RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 MAP3K19Q56UN5 1328 aa6.71□□□□□ -1.34
PTCD3-213ENST00000480102 NSD3Q9BZ95 1437 aa6.7□□□□□ -1.34
PTCD3-213ENST00000480102 HOXC9P31274 260 aa6.7□□□□□ -1.34
PTCD3-213ENST00000480102 ZEB1P37275 1124 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-213ENST00000480102 SMCPP49901 116 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-213ENST00000480102 AGERQ15109 404 aa6.7□□□□□ -1.34
PTCD3-213ENST00000480102 CHRNA2Q15822 529 aa6.7□□□□□ -1.34
PTCD3-213ENST00000480102 NUTM2GQ5VZR2 741 aa6.7□□□□□ -1.34
PTCD3-213ENST00000480102 FAM174AQ8TBP5 190 aa6.7□□□□□ -1.34
PTCD3-213ENST00000480102 HPS1Q92902 700 aa6.7□□□□□ -1.34
PTCD3-213ENST00000480102 FKBPLQ9UIM3 349 aa6.7□□□□□ -1.34
PTCD3-213ENST00000480102 OVOS2A0A0G2JMS6 1433 aa6.69□□□□□ -1.34
PTCD3-213ENST00000480102 PLCH1Q4KWH8 1693 aa6.69□□□□□ -1.34
PTCD3-213ENST00000480102 AXIN1O15169 862 aa6.69□□□□□ -1.34
PTCD3-213ENST00000480102 TOM1L2Q6ZVM7 507 aa6.69□□□□□ -1.34
PTCD3-213ENST00000480102 C1QTNF2Q9BXJ5 285 aa6.69□□□□□ -1.34
PTCD3-213ENST00000480102 PANK3Q9H999 370 aa6.69□□□□□ -1.34
PTCD3-213ENST00000480102 KNSTRNQ9Y448 316 aa6.69□□□□□ -1.34
PTCD3-213ENST00000480102 WASF2Q9Y6W5 498 aa6.69□□□□□ -1.34
PTCD3-213ENST00000480102 ZC3H4Q9UPT8 1303 aaKnown RBP6.69□□□□□ -1.34
PTCD3-213ENST00000480102 TNS2Q63HR2 1409 aa6.68□□□□□ -1.34
PTCD3-213ENST00000480102 COL18A1P39060 1754 aa6.68□□□□□ -1.34
PTCD3-213ENST00000480102 PLSCR1O15162 318 aa6.68□□□□□ -1.34
PTCD3-213ENST00000480102 IL2RBP14784 551 aa6.68□□□□□ -1.34
PTCD3-213ENST00000480102 AMPHP49418 695 aa6.68□□□□□ -1.34
PTCD3-213ENST00000480102 PDE3BQ13370 1112 aa6.68□□□□□ -1.34
PTCD3-213ENST00000480102 DDB1Q16531 1140 aa6.68□□□□□ -1.34
PTCD3-213ENST00000480102 EPS8L1Q8TE68 723 aa6.68□□□□□ -1.34
PTCD3-213ENST00000480102 CDK15Q96Q40 435 aa6.68□□□□□ -1.34
PTCD3-213ENST00000480102 CCDC9Q9Y3X0 531 aaKnown RBP6.68□□□□□ -1.34
PTCD3-213ENST00000480102 MAGEB6P1A0A0J9YX57 407 aa6.67□□□□□ -1.34
PTCD3-213ENST00000480102 ADH1CP00326 375 aa6.67□□□□□ -1.34
PTCD3-213ENST00000480102 PDXDC2PQ6P474 469 aa6.67□□□□□ -1.34
PTCD3-213ENST00000480102 ANKRD24Q8TF21 1146 aa6.67□□□□□ -1.34
PTCD3-213ENST00000480102 GGNBP2Q9H3C7 697 aa6.67□□□□□ -1.34
PTCD3-213ENST00000480102 STRN4Q9NRL3 753 aa6.67□□□□□ -1.34
PTCD3-213ENST00000480102 POLKQ9UBT6 870 aa6.67□□□□□ -1.34
PTCD3-213ENST00000480102 MYOM1P52179 1685 aa6.66□□□□□ -1.34
PTCD3-213ENST00000480102 EXOC5O00471 708 aa6.66□□□□□ -1.34
PTCD3-213ENST00000480102 CSB-PGBD3P0DP91 1061 aa6.66□□□□□ -1.34
PTCD3-213ENST00000480102 SF3B2Q13435 895 aaKnown RBP6.66□□□□□ -1.34
PTCD3-213ENST00000480102 TRMT44Q8IYL2 757 aaKnown RBP6.66□□□□□ -1.34
PTCD3-213ENST00000480102 PNMA1Q8ND90 353 aa6.66□□□□□ -1.34
PTCD3-213ENST00000480102 TRIM34Q9BYJ4 488 aa6.66□□□□□ -1.34
PTCD3-213ENST00000480102 KDRP35968 1356 aa6.66□□□□□ -1.34
PTCD3-213ENST00000480102 SRCAPQ6ZRS2 3230 aa6.66□□□□□ -1.34
PTCD3-213ENST00000480102 PARP4Q9UKK3 1724 aaKnown RBP6.65□□□□□ -1.34
PTCD3-213ENST00000480102 BAG6P46379 1132 aa6.65□□□□□ -1.34
PTCD3-213ENST00000480102 NNTQ13423 1086 aa6.65□□□□□ -1.34
PTCD3-213ENST00000480102 ARID5BQ14865 1188 aa6.65□□□□□ -1.34
PTCD3-213ENST00000480102 ERFEQ4G0M1 354 aa6.65□□□□□ -1.34
PTCD3-213ENST00000480102 BANK1Q8NDB2 785 aa6.65□□□□□ -1.34
PTCD3-213ENST00000480102 ARHGAP9Q9BRR9 750 aa6.65□□□□□ -1.34
PTCD3-213ENST00000480102 NLRP2Q9NX02 1062 aa6.65□□□□□ -1.34
PTCD3-213ENST00000480102 DACH1Q9UI36 760 aa6.65□□□□□ -1.34
PTCD3-213ENST00000480102 MAP4K5Q9Y4K4 846 aa6.65□□□□□ -1.34
PTCD3-213ENST00000480102 IGSF1Q8N6C5 1336 aa6.65□□□□□ -1.35
PTCD3-213ENST00000480102 HSP90AB2PQ58FF8 381 aa6.64□□□□□ -1.35
PTCD3-213ENST00000480102 ZNF787Q6DD87 383 aa6.64□□□□□ -1.35
PTCD3-213ENST00000480102 CAMKK2Q96RR4 588 aa6.64□□□□□ -1.35
PTCD3-213ENST00000480102 OCSTAMPQ9BR26 566 aa6.64□□□□□ -1.35
PTCD3-213ENST00000480102 GPSM3Q9Y4H4 160 aa6.64□□□□□ -1.35
PTCD3-213ENST00000480102 GRM5P41594 1212 aa6.63□□□□□ -1.35
PTCD3-213ENST00000480102 PTK2Q05397 1052 aa6.63□□□□□ -1.35
PTCD3-213ENST00000480102 NR5A1Q13285 461 aa6.63□□□□□ -1.35
PTCD3-213ENST00000480102 RRS1Q15050 365 aaKnown RBP6.63□□□□□ -1.35
PTCD3-213ENST00000480102 AMOTQ4VCS5 1084 aa6.63□□□□□ -1.35
PTCD3-213ENST00000480102 NBPF6Q5VWK0 638 aa6.63□□□□□ -1.35
PTCD3-213ENST00000480102 MORC1Q86VD1 984 aa6.63□□□□□ -1.35
PTCD3-213ENST00000480102 MARCH10Q8NA82 808 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-213ENST00000480102 ZCRB1Q8TBF4 217 aaKnown RBP6.63□□□□□ -1.35
PTCD3-213ENST00000480102 RAPGEF4Q8WZA2 1011 aa6.63□□□□□ -1.35
PTCD3-213ENST00000480102 NBPF4Q96M43 638 aa6.63□□□□□ -1.35
PTCD3-213ENST00000480102 FAM208AQ9UK61 1670 aaKnown RBP6.63□□□□□ -1.35
PTCD3-213ENST00000480102 ANKRD26Q9UPS8 1709 aa6.63□□□□□ -1.35
PTCD3-213ENST00000480102 EMILIN1Q9Y6C2 1016 aa6.63□□□□□ -1.35
PTCD3-213ENST00000480102 PCDH11XQ9BZA7 1347 aa6.62□□□□□ -1.35
PTCD3-213ENST00000480102 PCDH11YQ9BZA8 1340 aa6.62□□□□□ -1.35
PTCD3-213ENST00000480102 POTECB2RU33 542 aa6.62□□□□□ -1.35
PTCD3-213ENST00000480102 CAPN5O15484 640 aaPredicted RBP6.62□□□□□ -1.35
PTCD3-213ENST00000480102 NR3C2P08235 984 aa6.62□□□□□ -1.35
PTCD3-213ENST00000480102 HSP90AB1P08238 724 aaKnown RBP6.62□□□□□ -1.35
PTCD3-213ENST00000480102 FSHRP23945 695 aa6.62□□□□□ -1.35
PTCD3-213ENST00000480102 VASH1Q7L8A9 365 aaPredicted RBP6.62□□□□□ -1.35
PTCD3-213ENST00000480102 ZBTB33Q86T24 672 aa6.62□□□□□ -1.35
PTCD3-213ENST00000480102 MTMR14Q8NCE2 650 aa6.62□□□□□ -1.35
PTCD3-213ENST00000480102 ATP13A2Q9NQ11 1180 aa6.62□□□□□ -1.35
PTCD3-213ENST00000480102 USP35Q9P2H5 1018 aa6.62□□□□□ -1.35
PTCD3-213ENST00000480102 LRRC37A3O60309 1634 aa6.61□□□□□ -1.35
PTCD3-213ENST00000480102 TIMP2P16035 220 aa6.61□□□□□ -1.35
PTCD3-213ENST00000480102 TATP17735 454 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-213ENST00000480102 EIF4A2Q14240 407 aaKnown RBP6.61□□□□□ -1.35
PTCD3-213ENST00000480102 SLC27A3Q5K4L6 730 aa6.61□□□□□ -1.35
PTCD3-213ENST00000480102 ADAM32Q8TC27 787 aa6.61□□□□□ -1.35
PTCD3-213ENST00000480102 SLC10A4Q96EP9 437 aa6.61□□□□□ -1.35
PTCD3-213ENST00000480102 KLF16Q9BXK1 252 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-213ENST00000480102 GMPR2Q9P2T1 348 aaKnown RBP6.61□□□□□ -1.35
PTCD3-213ENST00000480102 CDV3Q9UKY7 258 aaKnown RBP6.61□□□□□ -1.35
PTCD3-213ENST00000480102 SPG7Q9UQ90 795 aa6.61□□□□□ -1.35
PTCD3-213ENST00000480102 PEAK1Q9H792 1746 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms