0.53
CSTF1-206ENST00000493039 ATP8B2P98198 1209 aa11.72□□□□□ -0.53
CSTF1-206ENST00000493039 CCDC85AQ96PX6 553 aaPredicted RBP11.72□□□□□ -0.53
CSTF1-206ENST00000493039 UTRNP46939 3433 aa11.72□□□□□ -0.53
CSTF1-206ENST00000493039 IGHDP01880 384 aa11.71□□□□□ -0.53
CSTF1-206ENST00000493039 RFX5P48382 616 aaPredicted RBP11.71□□□□□ -0.53
CSTF1-206ENST00000493039 CTSWP56202 376 aa11.71□□□□□ -0.53
CSTF1-206ENST00000493039 SF3B3Q15393 1217 aaKnown RBP11.71□□□□□ -0.53
CSTF1-206ENST00000493039 GREM2Q9H772 168 aa11.71□□□□□ -0.53
CSTF1-206ENST00000493039 POLA2Q14181 598 aa11.71□□□□□ -0.54
CSTF1-206ENST00000493039 CRY2Q49AN0 593 aa11.71□□□□□ -0.54
CSTF1-206ENST00000493039 RPAP2Q8IXW5 612 aaPredicted RBP11.71□□□□□ -0.54
CSTF1-206ENST00000493039 SSH3Q8TE77 659 aa11.71□□□□□ -0.54
CSTF1-206ENST00000493039 BRIP1Q9BX63 1249 aa11.71□□□□□ -0.54
CSTF1-206ENST00000493039 BCCIPQ9P287 314 aaKnown RBP eCLIP11.71□□□□□ -0.54
CSTF1-206ENST00000493039 DDX60Q8IY21 1712 aaKnown RBP11.7□□□□□ -0.54
CSTF1-206ENST00000493039 FAM161AQ3B820 660 aa11.7□□□□□ -0.54
CSTF1-206ENST00000493039 SEC31BQ9NQW1 1179 aa11.7□□□□□ -0.54
CSTF1-206ENST00000493039 SRGAP3O43295 1099 aa11.7□□□□□ -0.54
CSTF1-206ENST00000493039 KLHDC4Q8TBB5 520 aa11.7□□□□□ -0.54
CSTF1-206ENST00000493039 NLRP3Q96P20 1036 aa11.7□□□□□ -0.54
CSTF1-206ENST00000493039 RIC1Q4ADV7 1423 aa11.7□□□□□ -0.54
CSTF1-206ENST00000493039 COL4A1P02462 1669 aa11.69□□□□□ -0.54
CSTF1-206ENST00000493039 TNRC6CQ9HCJ0 1690 aaKnown RBP11.69□□□□□ -0.54
CSTF1-206ENST00000493039 ST5P78524 1137 aa11.69□□□□□ -0.54
CSTF1-206ENST00000493039 HDAC5Q9UQL6 1122 aa11.69□□□□□ -0.54
CSTF1-206ENST00000493039 NPHP1O15259 732 aa11.68□□□□□ -0.54
CSTF1-206ENST00000493039 PTPN12Q05209 780 aaKnown RBP11.68□□□□□ -0.54
CSTF1-206ENST00000493039 HDAC1Q13547 482 aaPredicted RBP11.68□□□□□ -0.54
CSTF1-206ENST00000493039 PA2G4Q9UQ80 394 aaKnown RBP11.68□□□□□ -0.54
CSTF1-206ENST00000493039 C10orf71Q711Q0 1435 aa11.68□□□□□ -0.54
CSTF1-206ENST00000493039 SRGNP10124 158 aa11.68□□□□□ -0.54
CSTF1-206ENST00000493039 ITGA6P23229 1130 aa11.68□□□□□ -0.54
CSTF1-206ENST00000493039 B4GALNT3Q6L9W6 998 aa11.68□□□□□ -0.54
CSTF1-206ENST00000493039 SLC51AQ86UW1 340 aa11.68□□□□□ -0.54
CSTF1-206ENST00000493039 ZNF594Q96JF6 807 aaPredicted RBP11.68□□□□□ -0.54
CSTF1-206ENST00000493039 SPON1Q9HCB6 807 aa11.68□□□□□ -0.54
CSTF1-206ENST00000493039 ANKRD31Q8N7Z5 1873 aa11.67□□□□□ -0.54
CSTF1-206ENST00000493039 RTL9Q8NET4 1388 aa11.67□□□□□ -0.54
CSTF1-206ENST00000493039 POLD1P28340 1107 aa11.67□□□□□ -0.54
CSTF1-206ENST00000493039 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
CSTF1-206ENST00000493039 IGSF3O75054 1194 aa11.67□□□□□ -0.54
CSTF1-206ENST00000493039 KCNA3P22001 575 aa11.67□□□□□ -0.54
CSTF1-206ENST00000493039 CHRNA5P30532 468 aa11.67□□□□□ -0.54
CSTF1-206ENST00000493039 HOXA10P31260 410 aaPredicted RBP11.67□□□□□ -0.54
CSTF1-206ENST00000493039 CCDC152Q4G0S7 254 aa11.67□□□□□ -0.54
CSTF1-206ENST00000493039 CELF1Q92879 486 aaKnown RBP11.67□□□□□ -0.54
CSTF1-206ENST00000493039 CHMP3Q9Y3E7 222 aa11.67□□□□□ -0.54
CSTF1-206ENST00000493039 PUS3Q9BZE2 481 aaKnown RBP11.66□□□□□ -0.54
CSTF1-206ENST00000493039 DCTPP1Q9H773 170 aa11.66□□□□□ -0.54
CSTF1-206ENST00000493039 COPRSQ9NQ92 184 aa11.66□□□□□ -0.54
CSTF1-206ENST00000493039 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.66□□□□□ -0.54
CSTF1-206ENST00000493039 LAMB2P55268 1798 aa11.66□□□□□ -0.54
CSTF1-206ENST00000493039 KDM2BQ8NHM5 1336 aa11.66□□□□□ -0.54
CSTF1-206ENST00000493039 PDE6BP35913 854 aa11.66□□□□□ -0.54
CSTF1-206ENST00000493039 IFIT5Q13325 482 aaKnown RBP11.66□□□□□ -0.54
CSTF1-206ENST00000493039 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.66□□□□□ -0.54
CSTF1-206ENST00000493039 NAP1L5Q96NT1 182 aaPredicted RBP11.66□□□□□ -0.54
CSTF1-206ENST00000493039 NOP58Q9Y2X3 529 aaKnown RBP11.66□□□□□ -0.54
CSTF1-206ENST00000493039 CCDC57Q2TAC2 916 aa11.65□□□□□ -0.54
CSTF1-206ENST00000493039 LRRC24Q50LG9 513 aa11.65□□□□□ -0.54
CSTF1-206ENST00000493039 ATG9AQ7Z3C6 839 aa11.65□□□□□ -0.54
CSTF1-206ENST00000493039 A0A0G2JLW4 131 aa11.64□□□□□ -0.55
CSTF1-206ENST00000493039 C2CD5Q86YS7 1000 aa11.64□□□□□ -0.55
CSTF1-206ENST00000493039 EXOC6BQ9Y2D4 811 aa11.64□□□□□ -0.55
CSTF1-206ENST00000493039 ANKRD18BA2A2Z9 1011 aa11.64□□□□□ -0.55
CSTF1-206ENST00000493039 DPEP1P16444 411 aa11.64□□□□□ -0.55
CSTF1-206ENST00000493039 RPS8P62241 208 aaKnown RBP11.64□□□□□ -0.55
CSTF1-206ENST00000493039 SMC5Q8IY18 1101 aa11.64□□□□□ -0.55
CSTF1-206ENST00000493039 SIL1Q9H173 461 aa11.64□□□□□ -0.55
CSTF1-206ENST00000493039 RWDD1Q9H446 243 aaPredicted RBP11.64□□□□□ -0.55
CSTF1-206ENST00000493039 RIPOR2Q9Y4F9 1068 aa11.64□□□□□ -0.55
CSTF1-206ENST00000493039 TAF1P21675 1872 aa11.64□□□□□ -0.55
CSTF1-206ENST00000493039 MYH3P11055 1940 aa11.63□□□□□ -0.55
CSTF1-206ENST00000493039 HMMRO75330 724 aa11.63□□□□□ -0.55
CSTF1-206ENST00000493039 SURF6O75683 361 aaKnown RBP11.63□□□□□ -0.55
CSTF1-206ENST00000493039 SASH1O94885 1247 aa11.63□□□□□ -0.55
CSTF1-206ENST00000493039 NPR1P16066 1061 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms