RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 CAMK4Q16566 473 aa16.85■□□□□ 0.29
NR1H3-220ENST00000481020 KRT222Q8N1A0 295 aa16.85■□□□□ 0.29
NR1H3-220ENST00000481020 THEMISQ8N1K5 641 aaPredicted RBP16.85■□□□□ 0.29
NR1H3-220ENST00000481020 KIF18AQ8NI77 898 aa16.85■□□□□ 0.29
NR1H3-220ENST00000481020 CACTINQ8WUQ7 758 aaKnown RBP16.85■□□□□ 0.29
NR1H3-220ENST00000481020 GTF3C6Q969F1 213 aa16.85■□□□□ 0.29
NR1H3-220ENST00000481020 LARP6Q9BRS8 491 aaKnown RBP16.85■□□□□ 0.29
NR1H3-220ENST00000481020 ARHGAP23Q9P227 1491 aa16.85■□□□□ 0.29
NR1H3-220ENST00000481020 HMGB1P09429 215 aaKnown RBP16.84■□□□□ 0.29
NR1H3-220ENST00000481020 NMIQ13287 307 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-220ENST00000481020 TOB2Q14106 344 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-220ENST00000481020 PTPN14Q15678 1187 aa16.84■□□□□ 0.29
NR1H3-220ENST00000481020 KSR2Q6VAB6 950 aa16.84■□□□□ 0.29
NR1H3-220ENST00000481020 AACSQ86V21 672 aa16.84■□□□□ 0.29
NR1H3-220ENST00000481020 CKAP2LQ8IYA6 745 aa16.84■□□□□ 0.29
NR1H3-220ENST00000481020 NAT10Q9H0A0 1025 aaKnown RBP16.84■□□□□ 0.29
NR1H3-220ENST00000481020 ANO10Q9NW15 660 aa16.84■□□□□ 0.29
NR1H3-220ENST00000481020 FAM53CQ9NYF3 392 aa16.84■□□□□ 0.29
NR1H3-220ENST00000481020 C9orf78Q9NZ63 289 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-220ENST00000481020 CHPF2Q9P2E5 772 aa16.84■□□□□ 0.29
NR1H3-220ENST00000481020 LMO7Q8WWI1 1683 aa16.84■□□□□ 0.29
NR1H3-220ENST00000481020 SPDYE4A6NLX3 237 aa16.84■□□□□ 0.29
NR1H3-220ENST00000481020 G3BP1Q13283 466 aaKnown RBP eCLIP16.84■□□□□ 0.29
NR1H3-220ENST00000481020 LARP1Q6PKG0 1096 aaKnown RBP16.84■□□□□ 0.29
NR1H3-220ENST00000481020 RCOR1Q9UKL0 485 aa16.84■□□□□ 0.29
NR1H3-220ENST00000481020 TBX22Q9Y458 520 aa16.84■□□□□ 0.29
NR1H3-220ENST00000481020 EID1Q9Y6B2 187 aa16.84■□□□□ 0.29
NR1H3-220ENST00000481020 ZBTB7CA1YPR0 619 aa16.83■□□□□ 0.28
NR1H3-220ENST00000481020 CCDC66A2RUB6 948 aa16.83■□□□□ 0.28
NR1H3-220ENST00000481020 NR1I2O75469 434 aa16.83■□□□□ 0.28
NR1H3-220ENST00000481020 LTKP29376 864 aa16.83■□□□□ 0.28
NR1H3-220ENST00000481020 LRMPQ12912 555 aa16.83■□□□□ 0.28
NR1H3-220ENST00000481020 LINS1Q8NG48 757 aa16.83■□□□□ 0.28
NR1H3-220ENST00000481020 PGBD1Q96JS3 809 aa16.83■□□□□ 0.28
NR1H3-220ENST00000481020 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
NR1H3-220ENST00000481020 FAM177BA6PVY3 158 aa16.82■□□□□ 0.28
NR1H3-220ENST00000481020 NLRP6P59044 892 aa16.82■□□□□ 0.28
NR1H3-220ENST00000481020 FERMT3Q86UX7 667 aa16.82■□□□□ 0.28
NR1H3-220ENST00000481020 DNAJC25Q9H1X3 360 aa16.82■□□□□ 0.28
NR1H3-220ENST00000481020 HEG1Q9ULI3 1381 aa16.82■□□□□ 0.28
NR1H3-220ENST00000481020 MARF1Q9Y4F3 1742 aaKnown RBP16.82■□□□□ 0.28
NR1H3-220ENST00000481020 DDX58O95786 925 aaKnown RBP16.82■□□□□ 0.28
NR1H3-220ENST00000481020 AKAP4Q5JQC9 854 aa16.82■□□□□ 0.28
NR1H3-220ENST00000481020 RGS22Q8NE09 1264 aa16.82■□□□□ 0.28
NR1H3-220ENST00000481020 SMARCC2Q8TAQ2 1214 aa16.82■□□□□ 0.28
NR1H3-220ENST00000481020 ZNF396Q96N95 335 aaPredicted RBP16.82■□□□□ 0.28
NR1H3-220ENST00000481020 OSBPL5Q9H0X9 879 aaPredicted RBP16.82■□□□□ 0.28
NR1H3-220ENST00000481020 H3BQV1 296 aa16.81■□□□□ 0.28
NR1H3-220ENST00000481020 NRDCO43847 1150 aa16.81■□□□□ 0.28
NR1H3-220ENST00000481020 AMOTQ4VCS5 1084 aa16.81■□□□□ 0.28
NR1H3-220ENST00000481020 IFFO2Q5TF58 517 aa16.81■□□□□ 0.28
NR1H3-220ENST00000481020 CCDC73Q6ZRK6 1079 aa16.81■□□□□ 0.28
NR1H3-220ENST00000481020 CEP57L1Q8IYX8 460 aa16.81■□□□□ 0.28
NR1H3-220ENST00000481020 BPIFA3Q9BQP9 254 aa16.81■□□□□ 0.28
NR1H3-220ENST00000481020 FSD1Q9BTV5 496 aa16.81■□□□□ 0.28
NR1H3-220ENST00000481020 NRBP1Q9UHY1 535 aa16.81■□□□□ 0.28
NR1H3-220ENST00000481020 PHRF1Q9P1Y6 1649 aaKnown RBP16.81■□□□□ 0.28
NR1H3-220ENST00000481020 BECN2A8MW95 431 aa16.8■□□□□ 0.28
NR1H3-220ENST00000481020 GRM8O00222 908 aa16.8■□□□□ 0.28
NR1H3-220ENST00000481020 SOX12O15370 315 aa16.8■□□□□ 0.28
NR1H3-220ENST00000481020 CCP110O43303 1012 aa16.8■□□□□ 0.28
NR1H3-220ENST00000481020 SKILP12757 684 aa16.8■□□□□ 0.28
NR1H3-220ENST00000481020 EIF2S2P20042 333 aaKnown RBP16.8■□□□□ 0.28
NR1H3-220ENST00000481020 ZNF771Q7L3S4 317 aaPredicted RBP16.8■□□□□ 0.28
NR1H3-220ENST00000481020 FAM227BQ96M60 508 aa16.8■□□□□ 0.28
NR1H3-220ENST00000481020 NEK1Q96PY6 1258 aa16.8■□□□□ 0.28
NR1H3-220ENST00000481020 NUTM2FA1L443 756 aa16.79■□□□□ 0.28
NR1H3-220ENST00000481020 TAF5LO75529 589 aa16.79■□□□□ 0.28
NR1H3-220ENST00000481020 SLU7O95391 586 aaKnown RBP16.79■□□□□ 0.28
NR1H3-220ENST00000481020 TEFQ10587 303 aa16.79■□□□□ 0.28
NR1H3-220ENST00000481020 NUTM2GQ5VZR2 741 aa16.79■□□□□ 0.28
NR1H3-220ENST00000481020 CCDC150Q8NCX0 1101 aa16.79■□□□□ 0.28
NR1H3-220ENST00000481020 PSDA5PKW4 1024 aaPredicted RBP16.79■□□□□ 0.28
NR1H3-220ENST00000481020 KINO60870 393 aaKnown RBP16.79■□□□□ 0.28
NR1H3-220ENST00000481020 FAM160A1Q05DH4 1040 aa16.79■□□□□ 0.28
NR1H3-220ENST00000481020 CCDC144BQ3MJ40 725 aa16.79■□□□□ 0.28
NR1H3-220ENST00000481020 TPRNQ4KMQ1 711 aa16.79■□□□□ 0.28
NR1H3-220ENST00000481020 CCDC144CPQ8IYA2 1237 aa16.79■□□□□ 0.28
NR1H3-220ENST00000481020 CCAR2Q8N163 923 aaKnown RBP16.79■□□□□ 0.28
NR1H3-220ENST00000481020 IP6K1Q92551 441 aa16.79■□□□□ 0.28
NR1H3-220ENST00000481020 TFIP11Q9UBB9 837 aaKnown RBP16.79■□□□□ 0.28
NR1H3-220ENST00000481020 MAP3K2Q9Y2U5 619 aa16.79■□□□□ 0.28
NR1H3-220ENST00000481020 COL15A1P39059 1388 aa16.78■□□□□ 0.28
NR1H3-220ENST00000481020 A0A0D9SFI3 127 aa16.78■□□□□ 0.28
NR1H3-220ENST00000481020 PFKFB2O60825 505 aa16.78■□□□□ 0.28
NR1H3-220ENST00000481020 SASH1O94885 1247 aa16.78■□□□□ 0.28
NR1H3-220ENST00000481020 SLFN14P0C7P3 912 aa16.78■□□□□ 0.28
NR1H3-220ENST00000481020 ATP5JP18859 108 aa16.78■□□□□ 0.28
NR1H3-220ENST00000481020 TERF2Q15554 542 aa16.78■□□□□ 0.28
NR1H3-220ENST00000481020 BRF1Q92994 677 aa16.78■□□□□ 0.28
NR1H3-220ENST00000481020 EAF2Q96CJ1 260 aaPredicted RBP16.78■□□□□ 0.28
NR1H3-220ENST00000481020 L2HGDHQ9H9P8 463 aa16.78■□□□□ 0.28
NR1H3-220ENST00000481020 CHMP3Q9Y3E7 222 aa16.78■□□□□ 0.28
NR1H3-220ENST00000481020 BTBD11A6QL63 1104 aa16.77■□□□□ 0.28
NR1H3-220ENST00000481020 CCZ1BP86790 482 aa16.77■□□□□ 0.28
NR1H3-220ENST00000481020 CCZ1P86791 482 aaPredicted RBP16.77■□□□□ 0.28
NR1H3-220ENST00000481020 PLEKHO1Q53GL0 409 aaPredicted RBP16.77■□□□□ 0.28
NR1H3-220ENST00000481020 AMOTL2Q9Y2J4 779 aa16.77■□□□□ 0.28
NR1H3-220ENST00000481020 A0A1W2PQ27 194 aa16.76■□□□□ 0.27
NR1H3-220ENST00000481020 A0A1W2PQ64 194 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms