RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 A6NHS1 94 aa7.77□□□□□ -1.17
COPA-203ENST00000481040 RPLP1P05386 114 aaKnown RBP7.77□□□□□ -1.17
COPA-203ENST00000481040 CLN3Q13286 438 aa7.77□□□□□ -1.17
COPA-203ENST00000481040 SDE2Q6IQ49 451 aa7.77□□□□□ -1.17
COPA-203ENST00000481040 MCF2L2Q86YR7 1114 aa7.77□□□□□ -1.17
COPA-203ENST00000481040 FHDC1Q9C0D6 1143 aaPredicted RBP7.77□□□□□ -1.17
COPA-203ENST00000481040 C12orf49Q9H741 205 aa7.77□□□□□ -1.17
COPA-203ENST00000481040 ZNF395Q9H8N7 513 aaPredicted RBP7.77□□□□□ -1.17
COPA-203ENST00000481040 FAM13BQ9NYF5 915 aa7.77□□□□□ -1.17
COPA-203ENST00000481040 TBX22Q9Y458 520 aa7.77□□□□□ -1.17
COPA-203ENST00000481040 GIPC1O14908 333 aa7.76□□□□□ -1.17
COPA-203ENST00000481040 STK10O94804 968 aaKnown RBP7.76□□□□□ -1.17
COPA-203ENST00000481040 CENPCQ03188 943 aa7.76□□□□□ -1.17
COPA-203ENST00000481040 C1orf53Q5VUE5 145 aa7.76□□□□□ -1.17
COPA-203ENST00000481040 SBNO2Q9Y2G9 1366 aa7.75□□□□□ -1.17
COPA-203ENST00000481040 SENP3-EIF4A1A0A087X0R7 540 aa7.75□□□□□ -1.17
COPA-203ENST00000481040 SLC35F4A4IF30 521 aa7.75□□□□□ -1.17
COPA-203ENST00000481040 ADH1AP07327 375 aa7.75□□□□□ -1.17
COPA-203ENST00000481040 FGRP09769 529 aa7.75□□□□□ -1.17
COPA-203ENST00000481040 GJA8P48165 433 aa7.75□□□□□ -1.17
COPA-203ENST00000481040 TAF1CQ15572 869 aaPredicted RBP7.75□□□□□ -1.17
COPA-203ENST00000481040 CCDC155Q8N6L0 562 aa7.75□□□□□ -1.17
COPA-203ENST00000481040 RNF217Q8TC41 542 aa7.75□□□□□ -1.17
COPA-203ENST00000481040 OSBPL7Q9BZF2 842 aa7.75□□□□□ -1.17
COPA-203ENST00000481040 OSBPL2Q9H1P3 480 aa7.75□□□□□ -1.17
COPA-203ENST00000481040 RNFT1Q5M7Z0 435 aa7.74□□□□□ -1.17
COPA-203ENST00000481040 MEI1Q5TIA1 1274 aa7.74□□□□□ -1.17
COPA-203ENST00000481040 EGFLAMQ63HQ2 1017 aa7.74□□□□□ -1.17
COPA-203ENST00000481040 PI16Q6UXB8 463 aa7.74□□□□□ -1.17
COPA-203ENST00000481040 PPARGC1BQ86YN6 1023 aaKnown RBP7.74□□□□□ -1.17
COPA-203ENST00000481040 CCDC74AQ96AQ1 378 aa7.74□□□□□ -1.17
COPA-203ENST00000481040 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.74□□□□□ -1.176e-9■□□□□ 9.7
COPA-203ENST00000481040 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.74□□□□□ -1.17
COPA-203ENST00000481040 BCS1LQ9Y276 419 aa7.74□□□□□ -1.17
COPA-203ENST00000481040 MICAL2O94851 1124 aa7.73□□□□□ -1.17
COPA-203ENST00000481040 ATF4P18848 351 aaPredicted RBP7.73□□□□□ -1.17
COPA-203ENST00000481040 PAK2Q13177 524 aa7.73□□□□□ -1.17
COPA-203ENST00000481040 USPL1Q5W0Q7 1092 aa7.73□□□□□ -1.17
COPA-203ENST00000481040 EPS8L3Q8TE67 593 aaKnown RBP7.73□□□□□ -1.17
COPA-203ENST00000481040 NIFKQ9BYG3 293 aaKnown RBP7.73□□□□□ -1.17
COPA-203ENST00000481040 FAM8A1Q9UBU6 413 aa7.73□□□□□ -1.17
COPA-203ENST00000481040 TNFRSF21O75509 655 aa7.72□□□□□ -1.17
COPA-203ENST00000481040 IRS1P35568 1242 aa7.72□□□□□ -1.17
COPA-203ENST00000481040 ST13P50502 369 aaKnown RBP7.72□□□□□ -1.17
COPA-203ENST00000481040 ZNF746Q6NUN9 644 aaPredicted RBP7.72□□□□□ -1.17
COPA-203ENST00000481040 NLGN1Q8N2Q7 840 aa7.72□□□□□ -1.17
COPA-203ENST00000481040 CNTNAP3BQ96NU0 1288 aa7.72□□□□□ -1.17
COPA-203ENST00000481040 NLRP3Q96P20 1036 aa7.72□□□□□ -1.17
COPA-203ENST00000481040 ZSCAN10Q96SZ4 725 aaPredicted RBP7.72□□□□□ -1.17
COPA-203ENST00000481040 CHMP4AQ9BY43 222 aa7.72□□□□□ -1.17
COPA-203ENST00000481040 CNTNAP3Q9BZ76 1288 aa7.72□□□□□ -1.17
COPA-203ENST00000481040 POLMQ9NP87 494 aaPredicted RBP7.72□□□□□ -1.17
COPA-203ENST00000481040 FOXD3Q9UJU5 478 aaPredicted RBP7.72□□□□□ -1.17
COPA-203ENST00000481040 MEN1O00255 615 aa7.71□□□□□ -1.18
COPA-203ENST00000481040 USP17L7P0C7H9 530 aa7.71□□□□□ -1.18
COPA-203ENST00000481040 TXLNAP40222 546 aa7.71□□□□□ -1.18
COPA-203ENST00000481040 PTGIRP43119 386 aa7.71□□□□□ -1.18
COPA-203ENST00000481040 BMS1Q14692 1282 aaKnown RBP7.71□□□□□ -1.18
COPA-203ENST00000481040 ERMP1Q7Z2K6 904 aa7.71□□□□□ -1.18
COPA-203ENST00000481040 NANOS1Q8WY41 292 aaKnown RBP7.71□□□□□ -1.18
COPA-203ENST00000481040 GPRASP2Q96D09 838 aa7.71□□□□□ -1.18
COPA-203ENST00000481040 FAM181BA6NEQ2 426 aa7.7□□□□□ -1.18
COPA-203ENST00000481040 TGFBR3LH3BV60 316 aa7.7□□□□□ -1.18
COPA-203ENST00000481040 GSK3AP49840 483 aa7.7□□□□□ -1.18
COPA-203ENST00000481040 TMEM214Q6NUQ4 689 aaKnown RBP7.7□□□□□ -1.18
COPA-203ENST00000481040 XKR5Q6UX68 686 aa7.7□□□□□ -1.18
COPA-203ENST00000481040 RHBDD1Q8TEB9 315 aa7.7□□□□□ -1.18
COPA-203ENST00000481040 SNX29Q8TEQ0 813 aa7.7□□□□□ -1.18
COPA-203ENST00000481040 COL25A1Q9BXS0 654 aaPredicted RBP7.7□□□□□ -1.18
COPA-203ENST00000481040 ITGA6P23229 1130 aa7.69□□□□□ -1.18
COPA-203ENST00000481040 GTF2E1P29083 439 aaPredicted RBP7.69□□□□□ -1.18
COPA-203ENST00000481040 HIF1AQ16665 826 aa7.69□□□□□ -1.18
COPA-203ENST00000481040 JAZF1Q86VZ6 243 aa7.69□□□□□ -1.18
COPA-203ENST00000481040 VWA5B2Q8N398 1253 aa7.69□□□□□ -1.18
COPA-203ENST00000481040 RHPN1Q8TCX5 695 aa7.69□□□□□ -1.18
COPA-203ENST00000481040 SPACA7Q96KW9 195 aa7.69□□□□□ -1.18
COPA-203ENST00000481040 SRCIN1Q9C0H9 1055 aa7.69□□□□□ -1.18
COPA-203ENST00000481040 ZFYVE28Q9HCC9 887 aa7.69□□□□□ -1.18
COPA-203ENST00000481040 COPRSQ9NQ92 184 aa7.69□□□□□ -1.18
COPA-203ENST00000481040 TCEAL1Q15170 157 aa7.68□□□□□ -1.18
COPA-203ENST00000481040 NFE2L2Q16236 605 aa7.68□□□□□ -1.18
COPA-203ENST00000481040 NXPE4Q6UWF7 544 aa7.68□□□□□ -1.18
COPA-203ENST00000481040 CKAP2LQ8IYA6 745 aa7.68□□□□□ -1.18
COPA-203ENST00000481040 RASGRP4Q8TDF6 673 aa7.68□□□□□ -1.18
COPA-203ENST00000481040 C7orf43Q8WVR3 580 aa7.68□□□□□ -1.18
COPA-203ENST00000481040 NEUROD4Q9HD90 331 aa7.68□□□□□ -1.18
COPA-203ENST00000481040 PHACTR2O75167 634 aa7.67□□□□□ -1.18
COPA-203ENST00000481040 IDH3AP50213 366 aa7.67□□□□□ -1.18
COPA-203ENST00000481040 PDE12Q6L8Q7 609 aaKnown RBP7.67□□□□□ -1.18
COPA-203ENST00000481040 ZNF438Q7Z4V0 828 aa7.67□□□□□ -1.18
COPA-203ENST00000481040 WHAMMQ8TF30 809 aa7.67□□□□□ -1.18
COPA-203ENST00000481040 MRFAP1L1Q96HT8 127 aa7.67□□□□□ -1.18
COPA-203ENST00000481040 CWC22Q9HCG8 908 aaKnown RBP7.67□□□□□ -1.18
COPA-203ENST00000481040 NPHS2Q9NP85 383 aa7.67□□□□□ -1.18
COPA-203ENST00000481040 DMGDHQ9UI17 866 aaKnown RBP7.67□□□□□ -1.18
COPA-203ENST00000481040 FNDC3AQ9Y2H6 1198 aaKnown RBP7.67□□□□□ -1.18
COPA-203ENST00000481040 CDC14CA4D256 554 aa7.66□□□□□ -1.18
COPA-203ENST00000481040 RHOQP17081 205 aa7.66□□□□□ -1.18
COPA-203ENST00000481040 PLA2G4AP47712 749 aa7.66□□□□□ -1.18
COPA-203ENST00000481040 GNASQ5JWF2 1037 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms