RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 PPIP5K2O43314 1243 aa15.38■□□□□ 0.05
ACTN4-206ENST00000489451 EIF6P56537 245 aaKnown RBP15.38■□□□□ 0.05
ACTN4-206ENST00000489451 GRIPAP1Q4V328 841 aa15.38■□□□□ 0.05
ACTN4-206ENST00000489451 PNMA8AQ86V59 439 aaPredicted RBP15.38■□□□□ 0.05
ACTN4-206ENST00000489451 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
ACTN4-206ENST00000489451 LAS1LQ9Y4W2 734 aaKnown RBP15.38■□□□□ 0.05
ACTN4-206ENST00000489451 ZNF853P0CG23 659 aa15.37■□□□□ 0.05
ACTN4-206ENST00000489451 HSP90AB3PQ58FF7 597 aa15.37■□□□□ 0.05
ACTN4-206ENST00000489451 HDGFL1Q5TGJ6 251 aa15.37■□□□□ 0.05
ACTN4-206ENST00000489451 ISCA1Q9BUE6 129 aa15.37■□□□□ 0.05
ACTN4-206ENST00000489451 TRPM7Q96QT4 1865 aa15.37■□□□□ 0.05
ACTN4-206ENST00000489451 CXCL9Q07325 125 aa15.36■□□□□ 0.05
ACTN4-206ENST00000489451 SP8Q8IXZ3 490 aa15.36■□□□□ 0.05
ACTN4-206ENST00000489451 NIM1KQ8IY84 436 aa15.36■□□□□ 0.05
ACTN4-206ENST00000489451 PRKRIP1Q9H875 184 aaPredicted RBP15.36■□□□□ 0.05
ACTN4-206ENST00000489451 MBIPQ9NS73 344 aa15.36■□□□□ 0.05
ACTN4-206ENST00000489451 TRMT112Q9UI30 125 aaKnown RBP15.36■□□□□ 0.05
ACTN4-206ENST00000489451 SH3TC1Q8TE82 1336 aa15.36■□□□□ 0.05
ACTN4-206ENST00000489451 HOXB7P09629 217 aa15.35■□□□□ 0.05
ACTN4-206ENST00000489451 GRAPQ13588 217 aa15.35■□□□□ 0.05
ACTN4-206ENST00000489451 WDR43Q15061 677 aaKnown RBP eCLIP15.35■□□□□ 0.05
ACTN4-206ENST00000489451 DUSP27Q5VZP5 1158 aa15.35■□□□□ 0.05
ACTN4-206ENST00000489451 PLBD2Q8NHP8 589 aa15.35■□□□□ 0.05
ACTN4-206ENST00000489451 GRAPLQ8TC17 118 aaPredicted RBP15.35■□□□□ 0.05
ACTN4-206ENST00000489451 ABT1Q9ULW3 272 aaKnown RBP15.35■□□□□ 0.05
ACTN4-206ENST00000489451 YDJCA8MPS7 323 aa15.34■□□□□ 0.05
ACTN4-206ENST00000489451 ATP5J2-PTCD1G3V325 749 aa15.34■□□□□ 0.05
ACTN4-206ENST00000489451 TRAF5O00463 557 aa15.34■□□□□ 0.05
ACTN4-206ENST00000489451 BBOX1O75936 387 aa15.34■□□□□ 0.05
ACTN4-206ENST00000489451 KIAA2012Q0VF49 1180 aa15.34■□□□□ 0.05
ACTN4-206ENST00000489451 PAXIP1Q6ZW49 1069 aaPredicted RBP15.34■□□□□ 0.05
ACTN4-206ENST00000489451 VPS33BQ9H267 617 aa15.34■□□□□ 0.05
ACTN4-206ENST00000489451 GPRC5DQ9NZD1 345 aa15.34■□□□□ 0.05
ACTN4-206ENST00000489451 TSKSQ9UJT2 592 aa15.34■□□□□ 0.05
ACTN4-206ENST00000489451 ZNRF3Q9ULT6 936 aa15.34■□□□□ 0.05
ACTN4-206ENST00000489451 CASP8AP2Q9UKL3 1982 aa15.34■□□□□ 0.05
ACTN4-206ENST00000489451 SHTN1A0MZ66 631 aa15.33■□□□□ 0.04
ACTN4-206ENST00000489451 LMOD1P29536 600 aaPredicted RBP15.33■□□□□ 0.04
ACTN4-206ENST00000489451 CST9Q5W186 159 aa15.33■□□□□ 0.04
ACTN4-206ENST00000489451 DPP8Q6V1X1 898 aaPredicted RBP15.33■□□□□ 0.04
ACTN4-206ENST00000489451 ANKRD13DQ6ZTN6 518 aa15.33■□□□□ 0.04
ACTN4-206ENST00000489451 MPNDQ8N594 471 aa15.33■□□□□ 0.04
ACTN4-206ENST00000489451 CELF1Q92879 486 aaKnown RBP15.33■□□□□ 0.04
ACTN4-206ENST00000489451 FAM89AQ96GI7 184 aa15.33■□□□□ 0.04
ACTN4-206ENST00000489451 DBF4Q9UBU7 674 aaPredicted RBP15.33■□□□□ 0.04
ACTN4-206ENST00000489451 GMPSP49915 693 aaPredicted RBP15.32■□□□□ 0.04
ACTN4-206ENST00000489451 DGKZQ13574 1117 aa15.32■□□□□ 0.04
ACTN4-206ENST00000489451 SF3B3Q15393 1217 aaKnown RBP15.32■□□□□ 0.04
ACTN4-206ENST00000489451 USP50Q70EL3 339 aaPredicted RBP15.32■□□□□ 0.04
ACTN4-206ENST00000489451 DDX46Q7L014 1031 aaKnown RBP15.32■□□□□ 0.04
ACTN4-206ENST00000489451 SCN9AQ15858 1988 aa15.31■□□□□ 0.04
ACTN4-206ENST00000489451 APAF1O14727 1248 aa15.31■□□□□ 0.04
ACTN4-206ENST00000489451 RAD17O75943 681 aa15.31■□□□□ 0.04
ACTN4-206ENST00000489451 HIRAP54198 1017 aaPredicted RBP15.31■□□□□ 0.04
ACTN4-206ENST00000489451 GRM1Q13255 1194 aa15.31■□□□□ 0.04
ACTN4-206ENST00000489451 SUPT20HQ8NEM7 779 aa15.31■□□□□ 0.04
ACTN4-206ENST00000489451 PHAXQ9H814 394 aaKnown RBP15.31■□□□□ 0.04
ACTN4-206ENST00000489451 ADARB2Q9NS39 739 aaKnown RBP15.31■□□□□ 0.04
ACTN4-206ENST00000489451 ZEB1P37275 1124 aaPredicted RBP15.3■□□□□ 0.04
ACTN4-206ENST00000489451 SOX10P56693 466 aa15.3■□□□□ 0.04
ACTN4-206ENST00000489451 TRIM28Q13263 835 aaKnown RBP15.3■□□□□ 0.04
ACTN4-206ENST00000489451 CCDC184Q52MB2 194 aa15.3■□□□□ 0.04
ACTN4-206ENST00000489451 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
ACTN4-206ENST00000489451 PIAS4Q8N2W9 510 aaPredicted RBP15.3■□□□□ 0.04
ACTN4-206ENST00000489451 TRPM4Q8TD43 1214 aa15.3■□□□□ 0.04
ACTN4-206ENST00000489451 ECE1P42892 770 aa15.29■□□□□ 0.04
ACTN4-206ENST00000489451 CIAPIN1Q6FI81 312 aa15.29■□□□□ 0.04
ACTN4-206ENST00000489451 C8orf58Q8NAV2 365 aa15.29■□□□□ 0.04
ACTN4-206ENST00000489451 CAPNS2Q96L46 248 aa15.29■□□□□ 0.04
ACTN4-206ENST00000489451 IFT57Q9NWB7 429 aa15.29■□□□□ 0.04
ACTN4-206ENST00000489451 HYPKQ9NX55 129 aa15.29■□□□□ 0.04
ACTN4-206ENST00000489451 POLLQ9UGP5 575 aa15.29■□□□□ 0.04
ACTN4-206ENST00000489451 PGAP2Q9UHJ9 254 aa15.29■□□□□ 0.04
ACTN4-206ENST00000489451 ELL2O00472 640 aaPredicted RBP15.28■□□□□ 0.04
ACTN4-206ENST00000489451 GPSM2P81274 684 aa15.28■□□□□ 0.04
ACTN4-206ENST00000489451 GPR101Q96P66 508 aaPredicted RBP15.28■□□□□ 0.04
ACTN4-206ENST00000489451 RTL9Q8NET4 1388 aa15.27■□□□□ 0.04
ACTN4-206ENST00000489451 CDHR2Q9BYE9 1310 aa15.27■□□□□ 0.04
ACTN4-206ENST00000489451 IRS4O14654 1257 aaPredicted RBP15.27■□□□□ 0.04
ACTN4-206ENST00000489451 CYP4F22Q6NT55 531 aa15.27■□□□□ 0.04
ACTN4-206ENST00000489451 TMC4Q7Z404 712 aa15.27■□□□□ 0.04
ACTN4-206ENST00000489451 TSPYL6Q8N831 410 aa15.27■□□□□ 0.04
ACTN4-206ENST00000489451 GLIS2Q9BZE0 524 aaPredicted RBP15.27■□□□□ 0.04
ACTN4-206ENST00000489451 TMX4Q9H1E5 349 aaPredicted RBP15.27■□□□□ 0.04
ACTN4-206ENST00000489451 KCNQ5Q9NR82 932 aa15.27■□□□□ 0.04
ACTN4-206ENST00000489451 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
ACTN4-206ENST00000489451 TLL2Q9Y6L7 1015 aa15.27■□□□□ 0.04
ACTN4-206ENST00000489451 EGFRP00533 1210 aa15.26■□□□□ 0.03
ACTN4-206ENST00000489451 DLK2Q6UY11 383 aa15.26■□□□□ 0.03
ACTN4-206ENST00000489451 GCC1Q96CN9 775 aa15.26■□□□□ 0.03
ACTN4-206ENST00000489451 DBNDD1Q9H9R9 158 aa15.26■□□□□ 0.03
ACTN4-206ENST00000489451 SEC31BQ9NQW1 1179 aa15.26■□□□□ 0.03
ACTN4-206ENST00000489451 ZNF646O15015 1829 aaPredicted RBP15.25■□□□□ 0.03
ACTN4-206ENST00000489451 PSME4Q14997 1843 aa15.25■□□□□ 0.03
ACTN4-206ENST00000489451 PSMD14O00487 310 aa15.25■□□□□ 0.03
ACTN4-206ENST00000489451 ZBTB38Q8NAP3 1195 aaPredicted RBP15.25■□□□□ 0.03
ACTN4-206ENST00000489451 JARID2Q92833 1246 aaPredicted RBP15.25■□□□□ 0.03
ACTN4-206ENST00000489451 MYD88Q99836 296 aa15.25■□□□□ 0.03
ACTN4-206ENST00000489451 NSFL1CQ9UNZ2 370 aaKnown RBP15.25■□□□□ 0.03
ACTN4-206ENST00000489451 POLR2AP24928 1970 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms