RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 CARMIL3Q8ND23 1372 aa17.95■□□□□ 0.46
GCA-210ENST00000487445 PDE4AP27815 886 aa17.95■□□□□ 0.46
GCA-210ENST00000487445 TM4SF1P30408 202 aa17.95■□□□□ 0.46
GCA-210ENST00000487445 TAF7LQ5H9L4 462 aa17.95■□□□□ 0.46
GCA-210ENST00000487445 MSL1Q68DK7 614 aa17.95■□□□□ 0.46
GCA-210ENST00000487445 ZNF594Q96JF6 807 aaPredicted RBP17.95■□□□□ 0.46
GCA-210ENST00000487445 IL1RAPL2Q9NP60 686 aa17.95■□□□□ 0.46
GCA-210ENST00000487445 ITGA6P23229 1130 aa17.94■□□□□ 0.46
GCA-210ENST00000487445 C16orf71Q8IYS4 520 aaPredicted RBP17.94■□□□□ 0.46
GCA-210ENST00000487445 CNBD1Q8NA66 436 aa17.94■□□□□ 0.46
GCA-210ENST00000487445 RHPN1Q8TCX5 695 aa17.94■□□□□ 0.46
GCA-210ENST00000487445 UPF1Q92900 1129 aaKnown RBP eCLIP17.94■□□□□ 0.46
GCA-210ENST00000487445 COPRSQ9NQ92 184 aa17.94■□□□□ 0.46
GCA-210ENST00000487445 SCN7AQ01118 1682 aa17.94■□□□□ 0.46
GCA-210ENST00000487445 SERPINB2P05120 415 aa17.93■□□□□ 0.46
GCA-210ENST00000487445 BCORQ6W2J9 1755 aa17.93■□□□□ 0.46
GCA-210ENST00000487445 UBR3Q6ZT12 1888 aa17.93■□□□□ 0.46
GCA-210ENST00000487445 ANKRD18BA2A2Z9 1011 aa17.93■□□□□ 0.46
GCA-210ENST00000487445 KIF1BPQ96EK5 621 aa17.93■□□□□ 0.46
GCA-210ENST00000487445 RGPD3A6NKT7 1758 aaPredicted RBP17.93■□□□□ 0.46
GCA-210ENST00000487445 RGPD4Q7Z3J3 1758 aa17.93■□□□□ 0.46
GCA-210ENST00000487445 DDR1Q08345 913 aa17.92■□□□□ 0.46
GCA-210ENST00000487445 CCDC152Q4G0S7 254 aa17.92■□□□□ 0.46
GCA-210ENST00000487445 ERC1Q8IUD2 1116 aa17.92■□□□□ 0.46
GCA-210ENST00000487445 ABCC12Q96J65 1359 aa17.92■□□□□ 0.46
GCA-210ENST00000487445 SLC10A5Q5PT55 438 aa17.91■□□□□ 0.46
GCA-210ENST00000487445 C3orf67Q6ZVT6 689 aa17.91■□□□□ 0.46
GCA-210ENST00000487445 NLRP3Q96P20 1036 aa17.91■□□□□ 0.46
GCA-210ENST00000487445 ANKRD36CQ5JPF3 1778 aa17.91■□□□□ 0.46
GCA-210ENST00000487445 C4AP0C0L4 1744 aa17.91■□□□□ 0.46
GCA-210ENST00000487445 POLRMTO00411 1230 aaKnown RBP17.91■□□□□ 0.46
GCA-210ENST00000487445 PRR5LQ6MZQ0 368 aa17.91■□□□□ 0.46
GCA-210ENST00000487445 PDGFDQ9GZP0 370 aaPredicted RBP17.91■□□□□ 0.46
GCA-210ENST00000487445 SASH1O94885 1247 aa17.9■□□□□ 0.46
GCA-210ENST00000487445 MMP10P09238 476 aa17.9■□□□□ 0.46
GCA-210ENST00000487445 LRRC24Q50LG9 513 aa17.9■□□□□ 0.46
GCA-210ENST00000487445 OTUD7AQ8TE49 926 aaPredicted RBP17.9■□□□□ 0.46
GCA-210ENST00000487445 PUS3Q9BZE2 481 aaKnown RBP17.9■□□□□ 0.46
GCA-210ENST00000487445 SEC31BQ9NQW1 1179 aa17.9■□□□□ 0.46
GCA-210ENST00000487445 EYA2O00167 538 aa17.89■□□□□ 0.45
GCA-210ENST00000487445 ST5P78524 1137 aa17.89■□□□□ 0.45
GCA-210ENST00000487445 LDHAL6AQ6ZMR3 332 aa17.88■□□□□ 0.45
GCA-210ENST00000487445 CLASRPQ8N2M8 674 aaKnown RBP17.88■□□□□ 0.45
GCA-210ENST00000487445 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
GCA-210ENST00000487445 TFCP2Q12800 502 aa17.88■□□□□ 0.45
GCA-210ENST00000487445 SF3B3Q15393 1217 aaKnown RBP17.88■□□□□ 0.45
GCA-210ENST00000487445 CNNM1Q9NRU3 951 aa17.88■□□□□ 0.45
GCA-210ENST00000487445 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.88■□□□□ 0.45
GCA-210ENST00000487445 IL15P40933 162 aaPredicted RBP17.87■□□□□ 0.45
GCA-210ENST00000487445 ATG9AQ7Z3C6 839 aa17.87■□□□□ 0.45
GCA-210ENST00000487445 PLEKHM2Q8IWE5 1019 aa17.86■□□□□ 0.45
GCA-210ENST00000487445 CIAO1O76071 339 aa17.86■□□□□ 0.45
GCA-210ENST00000487445 AACSQ86V21 672 aa17.86■□□□□ 0.45
GCA-210ENST00000487445 MPHOSPH8Q99549 860 aa17.86■□□□□ 0.45
GCA-210ENST00000487445 IFIT2P09913 472 aaKnown RBP17.85■□□□□ 0.45
GCA-210ENST00000487445 IGHMBP2P38935 993 aaKnown RBP17.85■□□□□ 0.45
GCA-210ENST00000487445 CDC5LQ99459 802 aaKnown RBP17.85■□□□□ 0.45
GCA-210ENST00000487445 TSHZ3Q63HK5 1081 aa17.84■□□□□ 0.45
GCA-210ENST00000487445 CCDC8Q9H0W5 538 aaPredicted RBP17.84■□□□□ 0.45
GCA-210ENST00000487445 CEP126Q9P2H0 1117 aa17.84■□□□□ 0.45
GCA-210ENST00000487445 MX1P20591 662 aa17.84■□□□□ 0.45
GCA-210ENST00000487445 METTL24Q5JXM2 366 aa17.84■□□□□ 0.45
GCA-210ENST00000487445 DDX46Q7L014 1031 aaKnown RBP17.84■□□□□ 0.45
GCA-210ENST00000487445 EAF2Q96CJ1 260 aaPredicted RBP17.84■□□□□ 0.45
GCA-210ENST00000487445 FBXO3Q9UK99 471 aa17.84■□□□□ 0.45
GCA-210ENST00000487445 R3HDM1Q15032 1099 aaKnown RBP17.83■□□□□ 0.44
GCA-210ENST00000487445 ANKRD18AQ8IVF6 992 aa17.83■□□□□ 0.44
GCA-210ENST00000487445 RIPOR2Q9Y4F9 1068 aa17.83■□□□□ 0.44
GCA-210ENST00000487445 RTL9Q8NET4 1388 aa17.83■□□□□ 0.44
GCA-210ENST00000487445 PDE1AP54750 535 aa17.82■□□□□ 0.44
GCA-210ENST00000487445 TNNI3KQ59H18 835 aa17.82■□□□□ 0.44
GCA-210ENST00000487445 ILDR2Q71H61 639 aa17.82■□□□□ 0.44
GCA-210ENST00000487445 CELF1Q92879 486 aaKnown RBP17.82■□□□□ 0.44
GCA-210ENST00000487445 FPGT-TNNI3KV9GXZ4 949 aa17.82■□□□□ 0.44
GCA-210ENST00000487445 RPGRQ92834 1020 aaKnown RBP17.82■□□□□ 0.44
GCA-210ENST00000487445 NEUROD6Q96NK8 337 aa17.82■□□□□ 0.44
GCA-210ENST00000487445 HELBQ8NG08 1087 aaPredicted RBP17.81■□□□□ 0.44
GCA-210ENST00000487445 SLC16A10Q8TF71 515 aa17.81■□□□□ 0.44
GCA-210ENST00000487445 TLR7Q9NYK1 1049 aaKnown RBP17.81■□□□□ 0.44
GCA-210ENST00000487445 COL24A1Q17RW2 1714 aa17.8■□□□□ 0.44
GCA-210ENST00000487445 ZBTB7AO95365 584 aa17.8■□□□□ 0.44
GCA-210ENST00000487445 TIMM10P62072 90 aa17.8■□□□□ 0.44
GCA-210ENST00000487445 RPS8P62241 208 aaKnown RBP17.8■□□□□ 0.44
GCA-210ENST00000487445 BRIP1Q9BX63 1249 aa17.8■□□□□ 0.44
GCA-210ENST00000487445 TUBGCP6Q96RT7 1819 aa17.8■□□□□ 0.44
GCA-210ENST00000487445 SALL3Q9BXA9 1300 aa17.79■□□□□ 0.44
GCA-210ENST00000487445 AKAP2Q9Y2D5 859 aa17.79■□□□□ 0.44
GCA-210ENST00000487445 MROH5Q6ZUA9 1318 aa17.78■□□□□ 0.44
GCA-210ENST00000487445 A0A1B0GUL7 405 aa17.78■□□□□ 0.44
GCA-210ENST00000487445 PSDA5PKW4 1024 aaPredicted RBP17.78■□□□□ 0.44
GCA-210ENST00000487445 TAF5LO75529 589 aa17.78■□□□□ 0.44
GCA-210ENST00000487445 CRY2Q49AN0 593 aa17.78■□□□□ 0.44
GCA-210ENST00000487445 TTC22Q5TAA0 569 aa17.78■□□□□ 0.44
GCA-210ENST00000487445 GPATCH3Q96I76 525 aa17.78■□□□□ 0.44
GCA-210ENST00000487445 DBNDD2Q9BQY9 259 aa17.78■□□□□ 0.44
GCA-210ENST00000487445 OSBPL3Q9H4L5 887 aa17.78■□□□□ 0.44
GCA-210ENST00000487445 BSDC1Q9NW68 430 aaPredicted RBP17.78■□□□□ 0.44
GCA-210ENST00000487445 STAP2Q9UGK3 403 aa17.78■□□□□ 0.44
GCA-210ENST00000487445 DDX60Q8IY21 1712 aaKnown RBP17.78■□□□□ 0.44
GCA-210ENST00000487445 PDE8BO95263 885 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms