RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 QRICH2Q9H0J4 1663 aa6.55□□□□□ -1.36
PTPRK-213ENST00000490332 PRR36Q9H6K5 1346 aa6.55□□□□□ -1.36
PTPRK-213ENST00000490332 CA12O43570 354 aa6.55□□□□□ -1.36
PTPRK-213ENST00000490332 SMPD1P17405 629 aa6.55□□□□□ -1.36
PTPRK-213ENST00000490332 FXR1P51114 621 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTPRK-213ENST00000490332 TRIM47Q96LD4 638 aa6.55□□□□□ -1.36
PTPRK-213ENST00000490332 CCNL1Q9UK58 526 aaPredicted RBP6.55□□□□□ -1.36
PTPRK-213ENST00000490332 PPIP5K1Q6PFW1 1433 aa6.55□□□□□ -1.36
PTPRK-213ENST00000490332 POLR3AO14802 1390 aaPredicted RBP6.55□□□□□ -1.36
PTPRK-213ENST00000490332 CASP8AP2Q9UKL3 1982 aa6.55□□□□□ -1.36
PTPRK-213ENST00000490332 THSD7BQ9C0I4 1608 aa6.54□□□□□ -1.36
PTPRK-213ENST00000490332 EVC2Q86UK5 1308 aa6.54□□□□□ -1.36
PTPRK-213ENST00000490332 RASSF10A6NK89 507 aa6.54□□□□□ -1.36
PTPRK-213ENST00000490332 E9PSI1 815 aa6.54□□□□□ -1.36
PTPRK-213ENST00000490332 MLLT3P42568 568 aaPredicted RBP6.54□□□□□ -1.36
PTPRK-213ENST00000490332 SOX10P56693 466 aa6.54□□□□□ -1.36
PTPRK-213ENST00000490332 SLFN5Q08AF3 891 aa6.54□□□□□ -1.36
PTPRK-213ENST00000490332 DGKZQ13574 1117 aa6.54□□□□□ -1.36
PTPRK-213ENST00000490332 AAMPQ13685 434 aa6.54□□□□□ -1.36
PTPRK-213ENST00000490332 TMEM132EQ6IEE7 984 aa6.54□□□□□ -1.36
PTPRK-213ENST00000490332 MORC1Q86VD1 984 aa6.54□□□□□ -1.36
PTPRK-213ENST00000490332 FAM160A2Q8N612 972 aaPredicted RBP6.54□□□□□ -1.36
PTPRK-213ENST00000490332 ABTB2Q8N961 1025 aa6.54□□□□□ -1.36
PTPRK-213ENST00000490332 THAP11Q96EK4 314 aa6.54□□□□□ -1.36
PTPRK-213ENST00000490332 CFAP53Q96M91 514 aa6.54□□□□□ -1.36
PTPRK-213ENST00000490332 SALL2Q9Y467 1007 aaPredicted RBP6.54□□□□□ -1.36
PTPRK-213ENST00000490332 CGNL1Q0VF96 1302 aa6.53□□□□□ -1.36
PTPRK-213ENST00000490332 ZNF521Q96K83 1311 aa6.53□□□□□ -1.36
PTPRK-213ENST00000490332 PASKQ96RG2 1323 aa6.53□□□□□ -1.36
PTPRK-213ENST00000490332 WDR33Q9C0J8 1336 aaKnown RBP6.53□□□□□ -1.36
PTPRK-213ENST00000490332 C5P01031 1676 aa6.53□□□□□ -1.36
PTPRK-213ENST00000490332 TTC24A2A3L6 582 aaPredicted RBP6.53□□□□□ -1.36
PTPRK-213ENST00000490332 ANP32AP39687 249 aaKnown RBP6.53□□□□□ -1.36
PTPRK-213ENST00000490332 DEFB115Q30KQ5 88 aa6.53□□□□□ -1.36
PTPRK-213ENST00000490332 TRMT2AQ8IZ69 625 aaKnown RBP6.53□□□□□ -1.36
PTPRK-213ENST00000490332 EXOC6Q8TAG9 804 aa6.53□□□□□ -1.36
PTPRK-213ENST00000490332 BBXQ8WY36 941 aaPredicted RBP6.53□□□□□ -1.36
PTPRK-213ENST00000490332 PRAM1Q96QH2 718 aa6.53□□□□□ -1.36
PTPRK-213ENST00000490332 POGKQ9P215 609 aa6.53□□□□□ -1.36
PTPRK-213ENST00000490332 NSD2O96028 1365 aa6.53□□□□□ -1.36
PTPRK-213ENST00000490332 SZT2Q5T011 3432 aa6.52□□□□□ -1.37
PTPRK-213ENST00000490332 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.52□□□□□ -1.37
PTPRK-213ENST00000490332 ZBTB7CA1YPR0 619 aa6.52□□□□□ -1.37
PTPRK-213ENST00000490332 CSB-PGBD3P0DP91 1061 aa6.52□□□□□ -1.37
PTPRK-213ENST00000490332 SAFB2Q14151 953 aaKnown RBP eCLIP6.52□□□□□ -1.37
PTPRK-213ENST00000490332 DUSP27Q5VZP5 1158 aa6.52□□□□□ -1.37
PTPRK-213ENST00000490332 DCAF5Q96JK2 942 aa6.52□□□□□ -1.37
PTPRK-213ENST00000490332 CARD14Q9BXL6 1004 aa6.52□□□□□ -1.37
PTPRK-213ENST00000490332 PNNQ9H307 717 aaKnown RBP6.52□□□□□ -1.37
PTPRK-213ENST00000490332 WDR70Q9NW82 654 aa6.52□□□□□ -1.37
PTPRK-213ENST00000490332 TRAK1Q9UPV9 953 aa6.52□□□□□ -1.37
PTPRK-213ENST00000490332 KDM6AO15550 1401 aaPredicted RBP6.51□□□□□ -1.37
PTPRK-213ENST00000490332 A0A0G2JLW4 131 aa6.51□□□□□ -1.37
PTPRK-213ENST00000490332 ECE1P42892 770 aa6.51□□□□□ -1.37
PTPRK-213ENST00000490332 KCNQ4P56696 695 aa6.51□□□□□ -1.37
PTPRK-213ENST00000490332 MORN1Q5T089 497 aa6.51□□□□□ -1.37
PTPRK-213ENST00000490332 CENPQQ7L2Z9 268 aaPredicted RBP6.51□□□□□ -1.37
PTPRK-213ENST00000490332 WDR63Q8IWG1 891 aa6.51□□□□□ -1.37
PTPRK-213ENST00000490332 RUNDC1Q96C34 613 aa6.51□□□□□ -1.37
PTPRK-213ENST00000490332 PRDM9Q9NQV7 894 aa6.51□□□□□ -1.37
PTPRK-213ENST00000490332 PIM2Q9P1W9 311 aa6.51□□□□□ -1.37
PTPRK-213ENST00000490332 MINK1Q8N4C8 1332 aaPredicted RBP6.5□□□□□ -1.37
PTPRK-213ENST00000490332 J3QL48 77 aa6.5□□□□□ -1.37
PTPRK-213ENST00000490332 WASLO00401 505 aaPredicted RBP6.5□□□□□ -1.37
PTPRK-213ENST00000490332 WNT7AO00755 349 aa6.5□□□□□ -1.37
PTPRK-213ENST00000490332 LMNB1P20700 586 aa6.5□□□□□ -1.37
PTPRK-213ENST00000490332 PDE3AQ14432 1141 aa6.5□□□□□ -1.37
PTPRK-213ENST00000490332 CCDC27Q2M243 656 aa6.5□□□□□ -1.37
PTPRK-213ENST00000490332 DALRD3Q5D0E6 543 aaKnown RBP6.5□□□□□ -1.37
PTPRK-213ENST00000490332 SNIP1Q8TAD8 396 aaKnown RBP6.5□□□□□ -1.37
PTPRK-213ENST00000490332 SENP2Q9HC62 589 aa6.5□□□□□ -1.37
PTPRK-213ENST00000490332 TERF2IPQ9NYB0 399 aa6.5□□□□□ -1.37
PTPRK-213ENST00000490332 TAF1LQ8IZX4 1826 aa6.5□□□□□ -1.37
PTPRK-213ENST00000490332 LTBP1Q14766 1721 aa6.5□□□□□ -1.37
PTPRK-213ENST00000490332 TIAM2Q8IVF5 1701 aa6.5□□□□□ -1.37
PTPRK-213ENST00000490332 ADGRB1O14514 1584 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 ANKRD36BQ8N2N9 1353 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 TRIOBPQ9H2D6 2365 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 APAF1O14727 1248 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 IL2RBP14784 551 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 DPEP1P16444 411 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 LDHDQ86WU2 507 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 MPNDQ8N594 471 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 PXYLP1Q8TE99 480 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 AK7Q96M32 723 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 IPO9Q96P70 1041 aaKnown RBP6.49□□□□□ -1.37
PTPRK-213ENST00000490332 SLC12A5Q9H2X9 1139 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 CCDC87Q9NVE4 849 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 SLIT3O75094 1523 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 UBR3Q6ZT12 1888 aa6.49□□□□□ -1.37
PTPRK-213ENST00000490332 CPSF1Q10570 1443 aaKnown RBP6.49□□□□□ -1.37
PTPRK-213ENST00000490332 COL6A3P12111 3177 aa6.48□□□□□ -1.37
PTPRK-213ENST00000490332 CT47B1P0C2W7 299 aaPredicted RBP6.48□□□□□ -1.37
PTPRK-213ENST00000490332 SSFA2P28290 1259 aa6.48□□□□□ -1.37
PTPRK-213ENST00000490332 GMPRP36959 345 aa6.48□□□□□ -1.37
PTPRK-213ENST00000490332 HPS1Q92902 700 aa6.48□□□□□ -1.37
PTPRK-213ENST00000490332 SYTL4Q96C24 671 aaPredicted RBP6.48□□□□□ -1.37
PTPRK-213ENST00000490332 CRBNQ96SW2 442 aa6.48□□□□□ -1.37
PTPRK-213ENST00000490332 MYH16Q9H6N6 1097 aa6.48□□□□□ -1.37
PTPRK-213ENST00000490332 NOP58Q9Y2X3 529 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms