RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 ZBTB42B2RXF5 422 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 M0R082 166 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 GNB5O14775 395 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 XYLBO75191 536 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 ITGB2P05107 769 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 RARAP10276 462 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 ZAP70P43403 619 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 MTMR3Q13615 1198 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 C20orf204Q6ZNR8 217 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 ATCAYQ86WG3 371 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 MICALL1Q8N3F8 863 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 KCTD17Q8N5Z5 321 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 ZNF417Q8TAU3 575 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 HELQQ8TDG4 1101 aa5.02□□□□□ -1.61
CALD1-221ENST00000489019 GTF3C2Q8WUA4 911 aaPredicted RBP5.02□□□□□ -1.61
CALD1-221ENST00000489019 ZNF587Q96SQ5 575 aaPredicted RBP5.02□□□□□ -1.61
CALD1-221ENST00000489019 CCDC180Q9P1Z9 1646 aa5.01□□□□□ -1.61
CALD1-221ENST00000489019 MAP3K6O95382 1288 aa5.01□□□□□ -1.61
CALD1-221ENST00000489019 DHX32Q7L7V1 743 aaKnown RBP5.01□□□□□ -1.61
CALD1-221ENST00000489019 RETREG2Q8NC44 543 aa5.01□□□□□ -1.61
CALD1-221ENST00000489019 GPR152Q8TDT2 470 aa5.01□□□□□ -1.61
CALD1-221ENST00000489019 USTQ9Y2C2 406 aa5.01□□□□□ -1.61
CALD1-221ENST00000489019 KRBA1A5PL33 1030 aa5□□□□□ -1.61
CALD1-221ENST00000489019 MMP20O60882 483 aa5□□□□□ -1.61
CALD1-221ENST00000489019 NID1P14543 1247 aa5□□□□□ -1.61
CALD1-221ENST00000489019 MPSTP25325 297 aa5□□□□□ -1.61
CALD1-221ENST00000489019 MLLT1Q03111 559 aaPredicted RBP5□□□□□ -1.61
CALD1-221ENST00000489019 ABTB2Q8N961 1025 aa5□□□□□ -1.61
CALD1-221ENST00000489019 TRPM4Q8TD43 1214 aa5□□□□□ -1.61
CALD1-221ENST00000489019 NUDT8Q8WV74 236 aa5□□□□□ -1.61
CALD1-221ENST00000489019 PLVAPQ9BX97 442 aa5□□□□□ -1.61
CALD1-221ENST00000489019 CPB1P15086 417 aa4.99□□□□□ -1.61
CALD1-221ENST00000489019 PLAURQ03405 335 aa4.99□□□□□ -1.61
CALD1-221ENST00000489019 PLA2G4EQ3MJ16 856 aa4.99□□□□□ -1.61
CALD1-221ENST00000489019 PSAPL1Q6NUJ1 521 aa4.99□□□□□ -1.61
CALD1-221ENST00000489019 HFE2Q6ZVN8 426 aa4.99□□□□□ -1.61
CALD1-221ENST00000489019 FAM35AQ86V20 835 aa4.99□□□□□ -1.61
CALD1-221ENST00000489019 PIK3R5Q8WYR1 880 aa4.99□□□□□ -1.61
CALD1-221ENST00000489019 PRDM6Q9NQX0 595 aa4.99□□□□□ -1.61
CALD1-221ENST00000489019 TLR7Q9NYK1 1049 aaKnown RBP4.99□□□□□ -1.61
CALD1-221ENST00000489019 UBAP1LF5GYI3 381 aa4.98□□□□□ -1.61
CALD1-221ENST00000489019 PIK3R2O00459 728 aa4.98□□□□□ -1.61
CALD1-221ENST00000489019 EIF1AXP47813 144 aaKnown RBP4.98□□□□□ -1.61
CALD1-221ENST00000489019 GPLD1P80108 840 aa4.98□□□□□ -1.61
CALD1-221ENST00000489019 PERM1Q5SV97 790 aa4.98□□□□□ -1.61
CALD1-221ENST00000489019 NLRP13Q86W25 1043 aa4.98□□□□□ -1.61
CALD1-221ENST00000489019 NUDT16Q96DE0 195 aaKnown RBP4.98□□□□□ -1.61
CALD1-221ENST00000489019 LPIN3Q9BQK8 851 aa4.98□□□□□ -1.61
CALD1-221ENST00000489019 JPH1Q9HDC5 661 aaPredicted RBP4.98□□□□□ -1.61
CALD1-221ENST00000489019 ANO2Q9NQ90 1003 aa4.98□□□□□ -1.61
CALD1-221ENST00000489019 LILRB5O75023 590 aa4.97□□□□□ -1.61
CALD1-221ENST00000489019 NPR3P17342 541 aa4.97□□□□□ -1.61
CALD1-221ENST00000489019 SERPINB4P48594 390 aa4.97□□□□□ -1.61
CALD1-221ENST00000489019 AFF1P51825 1210 aaKnown RBP4.97□□□□□ -1.61
CALD1-221ENST00000489019 NRLP54845 237 aa4.97□□□□□ -1.61
CALD1-221ENST00000489019 ZNF211Q13398 564 aaPredicted RBP4.97□□□□□ -1.61
CALD1-221ENST00000489019 GRIK5Q16478 980 aa4.97□□□□□ -1.61
CALD1-221ENST00000489019 NOM1Q5C9Z4 860 aaKnown RBP4.97□□□□□ -1.61
CALD1-221ENST00000489019 GPAT2Q6NUI2 795 aa4.97□□□□□ -1.61
CALD1-221ENST00000489019 ILDR2Q71H61 639 aa4.97□□□□□ -1.61
CALD1-221ENST00000489019 EDEM1Q92611 657 aa4.97□□□□□ -1.61
CALD1-221ENST00000489019 NSUN5Q96P11 429 aaKnown RBP4.97□□□□□ -1.61
CALD1-221ENST00000489019 FAM13BQ9NYF5 915 aa4.97□□□□□ -1.61
CALD1-221ENST00000489019 NOP53Q9NZM5 478 aaKnown RBP4.97□□□□□ -1.61
CALD1-221ENST00000489019 A6NHS1 94 aa4.96□□□□□ -1.62
CALD1-221ENST00000489019 FAM229AH3BQW9 127 aa4.96□□□□□ -1.62
CALD1-221ENST00000489019 J3QW42 95 aa4.96□□□□□ -1.62
CALD1-221ENST00000489019 ABL1P00519 1130 aa4.96□□□□□ -1.62
CALD1-221ENST00000489019 PDGFAP04085 211 aa4.96□□□□□ -1.62
CALD1-221ENST00000489019 PSAPP07602 524 aa4.96□□□□□ -1.62
CALD1-221ENST00000489019 HOXD8P13378 290 aaPredicted RBP4.96□□□□□ -1.62
CALD1-221ENST00000489019 SOX18P35713 384 aa4.96□□□□□ -1.62
CALD1-221ENST00000489019 DNM1Q05193 864 aaKnown RBP4.96□□□□□ -1.62
CALD1-221ENST00000489019 PCSK7Q16549 785 aa4.96□□□□□ -1.62
CALD1-221ENST00000489019 ECM1Q16610 540 aa4.96□□□□□ -1.62
CALD1-221ENST00000489019 COL13A1Q5TAT6 717 aaPredicted RBP4.96□□□□□ -1.62
CALD1-221ENST00000489019 ALYREFQ86V81 257 aaKnown RBP4.96□□□□□ -1.62
CALD1-221ENST00000489019 OR13H1Q8NG92 308 aa4.96□□□□□ -1.62
CALD1-221ENST00000489019 GGNBP2Q9H3C7 697 aa4.96□□□□□ -1.62
CALD1-221ENST00000489019 TMEM63CQ9P1W3 806 aa4.96□□□□□ -1.62
CALD1-221ENST00000489019 LOC102724428A0A0B4J2F2 783 aa4.95□□□□□ -1.62
CALD1-221ENST00000489019 RGS9O75916 674 aaPredicted RBP4.95□□□□□ -1.62
CALD1-221ENST00000489019 PROCP04070 461 aa4.95□□□□□ -1.62
CALD1-221ENST00000489019 CYP2E1P05181 493 aaPredicted RBP4.95□□□□□ -1.62
CALD1-221ENST00000489019 EIF2AK2P19525 551 aaKnown RBP4.95□□□□□ -1.62
CALD1-221ENST00000489019 CHRNA4P43681 627 aa4.95□□□□□ -1.62
CALD1-221ENST00000489019 SIK1P57059 783 aa4.95□□□□□ -1.62
CALD1-221ENST00000489019 FKBP4Q02790 459 aaKnown RBP eCLIP4.95□□□□□ -1.62
CALD1-221ENST00000489019 ELMSAN1Q6PJG2 1045 aa4.95□□□□□ -1.62
CALD1-221ENST00000489019 SPOCK3Q9BQ16 436 aa4.95□□□□□ -1.62
CALD1-221ENST00000489019 SMG9Q9H0W8 520 aaKnown RBP4.95□□□□□ -1.62
CALD1-221ENST00000489019 ELP3Q9H9T3 547 aa4.95□□□□□ -1.62
CALD1-221ENST00000489019 FRRS1LQ9P0K9 344 aa4.95□□□□□ -1.62
CALD1-221ENST00000489019 POLIQ9UNA4 740 aa4.95□□□□□ -1.62
CALD1-221ENST00000489019 FNDC3AQ9Y2H6 1198 aaKnown RBP4.95□□□□□ -1.62
CALD1-221ENST00000489019 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.95□□□□□ -1.62
CALD1-221ENST00000489019 C1QTNF9BB2RNN3 333 aa4.94□□□□□ -1.62
CALD1-221ENST00000489019 FZD6O60353 706 aa4.94□□□□□ -1.62
CALD1-221ENST00000489019 FAM13AO94988 1023 aa4.94□□□□□ -1.62
CALD1-221ENST00000489019 SPATA31C1P0DKV0 1188 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms