RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 ATP9BO43861 1147 aa6.3□□□□□ -1.4
NF1-209ENST00000479536 ATG7O95352 703 aa6.3□□□□□ -1.4
NF1-209ENST00000479536 BRD1O95696 1058 aa6.3□□□□□ -1.4
NF1-209ENST00000479536 CDCA8Q53HL2 280 aa6.3□□□□□ -1.4
NF1-209ENST00000479536 TMCO4Q5TGY1 634 aa6.3□□□□□ -1.4
NF1-209ENST00000479536 IGF2-ASQ6U949 168 aa6.3□□□□□ -1.4
NF1-209ENST00000479536 WFDC8Q8IUA0 241 aa6.3□□□□□ -1.4
NF1-209ENST00000479536 CARNS1A5YM72 827 aa6.29□□□□□ -1.4
NF1-209ENST00000479536 PPP1R12BO60237 982 aaPredicted RBP6.29□□□□□ -1.4
NF1-209ENST00000479536 KCNA1Q09470 495 aa6.29□□□□□ -1.4
NF1-209ENST00000479536 CCINQ13939 588 aa6.29□□□□□ -1.4
NF1-209ENST00000479536 CCDC102BQ68D86 513 aa6.29□□□□□ -1.4
NF1-209ENST00000479536 LPIN3Q9BQK8 851 aa6.29□□□□□ -1.4
NF1-209ENST00000479536 KIAA1024Q9UPX6 916 aa6.29□□□□□ -1.4
NF1-209ENST00000479536 USP17L5A8MUK1 530 aa6.28□□□□□ -1.4
NF1-209ENST00000479536 PLAURQ03405 335 aa6.28□□□□□ -1.4
NF1-209ENST00000479536 GRIK5Q16478 980 aa6.28□□□□□ -1.4
NF1-209ENST00000479536 POTEAQ6S8J7 498 aa6.28□□□□□ -1.4
NF1-209ENST00000479536 TRIM50Q86XT4 487 aa6.28□□□□□ -1.4
NF1-209ENST00000479536 ALDH16A1Q8IZ83 802 aa6.28□□□□□ -1.4
NF1-209ENST00000479536 NFATC2IPQ8NCF5 419 aa6.28□□□□□ -1.4
NF1-209ENST00000479536 AKTIPQ9H8T0 292 aa6.28□□□□□ -1.4
NF1-209ENST00000479536 ZBTB7BO15156 539 aaPredicted RBP6.27□□□□□ -1.41
NF1-209ENST00000479536 ALX3O95076 343 aa6.27□□□□□ -1.41
NF1-209ENST00000479536 TAL1P17542 331 aaPredicted RBP6.27□□□□□ -1.41
NF1-209ENST00000479536 CD97P48960 835 aa6.27□□□□□ -1.41
NF1-209ENST00000479536 PCSK7Q16549 785 aa6.27□□□□□ -1.41
NF1-209ENST00000479536 HIF1AQ16665 826 aa6.27□□□□□ -1.41
NF1-209ENST00000479536 PERM1Q5SV97 790 aa6.27□□□□□ -1.41
NF1-209ENST00000479536 ELMSAN1Q6PJG2 1045 aa6.27□□□□□ -1.41
NF1-209ENST00000479536 SLC51AQ86UW1 340 aa6.27□□□□□ -1.41
NF1-209ENST00000479536 NGLY1Q96IV0 654 aa6.27□□□□□ -1.41
NF1-209ENST00000479536 FRRS1LQ9P0K9 344 aa6.27□□□□□ -1.41
NF1-209ENST00000479536 TMEM88BA6NKF7 163 aa6.26□□□□□ -1.41
NF1-209ENST00000479536 DEAF1O75398 565 aaPredicted RBP6.26□□□□□ -1.41
NF1-209ENST00000479536 MFAP1P55081 439 aaKnown RBP6.26□□□□□ -1.41
NF1-209ENST00000479536 MLLT1Q03111 559 aaPredicted RBP6.26□□□□□ -1.41
NF1-209ENST00000479536 KANK4Q5T7N3 995 aaPredicted RBP6.26□□□□□ -1.41
NF1-209ENST00000479536 DZIP1LQ8IYY4 767 aaKnown RBP6.26□□□□□ -1.41
NF1-209ENST00000479536 VRTNQ9H8Y1 702 aa6.26□□□□□ -1.41
NF1-209ENST00000479536 RNF114Q9Y508 228 aa6.26□□□□□ -1.41
NF1-209ENST00000479536 OAS3Q9Y6K5 1087 aaKnown RBP6.26□□□□□ -1.41
NF1-209ENST00000479536 DLL1O00548 723 aa6.25□□□□□ -1.41
NF1-209ENST00000479536 PTCD1O75127 700 aaKnown RBP6.25□□□□□ -1.41
NF1-209ENST00000479536 MED26O95402 600 aa6.25□□□□□ -1.41
NF1-209ENST00000479536 ATP1A2P50993 1020 aa6.25□□□□□ -1.41
NF1-209ENST00000479536 GP2P55259 537 aaKnown RBP6.25□□□□□ -1.41
NF1-209ENST00000479536 CLDN10P78369 228 aa6.25□□□□□ -1.41
NF1-209ENST00000479536 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
NF1-209ENST00000479536 KRT25Q7Z3Z0 450 aa6.25□□□□□ -1.41
NF1-209ENST00000479536 TSEN2Q8NCE0 465 aaKnown RBP6.25□□□□□ -1.41
NF1-209ENST00000479536 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
NF1-209ENST00000479536 ARID1BQ8NFD5 2236 aaPredicted RBP6.24□□□□□ -1.41
NF1-209ENST00000479536 ZBTB42B2RXF5 422 aa6.24□□□□□ -1.41
NF1-209ENST00000479536 C21orf2O43822 256 aa6.24□□□□□ -1.41
NF1-209ENST00000479536 RGS22Q8NE09 1264 aa6.24□□□□□ -1.41
NF1-209ENST00000479536 CHMP7Q8WUX9 453 aaPredicted RBP6.24□□□□□ -1.41
NF1-209ENST00000479536 MRPL18Q9H0U6 180 aaKnown RBP6.24□□□□□ -1.41
NF1-209ENST00000479536 ATAD2Q6PL18 1390 aa6.23□□□□□ -1.41
NF1-209ENST00000479536 USP17L3A6NCW0 530 aa6.23□□□□□ -1.41
NF1-209ENST00000479536 USP17L4A6NCW7 530 aa6.23□□□□□ -1.41
NF1-209ENST00000479536 MAP3K6O95382 1288 aa6.23□□□□□ -1.41
NF1-209ENST00000479536 FZD5Q13467 585 aa6.23□□□□□ -1.41
NF1-209ENST00000479536 ELOAQ14241 798 aaKnown RBP6.23□□□□□ -1.41
NF1-209ENST00000479536 IER5Q5VY09 327 aa6.23□□□□□ -1.41
NF1-209ENST00000479536 USP17L2Q6R6M4 530 aa6.23□□□□□ -1.41
NF1-209ENST00000479536 DHX32Q7L7V1 743 aaKnown RBP6.23□□□□□ -1.41
NF1-209ENST00000479536 USP17L1Q7RTZ2 530 aa6.23□□□□□ -1.41
NF1-209ENST00000479536 PLEKHM2Q8IWE5 1019 aa6.23□□□□□ -1.41
NF1-209ENST00000479536 SMG9Q9H0W8 520 aaKnown RBP6.23□□□□□ -1.41
NF1-209ENST00000479536 ZFATQ9P243 1243 aa6.23□□□□□ -1.41
NF1-209ENST00000479536 RBM19Q9Y4C8 960 aaKnown RBP6.23□□□□□ -1.41
NF1-209ENST00000479536 F8W735 103 aaPredicted RBP6.22□□□□□ -1.41
NF1-209ENST00000479536 TGFBR3LH3BV60 316 aa6.22□□□□□ -1.41
NF1-209ENST00000479536 M0R2N6 131 aa6.22□□□□□ -1.41
NF1-209ENST00000479536 TGFB1P01137 390 aa6.22□□□□□ -1.41
NF1-209ENST00000479536 EPB42P16452 691 aa6.22□□□□□ -1.41
NF1-209ENST00000479536 HFE2Q6ZVN8 426 aa6.22□□□□□ -1.41
NF1-209ENST00000479536 OGFOD1Q8N543 542 aa6.22□□□□□ -1.41
NF1-209ENST00000479536 TRPM4Q8TD43 1214 aa6.22□□□□□ -1.41
NF1-209ENST00000479536 SCG3Q8WXD2 468 aaKnown RBP6.22□□□□□ -1.41
NF1-209ENST00000479536 TTC9Q92623 222 aa6.22□□□□□ -1.41
NF1-209ENST00000479536 C2orf49Q9BVC5 232 aaPredicted RBP6.22□□□□□ -1.41
NF1-209ENST00000479536 ZMIZ1Q9ULJ6 1067 aa6.22□□□□□ -1.41
NF1-209ENST00000479536 MTMR7Q9Y216 660 aa6.22□□□□□ -1.41
NF1-209ENST00000479536 RAXQ9Y2V3 346 aa6.22□□□□□ -1.41
NF1-209ENST00000479536 IVNS1ABPQ9Y6Y0 642 aa6.22□□□□□ -1.41
NF1-209ENST00000479536 KIAA1324LA8MWY0 1029 aaPredicted RBP6.21□□□□□ -1.42
NF1-209ENST00000479536 GSC2O15499 205 aa6.21□□□□□ -1.42
NF1-209ENST00000479536 IGLV1-40P01703 118 aa6.21□□□□□ -1.42
NF1-209ENST00000479536 RARAP10276 462 aa6.21□□□□□ -1.42
NF1-209ENST00000479536 GLB1P16278 677 aa6.21□□□□□ -1.42
NF1-209ENST00000479536 EIF2AK2P19525 551 aaKnown RBP6.21□□□□□ -1.42
NF1-209ENST00000479536 TARSP26639 723 aaKnown RBP6.21□□□□□ -1.42
NF1-209ENST00000479536 GRNP28799 593 aaKnown RBP6.21□□□□□ -1.42
NF1-209ENST00000479536 GPLD1P80108 840 aa6.21□□□□□ -1.42
NF1-209ENST00000479536 TMEM164Q5U3C3 297 aa6.21□□□□□ -1.42
NF1-209ENST00000479536 TMEM130Q8N3G9 435 aa6.21□□□□□ -1.42
NF1-209ENST00000479536 LARGE2Q8N3Y3 721 aa6.21□□□□□ -1.42
NF1-209ENST00000479536 STK32AQ8WU08 396 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms