RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 NIM1KQ8IY84 436 aa23.41■■□□□ 1.34
ATG4B-221ENST00000483778 IFT57Q9NWB7 429 aa23.41■■□□□ 1.34
ATG4B-221ENST00000483778 CXCL9Q07325 125 aa23.4■■□□□ 1.34
ATG4B-221ENST00000483778 GRAPQ13588 217 aa23.4■■□□□ 1.34
ATG4B-221ENST00000483778 PNMA8AQ86V59 439 aaPredicted RBP23.4■■□□□ 1.34
ATG4B-221ENST00000483778 MPNDQ8N594 471 aa23.4■■□□□ 1.34
ATG4B-221ENST00000483778 GRAPLQ8TC17 118 aaPredicted RBP23.4■■□□□ 1.34
ATG4B-221ENST00000483778 DPP8Q6V1X1 898 aaPredicted RBP23.39■■□□□ 1.33
ATG4B-221ENST00000483778 TSPYL6Q8N831 410 aa23.39■■□□□ 1.33
ATG4B-221ENST00000483778 CELF1Q92879 486 aaKnown RBP23.39■■□□□ 1.33
ATG4B-221ENST00000483778 TMEM88BA6NKF7 163 aa23.38■■□□□ 1.33
ATG4B-221ENST00000483778 GNAI1P63096 354 aa23.38■■□□□ 1.33
ATG4B-221ENST00000483778 JARID2Q92833 1246 aaPredicted RBP23.38■■□□□ 1.33
ATG4B-221ENST00000483778 DUOX1Q9NRD9 1551 aa23.38■■□□□ 1.33
ATG4B-221ENST00000483778 LRRC37AA6NMS7 1700 aa23.38■■□□□ 1.33
ATG4B-221ENST00000483778 TRIM28Q13263 835 aaKnown RBP23.37■■□□□ 1.33
ATG4B-221ENST00000483778 SF3B3Q15393 1217 aaKnown RBP23.37■■□□□ 1.33
ATG4B-221ENST00000483778 TMX4Q9H1E5 349 aaPredicted RBP23.37■■□□□ 1.33
ATG4B-221ENST00000483778 ZNRF3Q9ULT6 936 aa23.37■■□□□ 1.33
ATG4B-221ENST00000483778 CNTNAP1P78357 1384 aa23.37■■□□□ 1.33
ATG4B-221ENST00000483778 VEGFBP49765 207 aa23.36■■□□□ 1.33
ATG4B-221ENST00000483778 RIC3Q7Z5B4 369 aa23.36■■□□□ 1.33
ATG4B-221ENST00000483778 VPS33BQ9H267 617 aa23.36■■□□□ 1.33
ATG4B-221ENST00000483778 TRPM7Q96QT4 1865 aa23.35■■□□□ 1.33
ATG4B-221ENST00000483778 YDJCA8MPS7 323 aa23.35■■□□□ 1.33
ATG4B-221ENST00000483778 RAD17O75943 681 aa23.35■■□□□ 1.33
ATG4B-221ENST00000483778 LMOD1P29536 600 aaPredicted RBP23.35■■□□□ 1.33
ATG4B-221ENST00000483778 KIAA2012Q0VF49 1180 aa23.35■■□□□ 1.33
ATG4B-221ENST00000483778 SUPT20HQ8NEM7 779 aa23.35■■□□□ 1.33
ATG4B-221ENST00000483778 GPRC5DQ9NZD1 345 aa23.35■■□□□ 1.33
ATG4B-221ENST00000483778 IRS4O14654 1257 aaPredicted RBP23.34■■□□□ 1.33
ATG4B-221ENST00000483778 GMPSP49915 693 aaPredicted RBP23.34■■□□□ 1.33
ATG4B-221ENST00000483778 TSR2Q969E8 191 aaKnown RBP23.34■■□□□ 1.33
ATG4B-221ENST00000483778 MYD88Q99836 296 aa23.34■■□□□ 1.33
ATG4B-221ENST00000483778 POLR2AP24928 1970 aaKnown RBP23.34■■□□□ 1.33
ATG4B-221ENST00000483778 SHTN1A0MZ66 631 aa23.33■■□□□ 1.33
ATG4B-221ENST00000483778 TRAF5O00463 557 aa23.33■■□□□ 1.33
ATG4B-221ENST00000483778 GPSM2P81274 684 aa23.32■■□□□ 1.32
ATG4B-221ENST00000483778 CALD1Q05682 793 aaKnown RBP23.32■■□□□ 1.32
ATG4B-221ENST00000483778 GPR101Q96P66 508 aaPredicted RBP23.32■■□□□ 1.32
ATG4B-221ENST00000483778 SEC31BQ9NQW1 1179 aa23.32■■□□□ 1.32
ATG4B-221ENST00000483778 POLLQ9UGP5 575 aa23.32■■□□□ 1.32
ATG4B-221ENST00000483778 GOLGA2Q08379 1002 aa23.31■■□□□ 1.32
ATG4B-221ENST00000483778 CIAPIN1Q6FI81 312 aa23.31■■□□□ 1.32
ATG4B-221ENST00000483778 USP50Q70EL3 339 aaPredicted RBP23.31■■□□□ 1.32
ATG4B-221ENST00000483778 ZBTB38Q8NAP3 1195 aaPredicted RBP23.31■■□□□ 1.32
ATG4B-221ENST00000483778 KCNQ5Q9NR82 932 aa23.31■■□□□ 1.32
ATG4B-221ENST00000483778 NSFL1CQ9UNZ2 370 aaKnown RBP23.31■■□□□ 1.32
ATG4B-221ENST00000483778 RIMBP2O15034 1052 aa23.3■■□□□ 1.32
ATG4B-221ENST00000483778 HIRAP54198 1017 aaPredicted RBP23.3■■□□□ 1.32
ATG4B-221ENST00000483778 CST9Q5W186 159 aa23.3■■□□□ 1.32
ATG4B-221ENST00000483778 FOXN1O15353 648 aa23.29■■□□□ 1.32
ATG4B-221ENST00000483778 RPS8P62241 208 aaKnown RBP23.29■■□□□ 1.32
ATG4B-221ENST00000483778 TMC4Q7Z404 712 aa23.29■■□□□ 1.32
ATG4B-221ENST00000483778 ADARB2Q9NS39 739 aaKnown RBP23.29■■□□□ 1.32
ATG4B-221ENST00000483778 SCN9AQ15858 1988 aa23.29■■□□□ 1.32
ATG4B-221ENST00000483778 DEFB115Q30KQ5 88 aa23.28■■□□□ 1.32
ATG4B-221ENST00000483778 CCDC30Q5VVM6 783 aa23.28■■□□□ 1.32
ATG4B-221ENST00000483778 WWC1Q8IX03 1113 aa23.28■■□□□ 1.32
ATG4B-221ENST00000483778 METTL22Q9BUU2 404 aaPredicted RBP23.28■■□□□ 1.32
ATG4B-221ENST00000483778 DBNDD1Q9H9R9 158 aa23.28■■□□□ 1.32
ATG4B-221ENST00000483778 ZBTB12Q9Y330 459 aaPredicted RBP23.28■■□□□ 1.32
ATG4B-221ENST00000483778 RASSF10A6NK89 507 aa23.27■■□□□ 1.32
ATG4B-221ENST00000483778 C6orf229H3BNL8 230 aa23.27■■□□□ 1.32
ATG4B-221ENST00000483778 WASHC4Q2M389 1173 aa23.27■■□□□ 1.32
ATG4B-221ENST00000483778 G2E3Q7L622 706 aa23.27■■□□□ 1.32
ATG4B-221ENST00000483778 TNS4Q8IZW8 715 aa23.27■■□□□ 1.32
ATG4B-221ENST00000483778 CCDC85AQ96PX6 553 aaPredicted RBP23.27■■□□□ 1.32
ATG4B-221ENST00000483778 MAP3K2Q9Y2U5 619 aa23.27■■□□□ 1.32
ATG4B-221ENST00000483778 PCCAP05165 728 aaPredicted RBP23.26■■□□□ 1.31
ATG4B-221ENST00000483778 TNIP1Q15025 636 aa23.26■■□□□ 1.31
ATG4B-221ENST00000483778 DOK7Q18PE1 504 aa23.26■■□□□ 1.31
ATG4B-221ENST00000483778 CCDC191Q8NCU4 936 aa23.26■■□□□ 1.31
ATG4B-221ENST00000483778 TRPM4Q8TD43 1214 aa23.26■■□□□ 1.31
ATG4B-221ENST00000483778 BCL2L13Q9BXK5 485 aa23.26■■□□□ 1.31
ATG4B-221ENST00000483778 CNOT7Q9UIV1 285 aaKnown RBP23.26■■□□□ 1.31
ATG4B-221ENST00000483778 IGKV5-2P06315 115 aa23.25■■□□□ 1.31
ATG4B-221ENST00000483778 ABT1Q9ULW3 272 aaKnown RBP23.25■■□□□ 1.31
ATG4B-221ENST00000483778 PI4KAP2A4QPH2 592 aa23.24■■□□□ 1.31
ATG4B-221ENST00000483778 PSMD14O00487 310 aa23.24■■□□□ 1.31
ATG4B-221ENST00000483778 CAPN15O75808 1086 aa23.24■■□□□ 1.31
ATG4B-221ENST00000483778 DLK2Q6UY11 383 aa23.24■■□□□ 1.31
ATG4B-221ENST00000483778 PI4KAP1Q8N8J0 262 aa23.24■■□□□ 1.31
ATG4B-221ENST00000483778 TBC1D16Q8TBP0 767 aa23.24■■□□□ 1.31
ATG4B-221ENST00000483778 GLIS2Q9BZE0 524 aaPredicted RBP23.24■■□□□ 1.31
ATG4B-221ENST00000483778 CWC25Q9NXE8 425 aaPredicted RBP23.24■■□□□ 1.31
ATG4B-221ENST00000483778 PGAP2Q9UHJ9 254 aa23.24■■□□□ 1.31
ATG4B-221ENST00000483778 WTIPA6NIX2 430 aaPredicted RBP23.23■■□□□ 1.31
ATG4B-221ENST00000483778 CCDC27Q2M243 656 aa23.23■■□□□ 1.31
ATG4B-221ENST00000483778 KSR2Q6VAB6 950 aa23.23■■□□□ 1.31
ATG4B-221ENST00000483778 SPEF2Q9C093 1822 aa23.23■■□□□ 1.31
ATG4B-221ENST00000483778 MYH3P11055 1940 aa23.23■■□□□ 1.31
ATG4B-221ENST00000483778 PDE8AO60658 829 aa23.22■■□□□ 1.31
ATG4B-221ENST00000483778 EGFRP00533 1210 aa23.22■■□□□ 1.31
ATG4B-221ENST00000483778 WBP1LQ9NX94 342 aa23.22■■□□□ 1.31
ATG4B-221ENST00000483778 SALL2Q9Y467 1007 aaPredicted RBP23.22■■□□□ 1.31
ATG4B-221ENST00000483778 WDR33Q9C0J8 1336 aaKnown RBP23.22■■□□□ 1.31
ATG4B-221ENST00000483778 RTL9Q8NET4 1388 aa23.22■■□□□ 1.31
ATG4B-221ENST00000483778 ECE2O60344 883 aa23.21■■□□□ 1.31
ATG4B-221ENST00000483778 DDX58O95786 925 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms