RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 GPC6Q9Y625 555 aaPredicted RBP8.51□□□□□ -1.05
UPF3A-205ENST00000479712 SETBP1Q9Y6X0 1596 aa8.51□□□□□ -1.05
UPF3A-205ENST00000479712 BICDL1Q6ZP65 573 aa8.5□□□□□ -1.05
UPF3A-205ENST00000479712 GPR152Q8TDT2 470 aa8.5□□□□□ -1.05
UPF3A-205ENST00000479712 C7orf43Q8WVR3 580 aa8.5□□□□□ -1.05
UPF3A-205ENST00000479712 SUSD3Q96L08 255 aa8.5□□□□□ -1.05
UPF3A-205ENST00000479712 AAASQ9NRG9 546 aa8.5□□□□□ -1.05
UPF3A-205ENST00000479712 FAM13BQ9NYF5 915 aa8.5□□□□□ -1.05
UPF3A-205ENST00000479712 KIAA0556O60303 1618 aa8.5□□□□□ -1.05
UPF3A-205ENST00000479712 WDR7Q9Y4E6 1490 aa8.5□□□□□ -1.05
UPF3A-205ENST00000479712 FRMPD1Q5SYB0 1578 aa8.49□□□□□ -1.05
UPF3A-205ENST00000479712 MICAL2O94851 1124 aa8.49□□□□□ -1.05
UPF3A-205ENST00000479712 SCARF1Q14162 830 aa8.49□□□□□ -1.05
UPF3A-205ENST00000479712 WDR44Q5JSH3 913 aa8.49□□□□□ -1.05
UPF3A-205ENST00000479712 NUDT16Q96DE0 195 aaKnown RBP8.49□□□□□ -1.05
UPF3A-205ENST00000479712 NIF3L1Q9GZT8 377 aa8.49□□□□□ -1.05
UPF3A-205ENST00000479712 TTLL8A6PVC2 850 aa8.48□□□□□ -1.05
UPF3A-205ENST00000479712 ST8SIA5O15466 376 aa8.48□□□□□ -1.05
UPF3A-205ENST00000479712 LDHBP07195 334 aaKnown RBP8.48□□□□□ -1.05
UPF3A-205ENST00000479712 ATP4AP20648 1035 aa8.48□□□□□ -1.05
UPF3A-205ENST00000479712 VAMP1P23763 118 aa8.48□□□□□ -1.05
UPF3A-205ENST00000479712 FGD1P98174 961 aa8.48□□□□□ -1.05
UPF3A-205ENST00000479712 IER5Q5VY09 327 aa8.48□□□□□ -1.05
UPF3A-205ENST00000479712 ZNF280CQ8ND82 737 aa8.48□□□□□ -1.05
UPF3A-205ENST00000479712 TTC16Q8NEE8 873 aa8.48□□□□□ -1.05
UPF3A-205ENST00000479712 KLRG1Q96E93 195 aa8.48□□□□□ -1.05
UPF3A-205ENST00000479712 HSH2DQ96JZ2 352 aa8.48□□□□□ -1.05
UPF3A-205ENST00000479712 TIMMDC1Q9NPL8 285 aa8.48□□□□□ -1.05
UPF3A-205ENST00000479712 ARHGEF40Q8TER5 1519 aa8.48□□□□□ -1.05
UPF3A-205ENST00000479712 KDM5BQ9UGL1 1544 aa8.48□□□□□ -1.05
UPF3A-205ENST00000479712 NCOA1Q15788 1441 aa8.47□□□□□ -1.05
UPF3A-205ENST00000479712 UHRF1BP1LA0JNW5 1464 aa8.47□□□□□ -1.05
UPF3A-205ENST00000479712 A0A1B0GTH6 734 aa8.47□□□□□ -1.05
UPF3A-205ENST00000479712 BMP1P13497 986 aa8.47□□□□□ -1.05
UPF3A-205ENST00000479712 RHOQP17081 205 aa8.47□□□□□ -1.05
UPF3A-205ENST00000479712 ATP2B2Q01814 1243 aa8.47□□□□□ -1.05
UPF3A-205ENST00000479712 ARSJQ5FYB0 599 aaPredicted RBP8.47□□□□□ -1.05
UPF3A-205ENST00000479712 NEUROD4Q9HD90 331 aa8.47□□□□□ -1.05
UPF3A-205ENST00000479712 IGSF5Q9NSI5 407 aa8.47□□□□□ -1.05
UPF3A-205ENST00000479712 ANKIB1Q9P2G1 1089 aa8.47□□□□□ -1.05
UPF3A-205ENST00000479712 UACAQ9BZF9 1416 aa8.46□□□□□ -1.05
UPF3A-205ENST00000479712 PRPF40AO75400 957 aaKnown RBP8.46□□□□□ -1.06
UPF3A-205ENST00000479712 AVPP01185 164 aa8.46□□□□□ -1.06
UPF3A-205ENST00000479712 RPLP1P05386 114 aaKnown RBP8.46□□□□□ -1.06
UPF3A-205ENST00000479712 IDH3AP50213 366 aa8.46□□□□□ -1.06
UPF3A-205ENST00000479712 C8orf34Q49A92 452 aa8.46□□□□□ -1.06
UPF3A-205ENST00000479712 PIK3R5Q8WYR1 880 aa8.46□□□□□ -1.06
UPF3A-205ENST00000479712 DMGDHQ9UI17 866 aaKnown RBP8.46□□□□□ -1.06
UPF3A-205ENST00000479712 ALKQ9UM73 1620 aa8.46□□□□□ -1.06
UPF3A-205ENST00000479712 POGZQ7Z3K3 1410 aa8.46□□□□□ -1.06
UPF3A-205ENST00000479712 PNMA6FA0A0J9YX94 578 aa8.45□□□□□ -1.06
UPF3A-205ENST00000479712 MSX1P28360 303 aa8.45□□□□□ -1.06
UPF3A-205ENST00000479712 XPCQ01831 940 aaPredicted RBP8.45□□□□□ -1.06
UPF3A-205ENST00000479712 ZIC5Q96T25 663 aa8.45□□□□□ -1.06
UPF3A-205ENST00000479712 SOS2Q07890 1332 aaPredicted RBP8.45□□□□□ -1.06
UPF3A-205ENST00000479712 FANCAO15360 1455 aa8.45□□□□□ -1.06
UPF3A-205ENST00000479712 A6NHS1 94 aa8.44□□□□□ -1.06
UPF3A-205ENST00000479712 FIGNL2A6NMB9 653 aa8.44□□□□□ -1.06
UPF3A-205ENST00000479712 OPLAHO14841 1288 aa8.44□□□□□ -1.06
UPF3A-205ENST00000479712 RECKO95980 971 aa8.44□□□□□ -1.06
UPF3A-205ENST00000479712 TCF3P15923 654 aa8.44□□□□□ -1.06
UPF3A-205ENST00000479712 ARSDP51689 593 aa8.44□□□□□ -1.06
UPF3A-205ENST00000479712 ENOX2Q16206 610 aaKnown RBP8.44□□□□□ -1.06
UPF3A-205ENST00000479712 LRRC69Q6ZNQ3 347 aa8.44□□□□□ -1.06
UPF3A-205ENST00000479712 BTLAQ7Z6A9 289 aa8.44□□□□□ -1.06
UPF3A-205ENST00000479712 DUSP9Q99956 384 aaKnown RBP8.44□□□□□ -1.06
UPF3A-205ENST00000479712 GGNBP2Q9H3C7 697 aa8.44□□□□□ -1.06
UPF3A-205ENST00000479712 TNIKQ9UKE5 1360 aa8.44□□□□□ -1.06
UPF3A-205ENST00000479712 SENP3-EIF4A1A0A087X0R7 540 aa8.43□□□□□ -1.06
UPF3A-205ENST00000479712 CTC1Q2NKJ3 1217 aa8.43□□□□□ -1.06
UPF3A-205ENST00000479712 TSNAXIP1Q2TAA8 658 aa8.43□□□□□ -1.06
UPF3A-205ENST00000479712 TRIM46Q7Z4K8 759 aa8.43□□□□□ -1.06
UPF3A-205ENST00000479712 SETDB2Q96T68 719 aa8.43□□□□□ -1.06
UPF3A-205ENST00000479712 PARP2Q9UGN5 583 aa8.43□□□□□ -1.06
UPF3A-205ENST00000479712 DACH1Q9UI36 760 aa8.43□□□□□ -1.06
UPF3A-205ENST00000479712 WWC3Q9ULE0 1092 aa8.43□□□□□ -1.06
UPF3A-205ENST00000479712 GJA3Q9Y6H8 435 aa8.43□□□□□ -1.06
UPF3A-205ENST00000479712 A0A1W2PNR3 127 aa8.42□□□□□ -1.06
UPF3A-205ENST00000479712 NEFLP07196 543 aa8.42□□□□□ -1.06
UPF3A-205ENST00000479712 INPP5BP32019 993 aa8.42□□□□□ -1.06
UPF3A-205ENST00000479712 SMCPP49901 116 aaPredicted RBP8.42□□□□□ -1.06
UPF3A-205ENST00000479712 ORC1Q13415 861 aa8.42□□□□□ -1.06
UPF3A-205ENST00000479712 MRPL58Q14197 206 aaKnown RBP8.42□□□□□ -1.06
UPF3A-205ENST00000479712 ALG1LQ6GMV1 187 aa8.42□□□□□ -1.06
UPF3A-205ENST00000479712 ZFP42Q96MM3 310 aa8.42□□□□□ -1.06
UPF3A-205ENST00000479712 CSRNP1Q96S65 589 aa8.42□□□□□ -1.06
UPF3A-205ENST00000479712 GPAMQ9HCL2 828 aa8.42□□□□□ -1.06
UPF3A-205ENST00000479712 MRS2Q9HD23 443 aa8.42□□□□□ -1.06
UPF3A-205ENST00000479712 USP20Q9Y2K6 914 aa8.42□□□□□ -1.06
UPF3A-205ENST00000479712 CAMSAP1Q5T5Y3 1602 aa8.42□□□□□ -1.06
UPF3A-205ENST00000479712 ITGAEP38570 1179 aa8.41□□□□□ -1.06
UPF3A-205ENST00000479712 FAM161BQ96MY7 647 aa8.41□□□□□ -1.06
UPF3A-205ENST00000479712 FNDC3AQ9Y2H6 1198 aaKnown RBP8.41□□□□□ -1.06
UPF3A-205ENST00000479712 RTCBQ9Y3I0 505 aaKnown RBP8.41□□□□□ -1.06
UPF3A-205ENST00000479712 EIF1AYO14602 144 aaKnown RBP8.4□□□□□ -1.06
UPF3A-205ENST00000479712 WFS1O76024 890 aa8.4□□□□□ -1.06
UPF3A-205ENST00000479712 EPB42P16452 691 aa8.4□□□□□ -1.06
UPF3A-205ENST00000479712 PSMD2Q13200 908 aa8.4□□□□□ -1.06
UPF3A-205ENST00000479712 TMC4Q7Z404 712 aa8.4□□□□□ -1.06
UPF3A-205ENST00000479712 CMTR1Q8N1G2 835 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms