RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 POLA2Q14181 598 aa16.72■□□□□ 0.27
COL16A1-214ENST00000488128 ESCO1Q5FWF5 840 aa16.72■□□□□ 0.27
COL16A1-214ENST00000488128 TDRD7Q8NHU6 1098 aaKnown RBP16.72■□□□□ 0.27
COL16A1-214ENST00000488128 MORC2Q9Y6X9 1032 aaPredicted RBP16.72■□□□□ 0.27
COL16A1-214ENST00000488128 NPHP3Q7Z494 1330 aa16.72■□□□□ 0.27
COL16A1-214ENST00000488128 CCDC69A6NI79 296 aa16.72■□□□□ 0.27
COL16A1-214ENST00000488128 BECN2A8MW95 431 aa16.72■□□□□ 0.27
COL16A1-214ENST00000488128 SLC27A2O14975 620 aa16.72■□□□□ 0.27
COL16A1-214ENST00000488128 GORABQ5T7V8 394 aa16.72■□□□□ 0.27
COL16A1-214ENST00000488128 BLOC1S2Q6QNY1 142 aa16.72■□□□□ 0.27
COL16A1-214ENST00000488128 SCAND2PQ9GZW5 306 aaPredicted RBP16.72■□□□□ 0.27
COL16A1-214ENST00000488128 LGR6Q9HBX8 967 aa16.72■□□□□ 0.27
COL16A1-214ENST00000488128 A0A0D9SFI3 127 aa16.71■□□□□ 0.27
COL16A1-214ENST00000488128 NBPF6Q5VWK0 638 aa16.71■□□□□ 0.27
COL16A1-214ENST00000488128 NBPF4Q96M43 638 aa16.71■□□□□ 0.27
COL16A1-214ENST00000488128 TAOK2Q9UL54 1235 aa16.71■□□□□ 0.27
COL16A1-214ENST00000488128 MAP3K5Q99683 1374 aa16.71■□□□□ 0.27
COL16A1-214ENST00000488128 KCNQ3O43525 872 aa16.71■□□□□ 0.27
COL16A1-214ENST00000488128 ERCC6LQ2NKX8 1250 aa16.71■□□□□ 0.27
COL16A1-214ENST00000488128 ECHDC1Q9NTX5 307 aa16.71■□□□□ 0.27
COL16A1-214ENST00000488128 DDX19AQ9NUU7 478 aaKnown RBP16.71■□□□□ 0.27
COL16A1-214ENST00000488128 TLR7Q9NYK1 1049 aaKnown RBP16.71■□□□□ 0.27
COL16A1-214ENST00000488128 CCDC9Q9Y3X0 531 aaKnown RBP16.71■□□□□ 0.27
COL16A1-214ENST00000488128 PSME1Q06323 249 aa16.71■□□□□ 0.26
COL16A1-214ENST00000488128 GABPB1Q06547 395 aaPredicted RBP16.71■□□□□ 0.26
COL16A1-214ENST00000488128 BRF1Q92994 677 aa16.71■□□□□ 0.26
COL16A1-214ENST00000488128 LRRC59Q96AG4 307 aaKnown RBP16.71■□□□□ 0.26
COL16A1-214ENST00000488128 H3BQV1 296 aa16.7■□□□□ 0.26
COL16A1-214ENST00000488128 HTATSF1O43719 755 aaKnown RBP16.7■□□□□ 0.26
COL16A1-214ENST00000488128 IFFO2Q5TF58 517 aa16.7■□□□□ 0.26
COL16A1-214ENST00000488128 LMOD2Q6P5Q4 547 aa16.7■□□□□ 0.26
COL16A1-214ENST00000488128 FMNL2Q96PY5 1086 aa16.7■□□□□ 0.26
COL16A1-214ENST00000488128 HSP90B1P14625 803 aaKnown RBP16.7■□□□□ 0.26
COL16A1-214ENST00000488128 GUCY1B3Q02153 619 aa16.7■□□□□ 0.26
COL16A1-214ENST00000488128 ZNF397Q8NF99 534 aaPredicted RBP16.7■□□□□ 0.26
COL16A1-214ENST00000488128 KLHDC4Q8TBB5 520 aa16.7■□□□□ 0.26
COL16A1-214ENST00000488128 NAP1L2Q9ULW6 460 aaPredicted RBP16.7■□□□□ 0.26
COL16A1-214ENST00000488128 PDCP20941 246 aa16.69■□□□□ 0.26
COL16A1-214ENST00000488128 CDK11BP21127 795 aaKnown RBP16.69■□□□□ 0.26
COL16A1-214ENST00000488128 TOB2Q14106 344 aaPredicted RBP16.69■□□□□ 0.26
COL16A1-214ENST00000488128 ZNF589Q86UQ0 364 aaPredicted RBP16.69■□□□□ 0.26
COL16A1-214ENST00000488128 CWF19L2Q2TBE0 894 aaKnown RBP16.69■□□□□ 0.26
COL16A1-214ENST00000488128 FSD1Q9BTV5 496 aa16.69■□□□□ 0.26
COL16A1-214ENST00000488128 ZNF446Q9NWS9 450 aa16.69■□□□□ 0.26
COL16A1-214ENST00000488128 ELP1O95163 1332 aa16.69■□□□□ 0.26
COL16A1-214ENST00000488128 EPB41L2O43491 1005 aaKnown RBP16.68■□□□□ 0.26
COL16A1-214ENST00000488128 C9orf78Q9NZ63 289 aaPredicted RBP16.68■□□□□ 0.26
COL16A1-214ENST00000488128 IRX5P78411 483 aaPredicted RBP16.68■□□□□ 0.26
COL16A1-214ENST00000488128 IQCB1Q15051 598 aa16.68■□□□□ 0.26
COL16A1-214ENST00000488128 PLCD3Q8N3E9 789 aa16.68■□□□□ 0.26
COL16A1-214ENST00000488128 DNAAF4Q8WXU2 420 aa16.68■□□□□ 0.26
COL16A1-214ENST00000488128 FMN2Q9NZ56 1722 aa16.68■□□□□ 0.26
COL16A1-214ENST00000488128 TM6SF1Q9BZW5 370 aa16.67■□□□□ 0.26
COL16A1-214ENST00000488128 AOPEPQ8N6M6 819 aa16.67■□□□□ 0.26
COL16A1-214ENST00000488128 MAP4K1Q92918 833 aa16.67■□□□□ 0.26
COL16A1-214ENST00000488128 ANKARQ7Z5J8 1434 aa16.67■□□□□ 0.26
COL16A1-214ENST00000488128 PTPN21Q16825 1174 aa16.67■□□□□ 0.26
COL16A1-214ENST00000488128 BEND3Q5T5X7 828 aa16.67■□□□□ 0.26
COL16A1-214ENST00000488128 MPRIPQ6WCQ1 1025 aa16.67■□□□□ 0.26
COL16A1-214ENST00000488128 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.67■□□□□ 0.26
COL16A1-214ENST00000488128 CCAR1Q8IX12 1150 aaKnown RBP16.67■□□□□ 0.26
COL16A1-214ENST00000488128 CCZ1BP86790 482 aa16.66■□□□□ 0.26
COL16A1-214ENST00000488128 CCZ1P86791 482 aaPredicted RBP16.66■□□□□ 0.26
COL16A1-214ENST00000488128 NWD1Q149M9 1564 aa16.66■□□□□ 0.26
COL16A1-214ENST00000488128 SYCP1Q15431 976 aa16.66■□□□□ 0.26
COL16A1-214ENST00000488128 SYT10Q6XYQ8 523 aa16.66■□□□□ 0.26
COL16A1-214ENST00000488128 ANKLE2Q86XL3 938 aa16.66■□□□□ 0.26
COL16A1-214ENST00000488128 EAF2Q96CJ1 260 aaPredicted RBP16.66■□□□□ 0.26
COL16A1-214ENST00000488128 GOLPH3LQ9H4A5 285 aa16.66■□□□□ 0.26
COL16A1-214ENST00000488128 RPS6KB1P23443 525 aa16.66■□□□□ 0.26
COL16A1-214ENST00000488128 NYAP1Q6ZVC0 841 aa16.66■□□□□ 0.26
COL16A1-214ENST00000488128 IP6K1Q92551 441 aa16.66■□□□□ 0.26
COL16A1-214ENST00000488128 POLR3GO15318 223 aaPredicted RBP16.65■□□□□ 0.26
COL16A1-214ENST00000488128 CCDC129Q6ZRS4 1044 aa16.65■□□□□ 0.26
COL16A1-214ENST00000488128 CCAR2Q8N163 923 aaKnown RBP16.65■□□□□ 0.26
COL16A1-214ENST00000488128 EVI5LQ96CN4 794 aa16.65■□□□□ 0.26
COL16A1-214ENST00000488128 ORAI2Q96SN7 254 aa16.65■□□□□ 0.26
COL16A1-214ENST00000488128 ERBB3P21860 1342 aa16.65■□□□□ 0.26
COL16A1-214ENST00000488128 PSMA5P28066 241 aa16.65■□□□□ 0.26
COL16A1-214ENST00000488128 ISM2Q6H9L7 571 aa16.65■□□□□ 0.26
COL16A1-214ENST00000488128 FER1L4A9Z1Z3 1794 aa16.65■□□□□ 0.26
COL16A1-214ENST00000488128 BIN1O00499 593 aa16.64■□□□□ 0.25
COL16A1-214ENST00000488128 SLU7O95391 586 aaKnown RBP16.64■□□□□ 0.25
COL16A1-214ENST00000488128 RBM43Q6ZSC3 357 aaKnown RBP16.64■□□□□ 0.25
COL16A1-214ENST00000488128 SEC62Q99442 399 aaKnown RBP16.64■□□□□ 0.25
COL16A1-214ENST00000488128 TTC41PQ6P2S7 1318 aa16.64■□□□□ 0.25
COL16A1-214ENST00000488128 XRN1Q8IZH2 1706 aaKnown RBP16.64■□□□□ 0.25
COL16A1-214ENST00000488128 CCT2P78371 535 aaKnown RBP16.63■□□□□ 0.25
COL16A1-214ENST00000488128 AIMP1Q12904 312 aaKnown RBP16.63■□□□□ 0.25
COL16A1-214ENST00000488128 GPATCH3Q96I76 525 aa16.63■□□□□ 0.25
COL16A1-214ENST00000488128 EPC1Q9H2F5 836 aa16.63■□□□□ 0.25
COL16A1-214ENST00000488128 SMC2O95347 1197 aa16.63■□□□□ 0.25
COL16A1-214ENST00000488128 ZNF530Q6P9A1 599 aaPredicted RBP16.63■□□□□ 0.25
COL16A1-214ENST00000488128 ME1P48163 572 aa16.63■□□□□ 0.25
COL16A1-214ENST00000488128 RESTQ13127 1097 aa16.63■□□□□ 0.25
COL16A1-214ENST00000488128 SNW1Q13573 536 aaKnown RBP16.63■□□□□ 0.25
COL16A1-214ENST00000488128 HSP90AB4PQ58FF6 505 aa16.63■□□□□ 0.25
COL16A1-214ENST00000488128 TAF3Q5VWG9 929 aa16.63■□□□□ 0.25
COL16A1-214ENST00000488128 Q6ZUG5 572 aa16.63■□□□□ 0.25
COL16A1-214ENST00000488128 DHX40Q8IX18 779 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms