RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 NRXN2Q9P2S2 1712 aa8.53□□□□□ -1.04
PDAP1-203ENST00000488214 ANKRD31Q8N7Z5 1873 aa8.53□□□□□ -1.04
PDAP1-203ENST00000488214 MYH13Q9UKX3 1938 aa8.52□□□□□ -1.04
PDAP1-203ENST00000488214 COL11A2P13942 1736 aaPredicted RBP8.52□□□□□ -1.05
PDAP1-203ENST00000488214 PLSCR1O15162 318 aa8.52□□□□□ -1.05
PDAP1-203ENST00000488214 NPHP1O15259 732 aa8.52□□□□□ -1.05
PDAP1-203ENST00000488214 HCLS1P14317 486 aaPredicted RBP8.52□□□□□ -1.05
PDAP1-203ENST00000488214 HMGB2P26583 209 aaKnown RBP8.52□□□□□ -1.05
PDAP1-203ENST00000488214 PTPN12Q05209 780 aaKnown RBP8.52□□□□□ -1.05
PDAP1-203ENST00000488214 C8orf34Q49A92 452 aa8.52□□□□□ -1.05
PDAP1-203ENST00000488214 TTC22Q5TAA0 569 aa8.52□□□□□ -1.05
PDAP1-203ENST00000488214 TSHZ3Q63HK5 1081 aa8.52□□□□□ -1.05
PDAP1-203ENST00000488214 ILDR1Q86SU0 546 aaPredicted RBP8.52□□□□□ -1.05
PDAP1-203ENST00000488214 PLEKHM2Q8IWE5 1019 aa8.52□□□□□ -1.05
PDAP1-203ENST00000488214 PROM2Q8N271 834 aa8.52□□□□□ -1.05
PDAP1-203ENST00000488214 ZNF594Q96JF6 807 aaPredicted RBP8.52□□□□□ -1.05
PDAP1-203ENST00000488214 COPRSQ9NQ92 184 aa8.52□□□□□ -1.05
PDAP1-203ENST00000488214 MYH7P12883 1935 aa8.51□□□□□ -1.05
PDAP1-203ENST00000488214 PDE8AO60658 829 aa8.51□□□□□ -1.05
PDAP1-203ENST00000488214 IFIT5Q13325 482 aaKnown RBP8.51□□□□□ -1.05
PDAP1-203ENST00000488214 SF3B2Q13435 895 aaKnown RBP8.51□□□□□ -1.05
PDAP1-203ENST00000488214 CCDC57Q2TAC2 916 aa8.51□□□□□ -1.05
PDAP1-203ENST00000488214 ERFEQ4G0M1 354 aa8.51□□□□□ -1.05
PDAP1-203ENST00000488214 BMP2KLQ5H9B9 411 aa8.51□□□□□ -1.05
PDAP1-203ENST00000488214 AACSQ86V21 672 aa8.51□□□□□ -1.05
PDAP1-203ENST00000488214 NBPF5PQ86XG9 351 aaPredicted RBP8.51□□□□□ -1.05
PDAP1-203ENST00000488214 CLASRPQ8N2M8 674 aaKnown RBP8.51□□□□□ -1.05
PDAP1-203ENST00000488214 SETDB2Q96T68 719 aa8.51□□□□□ -1.05
PDAP1-203ENST00000488214 BACH2Q9BYV9 841 aa8.51□□□□□ -1.05
PDAP1-203ENST00000488214 NYXQ9GZU5 481 aa8.51□□□□□ -1.05
PDAP1-203ENST00000488214 GREM2Q9H772 168 aa8.51□□□□□ -1.05
PDAP1-203ENST00000488214 TFCP2L1Q9NZI6 479 aa8.51□□□□□ -1.05
PDAP1-203ENST00000488214 SALL3Q9BXA9 1300 aa8.51□□□□□ -1.05
PDAP1-203ENST00000488214 ANKRD18BA2A2Z9 1011 aa8.5□□□□□ -1.05
PDAP1-203ENST00000488214 MSH5O43196 834 aa8.5□□□□□ -1.05
PDAP1-203ENST00000488214 SASH1O94885 1247 aa8.5□□□□□ -1.05
PDAP1-203ENST00000488214 IFIT2P09913 472 aaKnown RBP8.5□□□□□ -1.05
PDAP1-203ENST00000488214 HSP90B1P14625 803 aaKnown RBP8.5□□□□□ -1.05
PDAP1-203ENST00000488214 GSPT1P15170 499 aaKnown RBP8.5□□□□□ -1.05
PDAP1-203ENST00000488214 ITGA6P23229 1130 aa8.5□□□□□ -1.05
PDAP1-203ENST00000488214 GTF2E1P29083 439 aaPredicted RBP8.5□□□□□ -1.05
PDAP1-203ENST00000488214 PDE1AP54750 535 aa8.5□□□□□ -1.05
PDAP1-203ENST00000488214 EN1Q05925 392 aaPredicted RBP8.5□□□□□ -1.05
PDAP1-203ENST00000488214 EZH2Q15910 746 aaKnown RBP8.5□□□□□ -1.05
PDAP1-203ENST00000488214 TTLL11Q8NHH1 800 aa8.5□□□□□ -1.05
PDAP1-203ENST00000488214 AKT1S1Q96B36 256 aa8.5□□□□□ -1.05
PDAP1-203ENST00000488214 GPATCH3Q96I76 525 aa8.5□□□□□ -1.05
PDAP1-203ENST00000488214 AOX1Q06278 1338 aa8.5□□□□□ -1.05
PDAP1-203ENST00000488214 LRRC37AA6NMS7 1700 aa8.49□□□□□ -1.05
PDAP1-203ENST00000488214 EYA2O00167 538 aa8.49□□□□□ -1.05
PDAP1-203ENST00000488214 CIAO1O76071 339 aa8.49□□□□□ -1.05
PDAP1-203ENST00000488214 CSF1RP07333 972 aa8.49□□□□□ -1.05
PDAP1-203ENST00000488214 GYS1P13807 737 aa8.49□□□□□ -1.05
PDAP1-203ENST00000488214 IL15P40933 162 aaPredicted RBP8.49□□□□□ -1.05
PDAP1-203ENST00000488214 BAG6P46379 1132 aa8.49□□□□□ -1.05
PDAP1-203ENST00000488214 TFCP2Q12800 502 aa8.49□□□□□ -1.05
PDAP1-203ENST00000488214 NFIXQ14938 502 aa8.49□□□□□ -1.05
PDAP1-203ENST00000488214 CCDC152Q4G0S7 254 aa8.49□□□□□ -1.05
PDAP1-203ENST00000488214 CCDC24Q8N4L8 307 aa8.49□□□□□ -1.05
PDAP1-203ENST00000488214 CNBD1Q8NA66 436 aa8.49□□□□□ -1.05
PDAP1-203ENST00000488214 ANO8Q9HCE9 1232 aaPredicted RBP8.49□□□□□ -1.05
PDAP1-203ENST00000488214 TLR7Q9NYK1 1049 aaKnown RBP8.49□□□□□ -1.05
PDAP1-203ENST00000488214 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.49□□□□□ -1.05
PDAP1-203ENST00000488214 PNPLA7Q6ZV29 1317 aa8.49□□□□□ -1.05
PDAP1-203ENST00000488214 RTL9Q8NET4 1388 aa8.48□□□□□ -1.05
PDAP1-203ENST00000488214 CDC45O75419 566 aa8.48□□□□□ -1.05
PDAP1-203ENST00000488214 LRRC24Q50LG9 513 aa8.48□□□□□ -1.05
PDAP1-203ENST00000488214 TNNI3KQ59H18 835 aa8.48□□□□□ -1.05
PDAP1-203ENST00000488214 C3orf67Q6ZVT6 689 aa8.48□□□□□ -1.05
PDAP1-203ENST00000488214 ATG9AQ7Z3C6 839 aa8.48□□□□□ -1.05
PDAP1-203ENST00000488214 CAMKK2Q96RR4 588 aa8.48□□□□□ -1.05
PDAP1-203ENST00000488214 PUS3Q9BZE2 481 aaKnown RBP8.48□□□□□ -1.05
PDAP1-203ENST00000488214 CCDC8Q9H0W5 538 aaPredicted RBP8.48□□□□□ -1.05
PDAP1-203ENST00000488214 CNNM1Q9NRU3 951 aa8.48□□□□□ -1.05
PDAP1-203ENST00000488214 STK32BQ9NY57 414 aa8.48□□□□□ -1.05
PDAP1-203ENST00000488214 FPGT-TNNI3KV9GXZ4 949 aa8.48□□□□□ -1.05
PDAP1-203ENST00000488214 TTC41PQ6P2S7 1318 aa8.48□□□□□ -1.05
PDAP1-203ENST00000488214 TRIM6-TRIM34B2RNG4 842 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 IGHMBP2P38935 993 aaKnown RBP8.47□□□□□ -1.05
PDAP1-203ENST00000488214 ST5P78524 1137 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 DDR1Q08345 913 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 METTL24Q5JXM2 366 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 MSL1Q68DK7 614 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 TPTE2Q6XPS3 522 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 DEFB132Q7Z7B7 95 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 COL23A1Q86Y22 540 aaPredicted RBP8.47□□□□□ -1.05
PDAP1-203ENST00000488214 FLAD1Q8NFF5 587 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 EAF2Q96CJ1 260 aaPredicted RBP8.47□□□□□ -1.05
PDAP1-203ENST00000488214 OSBPL3Q9H4L5 887 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 SEC31BQ9NQW1 1179 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 ECHDC1Q9NTX5 307 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 STAP2Q9UGK3 403 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 FBXO3Q9UK99 471 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 RBM19Q9Y4C8 960 aaKnown RBP8.47□□□□□ -1.05
PDAP1-203ENST00000488214 DLEC1Q9Y238 1755 aa8.47□□□□□ -1.05
PDAP1-203ENST00000488214 MYO5AQ9Y4I1 1855 aaKnown RBP8.47□□□□□ -1.05
PDAP1-203ENST00000488214 DOCK2Q92608 1830 aa8.46□□□□□ -1.06
PDAP1-203ENST00000488214 ERC2O15083 957 aa8.46□□□□□ -1.06
PDAP1-203ENST00000488214 MAP4K4O95819 1239 aaPredicted RBP8.46□□□□□ -1.06
PDAP1-203ENST00000488214 SDSP20132 328 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms