RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 WNK3Q9BYP7 1800 aa7.87□□□□□ -1.15
PTPN4-210ENST00000485247 NHSQ6T4R5 1651 aa7.87□□□□□ -1.15
PTPN4-210ENST00000485247 AXIN1O15169 862 aa7.87□□□□□ -1.15
PTPN4-210ENST00000485247 C4orf48Q5BLP8 95 aa7.87□□□□□ -1.15
PTPN4-210ENST00000485247 CD2APQ9Y5K6 639 aa7.87□□□□□ -1.15
PTPN4-210ENST00000485247 TNS2Q63HR2 1409 aa7.86□□□□□ -1.15
PTPN4-210ENST00000485247 SLC27A3Q5K4L6 730 aa7.86□□□□□ -1.15
PTPN4-210ENST00000485247 LRRN4Q8WUT4 740 aa7.86□□□□□ -1.15
PTPN4-210ENST00000485247 MPHOSPH9Q99550 1183 aa7.86□□□□□ -1.15
PTPN4-210ENST00000485247 BTAF1O14981 1849 aa7.86□□□□□ -1.15
PTPN4-210ENST00000485247 WDR90Q96KV7 1748 aa7.86□□□□□ -1.15
PTPN4-210ENST00000485247 VARSP26640 1264 aaKnown RBP7.85□□□□□ -1.15
PTPN4-210ENST00000485247 COL23A1Q86Y22 540 aaPredicted RBP7.85□□□□□ -1.15
PTPN4-210ENST00000485247 NMRK2Q9NPI5 230 aa7.85□□□□□ -1.15
PTPN4-210ENST00000485247 QSER1Q2KHR3 1735 aa7.85□□□□□ -1.15
PTPN4-210ENST00000485247 COL18A1P39060 1754 aa7.84□□□□□ -1.15
PTPN4-210ENST00000485247 KAT6BQ8WYB5 2073 aa7.84□□□□□ -1.15
PTPN4-210ENST00000485247 IL27Q8NEV9 243 aa7.84□□□□□ -1.15
PTPN4-210ENST00000485247 TUBGCP6Q96RT7 1819 aa7.84□□□□□ -1.15
PTPN4-210ENST00000485247 PPIP5K1Q6PFW1 1433 aa7.84□□□□□ -1.15
PTPN4-210ENST00000485247 CCDC7Q96M83 1385 aa7.84□□□□□ -1.16
PTPN4-210ENST00000485247 IGSF1Q8N6C5 1336 aa7.83□□□□□ -1.16
PTPN4-210ENST00000485247 HSPA1AP0DMV8 641 aaKnown RBP7.83□□□□□ -1.16
PTPN4-210ENST00000485247 HSPA1BP0DMV9 641 aaKnown RBP7.83□□□□□ -1.16
PTPN4-210ENST00000485247 ARHGEF25Q86VW2 580 aa7.83□□□□□ -1.16
PTPN4-210ENST00000485247 C16orf71Q8IYS4 520 aaPredicted RBP7.83□□□□□ -1.16
PTPN4-210ENST00000485247 SYTL4Q96C24 671 aaPredicted RBP7.83□□□□□ -1.16
PTPN4-210ENST00000485247 GMPR2Q9P2T1 348 aaKnown RBP7.83□□□□□ -1.16
PTPN4-210ENST00000485247 CPSF1Q10570 1443 aaKnown RBP7.83□□□□□ -1.16
PTPN4-210ENST00000485247 ARHGEF28Q8N1W1 1705 aaKnown RBP7.83□□□□□ -1.16
PTPN4-210ENST00000485247 IL2RBP14784 551 aa7.82□□□□□ -1.16
PTPN4-210ENST00000485247 SRPK2P78362 688 aaKnown RBP7.82□□□□□ -1.16
PTPN4-210ENST00000485247 SH3BP5LQ7L8J4 393 aa7.82□□□□□ -1.16
PTPN4-210ENST00000485247 SH3RF1Q7Z6J0 888 aa7.82□□□□□ -1.16
PTPN4-210ENST00000485247 MPNDQ8N594 471 aa7.82□□□□□ -1.16
PTPN4-210ENST00000485247 GOPCQ9HD26 462 aa7.82□□□□□ -1.16
PTPN4-210ENST00000485247 NLRP2Q9NX02 1062 aa7.82□□□□□ -1.16
PTPN4-210ENST00000485247 CCNL1Q9UK58 526 aaPredicted RBP7.82□□□□□ -1.16
PTPN4-210ENST00000485247 WASF2Q9Y6W5 498 aa7.82□□□□□ -1.16
PTPN4-210ENST00000485247 SLIT3O75094 1523 aa7.82□□□□□ -1.16
PTPN4-210ENST00000485247 ABCC6O95255 1503 aa7.82□□□□□ -1.16
PTPN4-210ENST00000485247 RGPD5Q99666 1765 aa7.82□□□□□ -1.16
PTPN4-210ENST00000485247 AP1G2O75843 785 aa7.81□□□□□ -1.16
PTPN4-210ENST00000485247 RFC5P40937 340 aa7.81□□□□□ -1.16
PTPN4-210ENST00000485247 DDX54Q8TDD1 881 aaKnown RBP7.81□□□□□ -1.16
PTPN4-210ENST00000485247 HMX1Q9NP08 348 aaPredicted RBP7.81□□□□□ -1.16
PTPN4-210ENST00000485247 ATP13A2Q9NQ11 1180 aa7.81□□□□□ -1.16
PTPN4-210ENST00000485247 TRPM1Q7Z4N2 1603 aa7.81□□□□□ -1.16
PTPN4-210ENST00000485247 FSTL1Q12841 308 aa7.8□□□□□ -1.16
PTPN4-210ENST00000485247 NR6A1Q15406 480 aa7.8□□□□□ -1.16
PTPN4-210ENST00000485247 BPHLQ86WA6 291 aaPredicted RBP7.8□□□□□ -1.16
PTPN4-210ENST00000485247 KCNH5Q8NCM2 988 aa7.8□□□□□ -1.16
PTPN4-210ENST00000485247 ARMC2Q8NEN0 867 aa7.8□□□□□ -1.16
PTPN4-210ENST00000485247 FAM174AQ8TBP5 190 aa7.8□□□□□ -1.16
PTPN4-210ENST00000485247 EPS8L1Q8TE68 723 aa7.8□□□□□ -1.16
PTPN4-210ENST00000485247 DCAF11Q8TEB1 546 aa7.8□□□□□ -1.16
PTPN4-210ENST00000485247 ZNF775Q96BV0 537 aaPredicted RBP7.8□□□□□ -1.16
PTPN4-210ENST00000485247 CDK15Q96Q40 435 aa7.8□□□□□ -1.16
PTPN4-210ENST00000485247 C1QTNF2Q9BXJ5 285 aa7.8□□□□□ -1.16
PTPN4-210ENST00000485247 USP17L8P0C7I0 530 aa7.79□□□□□ -1.16
PTPN4-210ENST00000485247 NNTQ13423 1086 aa7.79□□□□□ -1.16
PTPN4-210ENST00000485247 AGERQ15109 404 aa7.79□□□□□ -1.16
PTPN4-210ENST00000485247 CABP1Q9NZU7 370 aa7.79□□□□□ -1.16
PTPN4-210ENST00000485247 ADH1CP00326 375 aa7.78□□□□□ -1.16
PTPN4-210ENST00000485247 PCMTD1Q96MG8 357 aaPredicted RBP7.78□□□□□ -1.16
PTPN4-210ENST00000485247 PIK3C2AO00443 1686 aa7.77□□□□□ -1.17
PTPN4-210ENST00000485247 NR3C2P08235 984 aa7.77□□□□□ -1.17
PTPN4-210ENST00000485247 BMP1P13497 986 aa7.77□□□□□ -1.17
PTPN4-210ENST00000485247 ARHGAP27Q6ZUM4 889 aa7.77□□□□□ -1.17
PTPN4-210ENST00000485247 SMIM5Q71RC9 77 aa7.77□□□□□ -1.17
PTPN4-210ENST00000485247 FKBPLQ9UIM3 349 aa7.77□□□□□ -1.17
PTPN4-210ENST00000485247 BCS1LQ9Y276 419 aa7.77□□□□□ -1.17
PTPN4-210ENST00000485247 ANKRD36BQ8N2N9 1353 aa7.76□□□□□ -1.17
PTPN4-210ENST00000485247 MAGEB6P1A0A0J9YX57 407 aa7.76□□□□□ -1.17
PTPN4-210ENST00000485247 CAPN5O15484 640 aaPredicted RBP7.76□□□□□ -1.17
PTPN4-210ENST00000485247 GRM5P41594 1212 aa7.76□□□□□ -1.17
PTPN4-210ENST00000485247 ARID5BQ14865 1188 aa7.76□□□□□ -1.17
PTPN4-210ENST00000485247 TRIM46Q7Z4K8 759 aa7.76□□□□□ -1.17
PTPN4-210ENST00000485247 FLAD1Q8NFF5 587 aa7.76□□□□□ -1.17
PTPN4-210ENST00000485247 GPKOWQ92917 476 aaPredicted RBP eCLIP7.76□□□□□ -1.17
PTPN4-210ENST00000485247 OCSTAMPQ9BR26 566 aa7.76□□□□□ -1.17
PTPN4-210ENST00000485247 KLF16Q9BXK1 252 aaPredicted RBP7.76□□□□□ -1.17
PTPN4-210ENST00000485247 CARD14Q9BXL6 1004 aa7.76□□□□□ -1.17
PTPN4-210ENST00000485247 RRAGCQ9HB90 399 aa7.76□□□□□ -1.17
PTPN4-210ENST00000485247 PCNTO95613 3336 aa7.76□□□□□ -1.17
PTPN4-210ENST00000485247 LY75O60449 1722 aa7.75□□□□□ -1.17
PTPN4-210ENST00000485247 NSD2O96028 1365 aa7.75□□□□□ -1.17
PTPN4-210ENST00000485247 USP47Q96K76 1375 aa7.75□□□□□ -1.17
PTPN4-210ENST00000485247 CICQ96RK0 1608 aaPredicted RBP7.75□□□□□ -1.17
PTPN4-210ENST00000485247 PRKCSHP14314 528 aaPredicted RBP7.75□□□□□ -1.17
PTPN4-210ENST00000485247 SNRPBP14678 240 aaKnown RBP7.75□□□□□ -1.17
PTPN4-210ENST00000485247 TIMP2P16035 220 aa7.75□□□□□ -1.17
PTPN4-210ENST00000485247 ERFEQ4G0M1 354 aa7.75□□□□□ -1.17
PTPN4-210ENST00000485247 C9orf131Q5VYM1 1079 aa7.75□□□□□ -1.17
PTPN4-210ENST00000485247 TRMT44Q8IYL2 757 aaKnown RBP7.75□□□□□ -1.17
PTPN4-210ENST00000485247 SMC1BQ8NDV3 1235 aa7.75□□□□□ -1.17
PTPN4-210ENST00000485247 ANKRD24Q8TF21 1146 aa7.75□□□□□ -1.17
PTPN4-210ENST00000485247 TTC21BQ7Z4L5 1316 aa7.75□□□□□ -1.17
PTPN4-210ENST00000485247 KCPQ6ZWJ8 1503 aa7.74□□□□□ -1.17
PTPN4-210ENST00000485247 PDXDC2PQ6P474 469 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms