RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 MCCP23508 829 aa21.68■■□□□ 1.06
EXD3-212ENST00000491734 FOXO4P98177 505 aa21.68■■□□□ 1.06
EXD3-212ENST00000491734 LMBR1LQ6UX01 489 aa21.68■■□□□ 1.06
EXD3-212ENST00000491734 CWC27Q6UX04 472 aaKnown RBP21.68■■□□□ 1.06
EXD3-212ENST00000491734 INTS4Q96HW7 963 aaKnown RBP21.68■■□□□ 1.06
EXD3-212ENST00000491734 COL15A1P39059 1388 aa21.68■■□□□ 1.06
EXD3-212ENST00000491734 BARGINQ6ZT62 677 aa21.68■■□□□ 1.06
EXD3-212ENST00000491734 KAT6BQ8WYB5 2073 aa21.68■■□□□ 1.06
EXD3-212ENST00000491734 SYCE3A1L190 88 aa21.67■■□□□ 1.06
EXD3-212ENST00000491734 NEK4P51957 841 aa21.67■■□□□ 1.06
EXD3-212ENST00000491734 ANAPC15P60006 121 aa21.67■■□□□ 1.06
EXD3-212ENST00000491734 TFCP2Q12800 502 aa21.67■■□□□ 1.06
EXD3-212ENST00000491734 DDB1Q16531 1140 aa21.67■■□□□ 1.06
EXD3-212ENST00000491734 TMX3Q96JJ7 454 aa21.67■■□□□ 1.06
EXD3-212ENST00000491734 TEX13AQ9BXU3 409 aaPredicted RBP21.67■■□□□ 1.06
EXD3-212ENST00000491734 UQCRHLA0A096LP55 91 aa21.66■■□□□ 1.06
EXD3-212ENST00000491734 UQCRHP07919 91 aa21.66■■□□□ 1.06
EXD3-212ENST00000491734 CHMP3Q9Y3E7 222 aa21.66■■□□□ 1.06
EXD3-212ENST00000491734 SASS6Q6UVJ0 657 aa21.65■■□□□ 1.06
EXD3-212ENST00000491734 LSG1Q9H089 658 aaKnown RBP21.65■■□□□ 1.06
EXD3-212ENST00000491734 BOLA2Q9H3K6 86 aa21.65■■□□□ 1.06
EXD3-212ENST00000491734 SLC4A9Q96Q91 983 aa21.65■■□□□ 1.06
EXD3-212ENST00000491734 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.65■■□□□ 1.06
EXD3-212ENST00000491734 HSPA4P34932 840 aa21.64■■□□□ 1.06
EXD3-212ENST00000491734 SYAP1Q96A49 352 aaPredicted RBP21.64■■□□□ 1.06
EXD3-212ENST00000491734 SYTL4Q96C24 671 aaPredicted RBP21.64■■□□□ 1.06
EXD3-212ENST00000491734 DIAPH3Q9NSV4 1193 aa21.64■■□□□ 1.06
EXD3-212ENST00000491734 NSFL1CQ9UNZ2 370 aaKnown RBP21.64■■□□□ 1.06
EXD3-212ENST00000491734 BCL9LQ86UU0 1499 aa21.64■■□□□ 1.05
EXD3-212ENST00000491734 CCDC191Q8NCU4 936 aa21.64■■□□□ 1.05
EXD3-212ENST00000491734 EVI5LQ96CN4 794 aa21.64■■□□□ 1.05
EXD3-212ENST00000491734 RAD50Q92878 1312 aa21.63■■□□□ 1.05
EXD3-212ENST00000491734 TNNI3KQ59H18 835 aa21.63■■□□□ 1.05
EXD3-212ENST00000491734 FPGT-TNNI3KV9GXZ4 949 aa21.63■■□□□ 1.05
EXD3-212ENST00000491734 EPB41L2O43491 1005 aaKnown RBP21.62■■□□□ 1.05
EXD3-212ENST00000491734 ISCA1Q9BUE6 129 aa21.62■■□□□ 1.05
EXD3-212ENST00000491734 TSPY26PQ9H489 355 aa21.62■■□□□ 1.05
EXD3-212ENST00000491734 DBNLQ9UJU6 430 aaKnown RBP21.62■■□□□ 1.05
EXD3-212ENST00000491734 TJP1Q07157 1748 aa21.62■■□□□ 1.05
EXD3-212ENST00000491734 PHF14O94880 888 aa21.61■■□□□ 1.05
EXD3-212ENST00000491734 STARD3NLO95772 234 aa21.61■■□□□ 1.05
EXD3-212ENST00000491734 RBM10P98175 930 aaKnown RBP21.61■■□□□ 1.05
EXD3-212ENST00000491734 TCIRG1Q13488 830 aa21.61■■□□□ 1.05
EXD3-212ENST00000491734 KLHL34Q8N239 644 aa21.61■■□□□ 1.05
EXD3-212ENST00000491734 UPF3BQ9BZI7 483 aaKnown RBP21.61■■□□□ 1.05
EXD3-212ENST00000491734 HSPA1LP34931 641 aa21.61■■□□□ 1.05
EXD3-212ENST00000491734 MARCH10Q8NA82 808 aaPredicted RBP21.61■■□□□ 1.05
EXD3-212ENST00000491734 UVSSAQ2YD98 709 aa21.6■■□□□ 1.05
EXD3-212ENST00000491734 FAM184AQ8NB25 1140 aa21.6■■□□□ 1.05
EXD3-212ENST00000491734 FAM13BQ9NYF5 915 aa21.6■■□□□ 1.05
EXD3-212ENST00000491734 CCDC9Q9Y3X0 531 aaKnown RBP21.6■■□□□ 1.05
EXD3-212ENST00000491734 PTH1RQ03431 593 aa21.6■■□□□ 1.05
EXD3-212ENST00000491734 NOL8Q76FK4 1167 aaKnown RBP21.6■■□□□ 1.05
EXD3-212ENST00000491734 EDC3Q96F86 508 aaKnown RBP21.6■■□□□ 1.05
EXD3-212ENST00000491734 SPATA31A6Q5VVP1 1343 aa21.59■■□□□ 1.05
EXD3-212ENST00000491734 VPS72Q15906 364 aa21.59■■□□□ 1.05
EXD3-212ENST00000491734 RASEFQ8IZ41 740 aa21.59■■□□□ 1.05
EXD3-212ENST00000491734 FNBP4Q8N3X1 1017 aaPredicted RBP21.59■■□□□ 1.05
EXD3-212ENST00000491734 ZNF594Q96JF6 807 aaPredicted RBP21.59■■□□□ 1.05
EXD3-212ENST00000491734 FAM227BQ96M60 508 aa21.59■■□□□ 1.05
EXD3-212ENST00000491734 C8orf37Q96NL8 207 aa21.59■■□□□ 1.05
EXD3-212ENST00000491734 SNX14Q9Y5W7 946 aa21.59■■□□□ 1.05
EXD3-212ENST00000491734 CYP19A1P11511 503 aaPredicted RBP21.58■■□□□ 1.05
EXD3-212ENST00000491734 KIF6Q6ZMV9 814 aa21.58■■□□□ 1.05
EXD3-212ENST00000491734 ATG9AQ7Z3C6 839 aa21.58■■□□□ 1.05
EXD3-212ENST00000491734 RUFY2Q8WXA3 655 aa21.58■■□□□ 1.05
EXD3-212ENST00000491734 NGLY1Q96IV0 654 aa21.58■■□□□ 1.05
EXD3-212ENST00000491734 DBNDD2Q9BQY9 259 aa21.58■■□□□ 1.05
EXD3-212ENST00000491734 KIAA2012Q0VF49 1180 aa21.58■■□□□ 1.04
EXD3-212ENST00000491734 NMIQ13287 307 aaPredicted RBP21.58■■□□□ 1.04
EXD3-212ENST00000491734 HLFQ16534 295 aa21.57■■□□□ 1.04
EXD3-212ENST00000491734 NDUFB9Q9Y6M9 179 aa21.57■■□□□ 1.04
EXD3-212ENST00000491734 TMEM87AQ8NBN3 555 aa21.57■■□□□ 1.04
EXD3-212ENST00000491734 FSD1Q9BTV5 496 aa21.57■■□□□ 1.04
EXD3-212ENST00000491734 CICQ96RK0 1608 aaPredicted RBP21.56■■□□□ 1.04
EXD3-212ENST00000491734 LRRC24Q50LG9 513 aa21.56■■□□□ 1.04
EXD3-212ENST00000491734 FAM89AQ96GI7 184 aa21.56■■□□□ 1.04
EXD3-212ENST00000491734 CHAMP1Q96JM3 812 aa21.56■■□□□ 1.04
EXD3-212ENST00000491734 ZBTB1Q9Y2K1 713 aa21.56■■□□□ 1.04
EXD3-212ENST00000491734 A0A0G2JS52 829 aa21.55■■□□□ 1.04
EXD3-212ENST00000491734 ATP5JP18859 108 aa21.55■■□□□ 1.04
EXD3-212ENST00000491734 MAP3K15Q6ZN16 1313 aa21.55■■□□□ 1.04
EXD3-212ENST00000491734 ACSBG1Q96GR2 724 aa21.55■■□□□ 1.04
EXD3-212ENST00000491734 A0A0D9SFI3 127 aa21.54■■□□□ 1.04
EXD3-212ENST00000491734 TRIM28Q13263 835 aaKnown RBP21.54■■□□□ 1.04
EXD3-212ENST00000491734 SYNE4Q8N205 404 aa21.54■■□□□ 1.04
EXD3-212ENST00000491734 CCDC85AQ96PX6 553 aaPredicted RBP21.54■■□□□ 1.04
EXD3-212ENST00000491734 PUS3Q9BZE2 481 aaKnown RBP21.54■■□□□ 1.04
EXD3-212ENST00000491734 GPTP24298 496 aa21.54■■□□□ 1.04
EXD3-212ENST00000491734 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.54■■□□□ 1.04
EXD3-212ENST00000491734 WDR33Q9C0J8 1336 aaKnown RBP21.54■■□□□ 1.04
EXD3-212ENST00000491734 FAM98CQ17RN3 349 aaKnown RBP21.53■■□□□ 1.04
EXD3-212ENST00000491734 GIGYF2Q6Y7W6 1299 aaKnown RBP21.53■■□□□ 1.04
EXD3-212ENST00000491734 SMAP1Q8IYB5 467 aaPredicted RBP21.53■■□□□ 1.04
EXD3-212ENST00000491734 RNF214Q8ND24 703 aa21.53■■□□□ 1.04
EXD3-212ENST00000491734 TIMM10P62072 90 aa21.53■■□□□ 1.04
EXD3-212ENST00000491734 PRPF40BQ6NWY9 871 aaKnown RBP21.53■■□□□ 1.04
EXD3-212ENST00000491734 MYRIPQ8NFW9 859 aa21.53■■□□□ 1.04
EXD3-212ENST00000491734 PRIMPOLQ96LW4 560 aa21.53■■□□□ 1.04
EXD3-212ENST00000491734 EYA2O00167 538 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms