RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 JRKLQ9Y4A0 524 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 ARHGEF10O15013 1369 aa7.53□□□□□ -1.2
CCDC6-202ENST00000491922 TTC41PQ6P2S7 1318 aa7.52□□□□□ -1.2
CCDC6-202ENST00000491922 GYS2P54840 703 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 ETF1P62495 437 aaKnown RBP7.52□□□□□ -1.21
CCDC6-202ENST00000491922 ST3GAL1Q11201 340 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 LRRFIP1Q32MZ4 808 aaKnown RBP7.52□□□□□ -1.21
CCDC6-202ENST00000491922 CC2D1AQ6P1N0 951 aaPredicted RBP7.52□□□□□ -1.21
CCDC6-202ENST00000491922 C11orf57Q6ZUT1 292 aaPredicted RBP7.52□□□□□ -1.21
CCDC6-202ENST00000491922 REXO1L1PQ8IX06 675 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 CNTROBQ8N137 903 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 DNAI1Q9UI46 699 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 HDAC5Q9UQL6 1122 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 N4BP2Q86UW6 1770 aaPredicted RBP7.52□□□□□ -1.21
CCDC6-202ENST00000491922 PTPRMP28827 1452 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 PIK3C2BO00750 1634 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 LOC102724159A0A0B4J2E5 919 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 FAM83GA6ND36 823 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 CHL1O00533 1208 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 PWP2Q15269 919 aaKnown RBP7.52□□□□□ -1.21
CCDC6-202ENST00000491922 ME3Q16798 604 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 FERMT3Q86UX7 667 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 GPR161Q8N6U8 529 aaKnown RBP7.52□□□□□ -1.21
CCDC6-202ENST00000491922 KCNB2Q92953 911 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 SIRT1Q96EB6 747 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 JAKMIP1Q96N16 626 aaKnown RBP7.52□□□□□ -1.21
CCDC6-202ENST00000491922 NAT10Q9H0A0 1025 aaKnown RBP7.52□□□□□ -1.21
CCDC6-202ENST00000491922 RNF39Q9H2S5 420 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 ANO10Q9NW15 660 aa7.52□□□□□ -1.21
CCDC6-202ENST00000491922 RPS6KA5O75582 802 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 SASH3O75995 380 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 SEC31AO94979 1220 aaKnown RBP7.51□□□□□ -1.21
CCDC6-202ENST00000491922 SLC4A2P04920 1241 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 SFPQP23246 707 aaKnown RBP eCLIP7.51□□□□□ -1.21
CCDC6-202ENST00000491922 LMAN1P49257 510 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 CACNB1Q02641 598 aaPredicted RBP7.51□□□□□ -1.21
CCDC6-202ENST00000491922 HOMER1Q86YM7 354 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 DHX40Q8IX18 779 aaKnown RBP7.51□□□□□ -1.21
CCDC6-202ENST00000491922 RUFY2Q8WXA3 655 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 PGBD1Q96JS3 809 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 DEF6Q9H4E7 631 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 ARFGAP3Q9NP61 516 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 ZCCHC17Q9NP64 241 aaKnown RBP7.51□□□□□ -1.21
CCDC6-202ENST00000491922 ADAM21Q9UKJ8 722 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 RAB11FIP3O75154 756 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 CPA1P15085 419 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 ATP2B1P20020 1258 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 EVCP57679 992 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 GORABQ5T7V8 394 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 JAKMIP3Q5VZ66 844 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 FAM173BQ6P4H8 233 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 SLC4A10Q6U841 1118 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 CEP57L1Q8IYX8 460 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 PPM1EQ8WY54 764 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 TFIP11Q9UBB9 837 aaKnown RBP7.51□□□□□ -1.21
CCDC6-202ENST00000491922 MYH15Q9Y2K3 1946 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 ADAMTSL3P82987 1691 aa7.51□□□□□ -1.21
CCDC6-202ENST00000491922 SMC2O95347 1197 aa7.5□□□□□ -1.21
CCDC6-202ENST00000491922 SAFB2Q14151 953 aaKnown RBP eCLIP7.5□□□□□ -1.21
CCDC6-202ENST00000491922 DCTN1Q14203 1278 aa7.5□□□□□ -1.21
CCDC6-202ENST00000491922 ANKRD1Q15327 319 aa7.5□□□□□ -1.21
CCDC6-202ENST00000491922 NBPF11Q86T75 865 aa7.5□□□□□ -1.21
CCDC6-202ENST00000491922 PI4K2BQ8TCG2 481 aa7.5□□□□□ -1.21
CCDC6-202ENST00000491922 STAG3Q9UJ98 1225 aa7.5□□□□□ -1.21
CCDC6-202ENST00000491922 CFAP45Q9UL16 551 aa7.5□□□□□ -1.21
CCDC6-202ENST00000491922 XRN1Q8IZH2 1706 aaKnown RBP7.5□□□□□ -1.21
CCDC6-202ENST00000491922 PNMA6EA0A0J9YXQ4 647 aa7.5□□□□□ -1.21
CCDC6-202ENST00000491922 ZKSCAN1P17029 563 aaPredicted RBP7.5□□□□□ -1.21
CCDC6-202ENST00000491922 SUGP1Q8IWZ8 645 aaKnown RBP7.5□□□□□ -1.21
CCDC6-202ENST00000491922 NECAB1Q8N987 351 aa7.5□□□□□ -1.21
CCDC6-202ENST00000491922 ZNF622Q969S3 477 aaKnown RBP eCLIP7.5□□□□□ -1.21
CCDC6-202ENST00000491922 CHMP4CQ96CF2 233 aa7.5□□□□□ -1.21
CCDC6-202ENST00000491922 MKRN1Q9UHC7 482 aaKnown RBP7.5□□□□□ -1.21
CCDC6-202ENST00000491922 ATP7BP35670 1465 aa7.5□□□□□ -1.21
CCDC6-202ENST00000491922 SOS1Q07889 1333 aaPredicted RBP7.5□□□□□ -1.21
CCDC6-202ENST00000491922 URI1O94763 535 aaPredicted RBP7.49□□□□□ -1.21
CCDC6-202ENST00000491922 APPP05067 770 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 PSME1Q06323 249 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 C1QBPQ07021 282 aaKnown RBP7.49□□□□□ -1.21
CCDC6-202ENST00000491922 ARMCX5Q6P1M9 558 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 PACS2Q86VP3 889 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 CCDC34Q96HJ3 373 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 CARD6Q9BX69 1037 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 FUT8Q9BYC5 575 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 TPCN1Q9ULQ1 816 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 NPATQ14207 1427 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 ADCY9O60503 1353 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 PSMA5P28066 241 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 ADCK5Q3MIX3 580 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 SWT1Q5T5J6 900 aaKnown RBP7.49□□□□□ -1.21
CCDC6-202ENST00000491922 PRPF40BQ6NWY9 871 aaKnown RBP7.49□□□□□ -1.21
CCDC6-202ENST00000491922 CWC27Q6UX04 472 aaKnown RBP7.49□□□□□ -1.21
CCDC6-202ENST00000491922 TMC6Q7Z403 805 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 CCDC91Q7Z6B0 441 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 MSL3Q8N5Y2 521 aaKnown RBP7.49□□□□□ -1.21
CCDC6-202ENST00000491922 AOPEPQ8N6M6 819 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 RABGGTAQ92696 567 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 MPHOSPH8Q99549 860 aa7.49□□□□□ -1.21
CCDC6-202ENST00000491922 ALDH8A1Q9H2A2 487 aaPredicted RBP7.49□□□□□ -1.21
CCDC6-202ENST00000491922 ZSCAN16Q9H4T2 348 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms