RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 ABCC12Q96J65 1359 aa8.53□□□□□ -1.04
CTDSPL-208ENST00000486978 HEG1Q9ULI3 1381 aa8.53□□□□□ -1.04
CTDSPL-208ENST00000486978 ADM5C9JUS6 153 aa8.53□□□□□ -1.04
CTDSPL-208ENST00000486978 SLC10A3P09131 477 aa8.53□□□□□ -1.04
CTDSPL-208ENST00000486978 CDC37L1Q7L3B6 337 aa8.53□□□□□ -1.04
CTDSPL-208ENST00000486978 DZIP3Q86Y13 1208 aaKnown RBP8.53□□□□□ -1.04
CTDSPL-208ENST00000486978 IL17REQ8NFR9 667 aa8.53□□□□□ -1.04
CTDSPL-208ENST00000486978 OTUD5Q96G74 571 aa8.53□□□□□ -1.04
CTDSPL-208ENST00000486978 GBA2Q9HCG7 927 aaPredicted RBP8.53□□□□□ -1.04
CTDSPL-208ENST00000486978 TAF1P21675 1872 aa8.53□□□□□ -1.04
CTDSPL-208ENST00000486978 STARD3NLO95772 234 aa8.52□□□□□ -1.05
CTDSPL-208ENST00000486978 EN2P19622 333 aaPredicted RBP8.52□□□□□ -1.05
CTDSPL-208ENST00000486978 ALDH1B1P30837 517 aa8.52□□□□□ -1.05
CTDSPL-208ENST00000486978 ZEB1P37275 1124 aaPredicted RBP8.52□□□□□ -1.05
CTDSPL-208ENST00000486978 MKRN4PQ13434 485 aaPredicted RBP8.52□□□□□ -1.05
CTDSPL-208ENST00000486978 HLFQ16534 295 aa8.52□□□□□ -1.05
CTDSPL-208ENST00000486978 C3orf67Q6ZVT6 689 aa8.52□□□□□ -1.05
CTDSPL-208ENST00000486978 SAMD7Q7Z3H4 446 aa8.52□□□□□ -1.05
CTDSPL-208ENST00000486978 TTC5Q8N0Z6 440 aa8.52□□□□□ -1.05
CTDSPL-208ENST00000486978 USP16Q9Y5T5 823 aa8.52□□□□□ -1.05
CTDSPL-208ENST00000486978 ASTN2O75129 1339 aaPredicted RBP8.52□□□□□ -1.05
CTDSPL-208ENST00000486978 YDJCA8MPS7 323 aa8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 RAD17O75943 681 aa8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 NEFMP07197 916 aa8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 CRY2Q49AN0 593 aa8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 ZNF790Q6PG37 636 aa8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 FBXO46Q6PJ61 603 aaPredicted RBP8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 NUTM1Q86Y26 1132 aa8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 RASAL3Q86YV0 1011 aa8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 NIM1KQ8IY84 436 aa8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 ZC3H15Q8WU90 426 aaKnown RBP8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 RTF1Q92541 710 aaKnown RBP8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 CCDC102AQ96A19 550 aa8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 CNOT7Q9UIV1 285 aaKnown RBP8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 NUP98P52948 1817 aa8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 MYBBP1AQ9BQG0 1328 aaKnown RBP8.51□□□□□ -1.05
CTDSPL-208ENST00000486978 GPR25O00155 361 aa8.5□□□□□ -1.05
CTDSPL-208ENST00000486978 PPIP5K2O43314 1243 aa8.5□□□□□ -1.05
CTDSPL-208ENST00000486978 HTATSF1O43719 755 aaKnown RBP8.5□□□□□ -1.05
CTDSPL-208ENST00000486978 PKN2Q16513 984 aaKnown RBP8.5□□□□□ -1.05
CTDSPL-208ENST00000486978 TPTE2Q6XPS3 522 aa8.5□□□□□ -1.05
CTDSPL-208ENST00000486978 MOB2Q70IA6 237 aa8.5□□□□□ -1.05
CTDSPL-208ENST00000486978 PNNQ9H307 717 aaKnown RBP8.5□□□□□ -1.05
CTDSPL-208ENST00000486978 HDAC9Q9UKV0 1011 aa8.5□□□□□ -1.05
CTDSPL-208ENST00000486978 NIP7Q9Y221 180 aaKnown RBP eCLIP8.5□□□□□ -1.05
CTDSPL-208ENST00000486978 LAMA2P24043 3122 aaKnown RBP8.49□□□□□ -1.05
CTDSPL-208ENST00000486978 BTBD11A6QL63 1104 aa8.49□□□□□ -1.05
CTDSPL-208ENST00000486978 CAP1Q01518 475 aa8.49□□□□□ -1.05
CTDSPL-208ENST00000486978 MCM10Q7L590 875 aa8.49□□□□□ -1.05
CTDSPL-208ENST00000486978 C2orf69Q8N8R5 385 aa8.49□□□□□ -1.05
CTDSPL-208ENST00000486978 FMNL2Q96PY5 1086 aa8.49□□□□□ -1.05
CTDSPL-208ENST00000486978 PLEKHF1Q96S99 279 aa8.49□□□□□ -1.05
CTDSPL-208ENST00000486978 ZNRF3Q9ULT6 936 aa8.49□□□□□ -1.05
CTDSPL-208ENST00000486978 NBPF26B4DH59 902 aa8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 HOXA10P31260 410 aaPredicted RBP8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 DCTN1Q14203 1278 aa8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 TBC1D10BQ4KMP7 808 aaPredicted RBP8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 NBPF10Q6P3W6 841 aaKnown RBP8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 CLEC4GQ6UXB4 293 aa8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 KRT26Q7Z3Y9 468 aa8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 MICALL2Q8IY33 904 aa8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 TEX13AQ9BXU3 409 aaPredicted RBP8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 KCNQ5Q9NR82 932 aa8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 SCAF8Q9UPN6 1271 aaKnown RBP8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 PRUNE2Q8WUY3 3088 aa8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 DLG5Q8TDM6 1919 aa8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 MAPK8IP3Q9UPT6 1336 aa8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 LAMB2P55268 1798 aa8.48□□□□□ -1.05
CTDSPL-208ENST00000486978 H0YGN5 161 aa8.47□□□□□ -1.05
CTDSPL-208ENST00000486978 PPEF1O14829 653 aaPredicted RBP8.47□□□□□ -1.05
CTDSPL-208ENST00000486978 NFE2L2Q16236 605 aa8.47□□□□□ -1.05
CTDSPL-208ENST00000486978 RBM26Q5T8P6 1007 aaKnown RBP8.47□□□□□ -1.05
CTDSPL-208ENST00000486978 CC2D2BQ6DHV5 1058 aa8.47□□□□□ -1.05
CTDSPL-208ENST00000486978 BCL2L13Q9BXK5 485 aa8.47□□□□□ -1.05
CTDSPL-208ENST00000486978 RBM27Q9P2N5 1060 aaKnown RBP8.47□□□□□ -1.05
CTDSPL-208ENST00000486978 RIC1Q4ADV7 1423 aa8.46□□□□□ -1.05
CTDSPL-208ENST00000486978 SCN9AQ15858 1988 aa8.46□□□□□ -1.05
CTDSPL-208ENST00000486978 KDM3BQ7LBC6 1761 aa8.46□□□□□ -1.05
CTDSPL-208ENST00000486978 TAF7Q15545 349 aaPredicted RBP8.46□□□□□ -1.06
CTDSPL-208ENST00000486978 CHRDL2Q6WN34 429 aa8.46□□□□□ -1.06
CTDSPL-208ENST00000486978 PRKRIP1Q9H875 184 aaPredicted RBP8.46□□□□□ -1.06
CTDSPL-208ENST00000486978 DUOX1Q9NRD9 1551 aa8.46□□□□□ -1.06
CTDSPL-208ENST00000486978 SOX1O00570 391 aaPredicted RBP8.45□□□□□ -1.06
CTDSPL-208ENST00000486978 SNRPA1P09661 255 aaKnown RBP8.45□□□□□ -1.06
CTDSPL-208ENST00000486978 TM4SF4P48230 202 aa8.45□□□□□ -1.06
CTDSPL-208ENST00000486978 MKRN3Q13064 507 aaKnown RBP8.45□□□□□ -1.06
CTDSPL-208ENST00000486978 PNISRQ8TF01 805 aaKnown RBP8.45□□□□□ -1.06
CTDSPL-208ENST00000486978 CDCA5Q96FF9 252 aa8.45□□□□□ -1.06
CTDSPL-208ENST00000486978 CRAMP1Q96RY5 1269 aa8.45□□□□□ -1.06
CTDSPL-208ENST00000486978 RTFDC1Q9BY42 306 aaPredicted RBP8.45□□□□□ -1.06
CTDSPL-208ENST00000486978 UBN2Q6ZU65 1347 aa8.45□□□□□ -1.06
CTDSPL-208ENST00000486978 COL4A1P02462 1669 aa8.44□□□□□ -1.06
CTDSPL-208ENST00000486978 UBE2Q2LH0YL09 131 aa8.44□□□□□ -1.06
CTDSPL-208ENST00000486978 H7C1D1 291 aa8.44□□□□□ -1.06
CTDSPL-208ENST00000486978 PSMD14O00487 310 aa8.44□□□□□ -1.06
CTDSPL-208ENST00000486978 FKTNO75072 461 aa8.44□□□□□ -1.06
CTDSPL-208ENST00000486978 WDR43Q15061 677 aaKnown RBP eCLIP8.44□□□□□ -1.06
CTDSPL-208ENST00000486978 PRAMEF18Q5VWM3 479 aa8.44□□□□□ -1.06
CTDSPL-208ENST00000486978 OTOP1Q7RTM1 612 aa8.44□□□□□ -1.06
CTDSPL-208ENST00000486978 RPGRQ92834 1020 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms