RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 G3BP1Q13283 466 aaKnown RBP eCLIP15.84■□□□□ 0.13
TOP3A-206ENST00000489131 SF3B3Q15393 1217 aaKnown RBP15.84■□□□□ 0.13
TOP3A-206ENST00000489131 RTL5Q5HYW3 569 aaPredicted RBP15.84■□□□□ 0.13
TOP3A-206ENST00000489131 NFIXQ14938 502 aa15.83■□□□□ 0.12
TOP3A-206ENST00000489131 CCDC57Q2TAC2 916 aa15.83■□□□□ 0.12
TOP3A-206ENST00000489131 FAM161AQ3B820 660 aa15.83■□□□□ 0.12
TOP3A-206ENST00000489131 ATG9AQ7Z3C6 839 aa15.83■□□□□ 0.12
TOP3A-206ENST00000489131 GPR108Q9NPR9 543 aa15.83■□□□□ 0.12
TOP3A-206ENST00000489131 TFCP2L1Q9NZI6 479 aa15.83■□□□□ 0.12
TOP3A-206ENST00000489131 EYA2O00167 538 aa15.82■□□□□ 0.12
TOP3A-206ENST00000489131 SMARCA5O60264 1052 aaPredicted RBP15.82■□□□□ 0.12
TOP3A-206ENST00000489131 IL15P40933 162 aaPredicted RBP15.82■□□□□ 0.12
TOP3A-206ENST00000489131 EN1Q05925 392 aaPredicted RBP15.82■□□□□ 0.12
TOP3A-206ENST00000489131 IFIT5Q13325 482 aaKnown RBP15.82■□□□□ 0.12
TOP3A-206ENST00000489131 SF3B2Q13435 895 aaKnown RBP15.82■□□□□ 0.12
TOP3A-206ENST00000489131 EZH2Q15910 746 aaKnown RBP15.82■□□□□ 0.12
TOP3A-206ENST00000489131 TPTE2Q6XPS3 522 aa15.82■□□□□ 0.12
TOP3A-206ENST00000489131 GREM2Q9H772 168 aa15.82■□□□□ 0.12
TOP3A-206ENST00000489131 PNPLA7Q6ZV29 1317 aa15.82■□□□□ 0.12
TOP3A-206ENST00000489131 PDE1AP54750 535 aa15.81■□□□□ 0.12
TOP3A-206ENST00000489131 ERFEQ4G0M1 354 aa15.81■□□□□ 0.12
TOP3A-206ENST00000489131 COL23A1Q86Y22 540 aaPredicted RBP15.81■□□□□ 0.12
TOP3A-206ENST00000489131 C16orf71Q8IYS4 520 aaPredicted RBP15.81■□□□□ 0.12
TOP3A-206ENST00000489131 CLASRPQ8N2M8 674 aaKnown RBP15.81■□□□□ 0.12
TOP3A-206ENST00000489131 KLHDC4Q8TBB5 520 aa15.81■□□□□ 0.12
TOP3A-206ENST00000489131 ABCC12Q96J65 1359 aa15.81■□□□□ 0.12
TOP3A-206ENST00000489131 TTC41PQ6P2S7 1318 aa15.8■□□□□ 0.12
TOP3A-206ENST00000489131 ANKRD18BA2A2Z9 1011 aa15.8■□□□□ 0.12
TOP3A-206ENST00000489131 MX1P20591 662 aa15.8■□□□□ 0.12
TOP3A-206ENST00000489131 ITGA6P23229 1130 aa15.8■□□□□ 0.12
TOP3A-206ENST00000489131 OS9Q13438 667 aaPredicted RBP15.8■□□□□ 0.12
TOP3A-206ENST00000489131 SLC15A2Q16348 729 aa15.8■□□□□ 0.12
TOP3A-206ENST00000489131 C8orf34Q49A92 452 aa15.8■□□□□ 0.12
TOP3A-206ENST00000489131 CCDC152Q4G0S7 254 aa15.8■□□□□ 0.12
TOP3A-206ENST00000489131 TTC22Q5TAA0 569 aa15.8■□□□□ 0.12
TOP3A-206ENST00000489131 NBPF5PQ86XG9 351 aaPredicted RBP15.8■□□□□ 0.12
TOP3A-206ENST00000489131 NLGN1Q8N2Q7 840 aa15.8■□□□□ 0.12
TOP3A-206ENST00000489131 OTUD7AQ8TE49 926 aaPredicted RBP15.8■□□□□ 0.12
TOP3A-206ENST00000489131 BACH2Q9BYV9 841 aa15.8■□□□□ 0.12
TOP3A-206ENST00000489131 APBB1O00213 710 aa15.79■□□□□ 0.12
TOP3A-206ENST00000489131 HCLS1P14317 486 aaPredicted RBP15.79■□□□□ 0.12
TOP3A-206ENST00000489131 NUTM1Q86Y26 1132 aa15.79■□□□□ 0.12
TOP3A-206ENST00000489131 ANO8Q9HCE9 1232 aaPredicted RBP15.79■□□□□ 0.12
TOP3A-206ENST00000489131 IL1RAPL2Q9NP60 686 aa15.79■□□□□ 0.12
TOP3A-206ENST00000489131 RIPOR2Q9Y4F9 1068 aa15.79■□□□□ 0.12
TOP3A-206ENST00000489131 TNRC6CQ9HCJ0 1690 aaKnown RBP15.79■□□□□ 0.12
TOP3A-206ENST00000489131 POLRMTO00411 1230 aaKnown RBP15.78■□□□□ 0.12
TOP3A-206ENST00000489131 BICDL1Q6ZP65 573 aa15.78■□□□□ 0.12
TOP3A-206ENST00000489131 SIL1Q9H173 461 aa15.78■□□□□ 0.12
TOP3A-206ENST00000489131 STK32BQ9NY57 414 aa15.78■□□□□ 0.12
TOP3A-206ENST00000489131 CHMP3Q9Y3E7 222 aa15.78■□□□□ 0.12
TOP3A-206ENST00000489131 ZNF609O15014 1411 aa15.77■□□□□ 0.12
TOP3A-206ENST00000489131 GSPT1P15170 499 aaKnown RBP15.77■□□□□ 0.12
TOP3A-206ENST00000489131 TNNI3KQ59H18 835 aa15.77■□□□□ 0.12
TOP3A-206ENST00000489131 CNBD1Q8NA66 436 aa15.77■□□□□ 0.12
TOP3A-206ENST00000489131 EAF2Q96CJ1 260 aaPredicted RBP15.77■□□□□ 0.12
TOP3A-206ENST00000489131 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.77■□□□□ 0.12
TOP3A-206ENST00000489131 FPGT-TNNI3KV9GXZ4 949 aa15.77■□□□□ 0.12
TOP3A-206ENST00000489131 KLRG2A4D1S0 409 aaPredicted RBP15.76■□□□□ 0.11
TOP3A-206ENST00000489131 FAM177BA6PVY3 158 aa15.76■□□□□ 0.11
TOP3A-206ENST00000489131 DDR1Q08345 913 aa15.76■□□□□ 0.11
TOP3A-206ENST00000489131 TFCP2Q12800 502 aa15.76■□□□□ 0.11
TOP3A-206ENST00000489131 LRRC24Q50LG9 513 aa15.76■□□□□ 0.11
TOP3A-206ENST00000489131 PRR5LQ6MZQ0 368 aa15.76■□□□□ 0.11
TOP3A-206ENST00000489131 VGLL2Q8N8G2 317 aa15.76■□□□□ 0.11
TOP3A-206ENST00000489131 PI4K2BQ8TCG2 481 aa15.76■□□□□ 0.11
TOP3A-206ENST00000489131 UPF1Q92900 1129 aaKnown RBP eCLIP15.76■□□□□ 0.119e-9■■■■■ 37.2
TOP3A-206ENST00000489131 ZNF594Q96JF6 807 aaPredicted RBP15.76■□□□□ 0.11
TOP3A-206ENST00000489131 TSHZ2Q9NRE2 1034 aa15.76■□□□□ 0.11
TOP3A-206ENST00000489131 ARAP2Q8WZ64 1704 aa15.76■□□□□ 0.11
TOP3A-206ENST00000489131 A0A1B0GUL6 1792 aa15.75■□□□□ 0.11
TOP3A-206ENST00000489131 MROH5Q6ZUA9 1318 aa15.75■□□□□ 0.11
TOP3A-206ENST00000489131 SERPINB2P05120 415 aa15.75■□□□□ 0.11
TOP3A-206ENST00000489131 CRY2Q49AN0 593 aa15.75■□□□□ 0.11
TOP3A-206ENST00000489131 C3orf67Q6ZVT6 689 aa15.75■□□□□ 0.11
TOP3A-206ENST00000489131 NLRP3Q96P20 1036 aa15.75■□□□□ 0.11
TOP3A-206ENST00000489131 CDC5LQ99459 802 aaKnown RBP15.75■□□□□ 0.11
TOP3A-206ENST00000489131 PUS3Q9BZE2 481 aaKnown RBP15.75■□□□□ 0.11
TOP3A-206ENST00000489131 IFIT2P09913 472 aaKnown RBP15.74■□□□□ 0.11
TOP3A-206ENST00000489131 GTF2E1P29083 439 aaPredicted RBP15.74■□□□□ 0.11
TOP3A-206ENST00000489131 TAF7LQ5H9L4 462 aa15.74■□□□□ 0.11
TOP3A-206ENST00000489131 LDHAL6AQ6ZMR3 332 aa15.74■□□□□ 0.11
TOP3A-206ENST00000489131 DEFB132Q7Z7B7 95 aa15.74■□□□□ 0.11
TOP3A-206ENST00000489131 AACSQ86V21 672 aa15.74■□□□□ 0.11
TOP3A-206ENST00000489131 GPATCH3Q96I76 525 aa15.74■□□□□ 0.11
TOP3A-206ENST00000489131 ECHDC1Q9NTX5 307 aa15.74■□□□□ 0.11
TOP3A-206ENST00000489131 AKAP2Q9Y2D5 859 aa15.74■□□□□ 0.11
TOP3A-206ENST00000489131 COL4A1P02462 1669 aa15.73■□□□□ 0.11
TOP3A-206ENST00000489131 GLRX3O76003 335 aaKnown RBP15.73■□□□□ 0.11
TOP3A-206ENST00000489131 CEP126Q9P2H0 1117 aa15.73■□□□□ 0.11
TOP3A-206ENST00000489131 ANKRD31Q8N7Z5 1873 aa15.72■□□□□ 0.11
TOP3A-206ENST00000489131 ERC2O15083 957 aa15.72■□□□□ 0.11
TOP3A-206ENST00000489131 ST5P78524 1137 aa15.72■□□□□ 0.11
TOP3A-206ENST00000489131 CCDC85AQ96PX6 553 aaPredicted RBP15.72■□□□□ 0.11
TOP3A-206ENST00000489131 SEC31BQ9NQW1 1179 aa15.72■□□□□ 0.11
TOP3A-206ENST00000489131 BSDC1Q9NW68 430 aaPredicted RBP15.72■□□□□ 0.11
TOP3A-206ENST00000489131 DBNLQ9UJU6 430 aaKnown RBP15.72■□□□□ 0.11
TOP3A-206ENST00000489131 PDE8BO95263 885 aa15.71■□□□□ 0.11
TOP3A-206ENST00000489131 ATP5JP18859 108 aa15.71■□□□□ 0.11
TOP3A-206ENST00000489131 SDSP20132 328 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms