RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 SORBS3O60504 671 aa8.45□□□□□ -1.06
SRRM1-213ENST00000485441 PSMD2Q13200 908 aa8.45□□□□□ -1.06
SRRM1-213ENST00000485441 TSNAXIP1Q2TAA8 658 aa8.45□□□□□ -1.06
SRRM1-213ENST00000485441 TRIM47Q96LD4 638 aa8.45□□□□□ -1.06
SRRM1-213ENST00000485441 PHACTR2O75167 634 aa8.44□□□□□ -1.06
SRRM1-213ENST00000485441 CTSHP09668 335 aa8.44□□□□□ -1.06
SRRM1-213ENST00000485441 MAPTP10636 758 aaKnown RBP8.44□□□□□ -1.06
SRRM1-213ENST00000485441 LAMC2Q13753 1193 aa8.44□□□□□ -1.06
SRRM1-213ENST00000485441 GRIN2CQ14957 1233 aa8.44□□□□□ -1.06
SRRM1-213ENST00000485441 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.44□□□□□ -1.06
SRRM1-213ENST00000485441 PI16Q6UXB8 463 aa8.44□□□□□ -1.06
SRRM1-213ENST00000485441 RIPOR1Q6ZS17 1223 aa8.44□□□□□ -1.06
SRRM1-213ENST00000485441 EPS8L3Q8TE67 593 aaKnown RBP8.44□□□□□ -1.06
SRRM1-213ENST00000485441 KIFC2Q96AC6 838 aa8.44□□□□□ -1.06
SRRM1-213ENST00000485441 NUCKS1Q9H1E3 243 aaKnown RBP8.44□□□□□ -1.06
SRRM1-213ENST00000485441 SENP2Q9HC62 589 aa8.44□□□□□ -1.06
SRRM1-213ENST00000485441 ABI2Q9NYB9 513 aaPredicted RBP8.44□□□□□ -1.06
SRRM1-213ENST00000485441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.44□□□□□ -1.06
SRRM1-213ENST00000485441 H7C1W4 665 aa8.43□□□□□ -1.06
SRRM1-213ENST00000485441 EREGO14944 169 aa8.43□□□□□ -1.06
SRRM1-213ENST00000485441 SASH3O75995 380 aa8.43□□□□□ -1.06
SRRM1-213ENST00000485441 TARSP26639 723 aaKnown RBP8.43□□□□□ -1.06
SRRM1-213ENST00000485441 IRS1P35568 1242 aa8.43□□□□□ -1.06
SRRM1-213ENST00000485441 CCINQ13939 588 aa8.43□□□□□ -1.06
SRRM1-213ENST00000485441 GALNT12Q8IXK2 581 aa8.43□□□□□ -1.06
SRRM1-213ENST00000485441 GMCL1Q96IK5 515 aa8.43□□□□□ -1.06
SRRM1-213ENST00000485441 OSBPL7Q9BZF2 842 aa8.43□□□□□ -1.06
SRRM1-213ENST00000485441 ZFATQ9P243 1243 aa8.43□□□□□ -1.06
SRRM1-213ENST00000485441 GMPR2Q9P2T1 348 aaKnown RBP8.43□□□□□ -1.06
SRRM1-213ENST00000485441 LCE2BO14633 110 aa8.42□□□□□ -1.06
SRRM1-213ENST00000485441 SCAMP3O14828 347 aaKnown RBP8.42□□□□□ -1.06
SRRM1-213ENST00000485441 KHNYNO15037 678 aaKnown RBP8.42□□□□□ -1.06
SRRM1-213ENST00000485441 POLR3DP05423 398 aaPredicted RBP8.42□□□□□ -1.06
SRRM1-213ENST00000485441 VEGFBP49765 207 aa8.42□□□□□ -1.06
SRRM1-213ENST00000485441 ZNF837Q96EG3 531 aaPredicted RBP8.42□□□□□ -1.06
SRRM1-213ENST00000485441 GIPC1O14908 333 aa8.41□□□□□ -1.06
SRRM1-213ENST00000485441 MMP20O60882 483 aa8.41□□□□□ -1.06
SRRM1-213ENST00000485441 CYP2E1P05181 493 aaPredicted RBP8.41□□□□□ -1.06
SRRM1-213ENST00000485441 ITGA6P23229 1130 aa8.41□□□□□ -1.06
SRRM1-213ENST00000485441 HDLBPQ00341 1268 aaKnown RBP8.41□□□□□ -1.06
SRRM1-213ENST00000485441 METTL16Q86W50 562 aaKnown RBP8.41□□□□□ -1.06
SRRM1-213ENST00000485441 OR13H1Q8NG92 308 aa8.41□□□□□ -1.06
SRRM1-213ENST00000485441 PMEPA1Q969W9 287 aa8.41□□□□□ -1.06
SRRM1-213ENST00000485441 BCL11AQ9H165 835 aa8.41□□□□□ -1.06
SRRM1-213ENST00000485441 DCDC2BA2VCK2 349 aa8.4□□□□□ -1.06
SRRM1-213ENST00000485441 SNRPBP14678 240 aaKnown RBP8.4□□□□□ -1.06
SRRM1-213ENST00000485441 TMEM87AQ8NBN3 555 aa8.4□□□□□ -1.06
SRRM1-213ENST00000485441 SLC30A3Q99726 388 aa8.4□□□□□ -1.06
SRRM1-213ENST00000485441 MRS2Q9HD23 443 aa8.4□□□□□ -1.06
SRRM1-213ENST00000485441 MARK1Q9P0L2 795 aa8.4□□□□□ -1.06
SRRM1-213ENST00000485441 SALL4Q9UJQ4 1053 aa8.4□□□□□ -1.06
SRRM1-213ENST00000485441 SPG7Q9UQ90 795 aa8.4□□□□□ -1.06
SRRM1-213ENST00000485441 ITGAEP38570 1179 aa8.39□□□□□ -1.07
SRRM1-213ENST00000485441 FANCCQ00597 558 aa8.39□□□□□ -1.07
SRRM1-213ENST00000485441 TTC39BQ5VTQ0 682 aaPredicted RBP8.39□□□□□ -1.07
SRRM1-213ENST00000485441 KIAA0319Q5VV43 1072 aa8.39□□□□□ -1.07
SRRM1-213ENST00000485441 PEAR1Q5VY43 1037 aaPredicted RBP8.39□□□□□ -1.07
SRRM1-213ENST00000485441 ABHD17AQ96GS6 310 aa8.39□□□□□ -1.07
SRRM1-213ENST00000485441 IRX2Q9BZI1 471 aaPredicted RBP8.39□□□□□ -1.07
SRRM1-213ENST00000485441 C12orf49Q9H741 205 aa8.39□□□□□ -1.07
SRRM1-213ENST00000485441 EFCC1Q9HA90 598 aa8.39□□□□□ -1.07
SRRM1-213ENST00000485441 NPHS2Q9NP85 383 aa8.39□□□□□ -1.07
SRRM1-213ENST00000485441 VTI1BQ9UEU0 232 aa8.39□□□□□ -1.07
SRRM1-213ENST00000485441 POTECB2RU33 542 aa8.38□□□□□ -1.07
SRRM1-213ENST00000485441 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
SRRM1-213ENST00000485441 HOXD8P13378 290 aaPredicted RBP8.38□□□□□ -1.07
SRRM1-213ENST00000485441 CES1P23141 567 aa8.38□□□□□ -1.07
SRRM1-213ENST00000485441 RAD51AP2Q09MP3 1159 aa8.38□□□□□ -1.07
SRRM1-213ENST00000485441 FAM182BQ5T319 152 aa8.38□□□□□ -1.07
SRRM1-213ENST00000485441 METTL5Q9NRN9 209 aaKnown RBP8.38□□□□□ -1.07
SRRM1-213ENST00000485441 TLR7Q9NYK1 1049 aaKnown RBP8.38□□□□□ -1.07
SRRM1-213ENST00000485441 USP31Q70CQ4 1352 aa8.37□□□□□ -1.07
SRRM1-213ENST00000485441 IGSF3O75054 1194 aa8.37□□□□□ -1.07
SRRM1-213ENST00000485441 PPFIA3O75145 1194 aa8.37□□□□□ -1.07
SRRM1-213ENST00000485441 EIF4BP23588 611 aaKnown RBP8.37□□□□□ -1.07
SRRM1-213ENST00000485441 SPEM2Q0P670 501 aa8.37□□□□□ -1.07
SRRM1-213ENST00000485441 KRT25Q7Z3Z0 450 aa8.37□□□□□ -1.07
SRRM1-213ENST00000485441 GLIS3Q8NEA6 775 aa8.37□□□□□ -1.07
SRRM1-213ENST00000485441 GTPBP3Q969Y2 492 aaKnown RBP8.37□□□□□ -1.07
SRRM1-213ENST00000485441 SUV39H2Q9H5I1 410 aa8.37□□□□□ -1.07
SRRM1-213ENST00000485441 NLRP2Q9NX02 1062 aa8.37□□□□□ -1.07
SRRM1-213ENST00000485441 ATXN7L1Q9ULK2 861 aaPredicted RBP8.37□□□□□ -1.07
SRRM1-213ENST00000485441 A0A1W2PP55 124 aa8.36□□□□□ -1.07
SRRM1-213ENST00000485441 KIF4AO95239 1232 aa8.36□□□□□ -1.07
SRRM1-213ENST00000485441 SOX18P35713 384 aa8.36□□□□□ -1.07
SRRM1-213ENST00000485441 COL13A1Q5TAT6 717 aaPredicted RBP8.36□□□□□ -1.07
SRRM1-213ENST00000485441 C9orf131Q5VYM1 1079 aa8.36□□□□□ -1.07
SRRM1-213ENST00000485441 NXPE4Q6UWF7 544 aa8.36□□□□□ -1.07
SRRM1-213ENST00000485441 NANOS1Q8WY41 292 aaKnown RBP8.36□□□□□ -1.07
SRRM1-213ENST00000485441 CRELD1Q96HD1 420 aa8.36□□□□□ -1.07
SRRM1-213ENST00000485441 BCO2Q9BYV7 579 aa8.36□□□□□ -1.07
SRRM1-213ENST00000485441 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.36□□□□□ -1.07
SRRM1-213ENST00000485441 RARAP10276 462 aa8.35□□□□□ -1.07
SRRM1-213ENST00000485441 CD33P20138 364 aa8.35□□□□□ -1.07
SRRM1-213ENST00000485441 CTBSQ01459 385 aa8.35□□□□□ -1.07
SRRM1-213ENST00000485441 GRM2Q14416 872 aa8.35□□□□□ -1.07
SRRM1-213ENST00000485441 C8orf37Q96NL8 207 aa8.35□□□□□ -1.07
SRRM1-213ENST00000485441 SRCIN1Q9C0H9 1055 aa8.35□□□□□ -1.07
SRRM1-213ENST00000485441 LATS2Q9NRM7 1088 aa8.35□□□□□ -1.07
SRRM1-213ENST00000485441 KANSL3Q9P2N6 904 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms