RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 SP8Q8IXZ3 490 aa25.51■■□□□ 1.67
CHRD-216ENST00000486066 SUPT20HQ8NEM7 779 aa25.51■■□□□ 1.67
CHRD-216ENST00000486066 GRM1Q13255 1194 aa25.5■■□□□ 1.67
CHRD-216ENST00000486066 UTP14AQ9BVJ6 771 aaKnown RBP25.5■■□□□ 1.67
CHRD-216ENST00000486066 CCDC85CA6NKD9 419 aa25.49■■□□□ 1.67
CHRD-216ENST00000486066 BBOX1O75936 387 aa25.49■■□□□ 1.67
CHRD-216ENST00000486066 PROSER3Q2NL68 480 aa25.49■■□□□ 1.67
CHRD-216ENST00000486066 TRPM4Q8TD43 1214 aa25.49■■□□□ 1.67
CHRD-216ENST00000486066 DDX60Q8IY21 1712 aaKnown RBP25.49■■□□□ 1.67
CHRD-216ENST00000486066 YDJCA8MPS7 323 aa25.48■■□□□ 1.67
CHRD-216ENST00000486066 CIAPIN1Q6FI81 312 aa25.48■■□□□ 1.67
CHRD-216ENST00000486066 MCOLN1Q9GZU1 580 aa25.48■■□□□ 1.67
CHRD-216ENST00000486066 POLR2AP24928 1970 aaKnown RBP25.46■■□□□ 1.67
CHRD-216ENST00000486066 SHTN1A0MZ66 631 aa25.46■■□□□ 1.67
CHRD-216ENST00000486066 DPP8Q6V1X1 898 aaPredicted RBP25.46■■□□□ 1.67
CHRD-216ENST00000486066 NLRP10Q86W26 655 aa25.46■■□□□ 1.67
CHRD-216ENST00000486066 PDE4DIPQ5VU43 2346 aa25.45■■□□□ 1.66
CHRD-216ENST00000486066 MPNDQ8N594 471 aa25.45■■□□□ 1.66
CHRD-216ENST00000486066 ZIC5Q96T25 663 aa25.45■■□□□ 1.66
CHRD-216ENST00000486066 COL4A1P02462 1669 aa25.45■■□□□ 1.66
CHRD-216ENST00000486066 RAD17O75943 681 aa25.44■■□□□ 1.66
CHRD-216ENST00000486066 CDC37L1Q7L3B6 337 aa25.44■■□□□ 1.66
CHRD-216ENST00000486066 ANXA1P04083 346 aa25.43■■□□□ 1.66
CHRD-216ENST00000486066 GRAPQ13588 217 aa25.43■■□□□ 1.66
CHRD-216ENST00000486066 TNIP1Q15025 636 aa25.43■■□□□ 1.66
CHRD-216ENST00000486066 GRAPLQ8TC17 118 aaPredicted RBP25.43■■□□□ 1.66
CHRD-216ENST00000486066 TMX4Q9H1E5 349 aaPredicted RBP25.43■■□□□ 1.66
CHRD-216ENST00000486066 HCLS1P14317 486 aaPredicted RBP25.42■■□□□ 1.66
CHRD-216ENST00000486066 BABAM1Q9NWV8 329 aa25.42■■□□□ 1.66
CHRD-216ENST00000486066 CNOT7Q9UIV1 285 aaKnown RBP25.42■■□□□ 1.66
CHRD-216ENST00000486066 NEFMP07197 916 aa25.41■■□□□ 1.66
CHRD-216ENST00000486066 TSPYL4Q9UJ04 414 aa25.41■■□□□ 1.66
CHRD-216ENST00000486066 FAM155AB1AL88 458 aaPredicted RBP25.4■■□□□ 1.66
CHRD-216ENST00000486066 NOGQ13253 232 aa25.4■■□□□ 1.66
CHRD-216ENST00000486066 HSP90AB3PQ58FF7 597 aa25.4■■□□□ 1.66
CHRD-216ENST00000486066 DPF2Q92785 391 aa25.4■■□□□ 1.66
CHRD-216ENST00000486066 BCL2L13Q9BXK5 485 aa25.4■■□□□ 1.66
CHRD-216ENST00000486066 EIF2S2P20042 333 aaKnown RBP25.39■■□□□ 1.66
CHRD-216ENST00000486066 TCIRG1Q13488 830 aa25.39■■□□□ 1.66
CHRD-216ENST00000486066 DLK2Q6UY11 383 aa25.39■■□□□ 1.66
CHRD-216ENST00000486066 COPS6Q7L5N1 327 aa25.39■■□□□ 1.66
CHRD-216ENST00000486066 TMC4Q7Z404 712 aa25.39■■□□□ 1.66
CHRD-216ENST00000486066 MICALL2Q8IY33 904 aa25.39■■□□□ 1.66
CHRD-216ENST00000486066 SH3TC1Q8TE82 1336 aa25.38■■□□□ 1.65
CHRD-216ENST00000486066 SCN9AQ15858 1988 aa25.38■■□□□ 1.65
CHRD-216ENST00000486066 DDX46Q7L014 1031 aaKnown RBP25.38■■□□□ 1.65
CHRD-216ENST00000486066 EGFRP00533 1210 aa25.37■■□□□ 1.65
CHRD-216ENST00000486066 USP48Q86UV5 1035 aa25.37■■□□□ 1.65
CHRD-216ENST00000486066 XAGE3Q8WTP9 111 aa25.37■■□□□ 1.65
CHRD-216ENST00000486066 ZNF408Q9H9D4 720 aa25.37■■□□□ 1.65
CHRD-216ENST00000486066 ZBTB12Q9Y330 459 aaPredicted RBP25.37■■□□□ 1.65
CHRD-216ENST00000486066 HUNKP57058 714 aa25.36■■□□□ 1.65
CHRD-216ENST00000486066 PSMD14O00487 310 aa25.35■■□□□ 1.65
CHRD-216ENST00000486066 DGKZQ13574 1117 aa25.35■■□□□ 1.65
CHRD-216ENST00000486066 SAMD7Q7Z3H4 446 aa25.35■■□□□ 1.65
CHRD-216ENST00000486066 TRMT112Q9UI30 125 aaKnown RBP25.35■■□□□ 1.65
CHRD-216ENST00000486066 MAPK8IP3Q9UPT6 1336 aa25.35■■□□□ 1.65
CHRD-216ENST00000486066 RTL9Q8NET4 1388 aa25.34■■□□□ 1.65
CHRD-216ENST00000486066 H7C1D1 291 aa25.34■■□□□ 1.65
CHRD-216ENST00000486066 SF3B3Q15393 1217 aaKnown RBP25.33■■□□□ 1.65
CHRD-216ENST00000486066 PNNQ9H307 717 aaKnown RBP25.33■■□□□ 1.65
CHRD-216ENST00000486066 SAGE1Q9NXZ1 904 aa25.33■■□□□ 1.65
CHRD-216ENST00000486066 AKAP11Q9UKA4 1901 aa25.33■■□□□ 1.65
CHRD-216ENST00000486066 PSME4Q14997 1843 aa25.33■■□□□ 1.64
CHRD-216ENST00000486066 RGMBQ6NW40 437 aa25.32■■□□□ 1.64
CHRD-216ENST00000486066 CELF1Q92879 486 aaKnown RBP25.32■■□□□ 1.64
CHRD-216ENST00000486066 POLLQ9UGP5 575 aa25.32■■□□□ 1.64
CHRD-216ENST00000486066 ZNF609O15014 1411 aa25.31■■□□□ 1.64
CHRD-216ENST00000486066 RIPK4P57078 832 aa25.31■■□□□ 1.64
CHRD-216ENST00000486066 AIMP1Q12904 312 aaKnown RBP25.31■■□□□ 1.64
CHRD-216ENST00000486066 WASHC4Q2M389 1173 aa25.31■■□□□ 1.64
CHRD-216ENST00000486066 ISCA1Q9BUE6 129 aa25.31■■□□□ 1.64
CHRD-216ENST00000486066 KCNQ5Q9NR82 932 aa25.31■■□□□ 1.64
CHRD-216ENST00000486066 RPS12P25398 132 aaKnown RBP25.3■■□□□ 1.64
CHRD-216ENST00000486066 KRT26Q7Z3Y9 468 aa25.3■■□□□ 1.64
CHRD-216ENST00000486066 DBNDD1Q9H9R9 158 aa25.3■■□□□ 1.64
CHRD-216ENST00000486066 GBA2Q9HCG7 927 aaPredicted RBP25.3■■□□□ 1.64
CHRD-216ENST00000486066 PCDH10Q9P2E7 1040 aa25.3■■□□□ 1.64
CHRD-216ENST00000486066 TMPOP42166 694 aaKnown RBP25.29■■□□□ 1.64
CHRD-216ENST00000486066 KRT24Q2M2I5 525 aa25.29■■□□□ 1.64
CHRD-216ENST00000486066 TBC1D10BQ4KMP7 808 aaPredicted RBP25.29■■□□□ 1.64
CHRD-216ENST00000486066 ADM5C9JUS6 153 aa25.28■■□□□ 1.64
CHRD-216ENST00000486066 CHL1O00533 1208 aa25.28■■□□□ 1.64
CHRD-216ENST00000486066 NECTIN2Q92692 538 aa25.28■■□□□ 1.64
CHRD-216ENST00000486066 GPSM2P81274 684 aa25.27■■□□□ 1.64
CHRD-216ENST00000486066 KIF23Q02241 960 aaPredicted RBP25.27■■□□□ 1.64
CHRD-216ENST00000486066 CCDC102AQ96A19 550 aa25.27■■□□□ 1.64
CHRD-216ENST00000486066 NSFL1CQ9UNZ2 370 aaKnown RBP25.27■■□□□ 1.64
CHRD-216ENST00000486066 ECE2O60344 883 aa25.26■■□□□ 1.63
CHRD-216ENST00000486066 PLBD2Q8NHP8 589 aa25.26■■□□□ 1.63
CHRD-216ENST00000486066 FAM89AQ96GI7 184 aa25.26■■□□□ 1.63
CHRD-216ENST00000486066 CHPF2Q9P2E5 772 aa25.26■■□□□ 1.63
CHRD-216ENST00000486066 SLC10A3P09131 477 aa25.25■■□□□ 1.63
CHRD-216ENST00000486066 VIL1P09327 827 aaKnown RBP25.25■■□□□ 1.63
CHRD-216ENST00000486066 TBC1D16Q8TBP0 767 aa25.25■■□□□ 1.63
CHRD-216ENST00000486066 RNF186Q9NXI6 227 aa25.25■■□□□ 1.63
CHRD-216ENST00000486066 TRIM28Q13263 835 aaKnown RBP25.24■■□□□ 1.63
CHRD-216ENST00000486066 C2orf69Q8N8R5 385 aa25.24■■□□□ 1.63
CHRD-216ENST00000486066 CFAP44Q96MT7 982 aa25.24■■□□□ 1.63
CHRD-216ENST00000486066 PODXL2Q9NZ53 605 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms