RNA–Protein interactions for RNA: ENST00000478424.5

ARF1-209, Transcript of ADP ribosylation factor 1, human

TSL 2

Gene ARF1, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARF1-209	ENST00000478424	SCNN1D	P51172	638 aa		32.17	■■■□□ 2.74
ARF1-209	ENST00000478424	CNTROB	Q8N137	903 aa		32.17	■■■□□ 2.74
ARF1-209	ENST00000478424	PHAX	Q9H814	394 aa	Known RBP	32.17	■■■□□ 2.74
ARF1-209	ENST00000478424	ADAMTSL1	Q8N6G6	1762 aa		32.17	■■■□□ 2.74
ARF1-209	ENST00000478424	TMEM88B	A6NKF7	163 aa		32.16	■■■□□ 2.74
ARF1-209	ENST00000478424	ITGBL1	O95965	494 aa	Predicted RBP	32.16	■■■□□ 2.74
ARF1-209	ENST00000478424	DDX60	Q8IY21	1712 aa	Known RBP	32.16	■■■□□ 2.74
ARF1-209	ENST00000478424	LTBP1	Q14766	1721 aa		32.15	■■■□□ 2.74
ARF1-209	ENST00000478424	COL13A1	Q5TAT6	717 aa	Predicted RBP	32.15	■■■□□ 2.74
ARF1-209	ENST00000478424	ZNRF3	Q9ULT6	936 aa		32.15	■■■□□ 2.74
ARF1-209	ENST00000478424	CCDC184	Q52MB2	194 aa		32.14	■■■□□ 2.74
ARF1-209	ENST00000478424	C8orf58	Q8NAV2	365 aa		32.14	■■■□□ 2.74
ARF1-209	ENST00000478424	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.14	■■■□□ 2.74
ARF1-209	ENST00000478424	IRS4	O14654	1257 aa	Predicted RBP	32.13	■■■□□ 2.73
ARF1-209	ENST00000478424	CNTNAP1	P78357	1384 aa		32.13	■■■□□ 2.73
ARF1-209	ENST00000478424	MYD88	Q99836	296 aa		32.13	■■■□□ 2.73
ARF1-209	ENST00000478424	VPS33B	Q9H267	617 aa		32.13	■■■□□ 2.73
ARF1-209	ENST00000478424	PCNT	O95613	3336 aa		32.12	■■■□□ 2.73
ARF1-209	ENST00000478424	CXCL9	Q07325	125 aa		32.11	■■■□□ 2.73
ARF1-209	ENST00000478424	KIAA2012	Q0VF49	1180 aa		32.11	■■■□□ 2.73
ARF1-209	ENST00000478424	TMC4	Q7Z404	712 aa		32.11	■■■□□ 2.73
ARF1-209	ENST00000478424	CELF1	Q92879	486 aa	Known RBP	32.11	■■■□□ 2.73
ARF1-209	ENST00000478424	RAD17	O75943	681 aa		32.1	■■■□□ 2.73
ARF1-209	ENST00000478424	TSR2	Q969E8	191 aa	Known RBP	32.1	■■■□□ 2.73
ARF1-209	ENST00000478424	GMPS	P49915	693 aa	Predicted RBP	32.09	■■■□□ 2.73
ARF1-209	ENST00000478424	CIAPIN1	Q6FI81	312 aa		32.09	■■■□□ 2.73
ARF1-209	ENST00000478424	BCL2L13	Q9BXK5	485 aa		32.09	■■■□□ 2.73
ARF1-209	ENST00000478424	ABT1	Q9ULW3	272 aa	Known RBP	32.09	■■■□□ 2.73
ARF1-209	ENST00000478424	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.09	■■■□□ 2.73
ARF1-209	ENST00000478424	SF3B3	Q15393	1217 aa	Known RBP	32.08	■■■□□ 2.73
ARF1-209	ENST00000478424	CCDC30	Q5VVM6	783 aa		32.08	■■■□□ 2.73
ARF1-209	ENST00000478424	GPRC5D	Q9NZD1	345 aa		32.08	■■■□□ 2.73
ARF1-209	ENST00000478424	USP50	Q70EL3	339 aa	Predicted RBP	32.07	■■■□□ 2.72
ARF1-209	ENST00000478424	C6orf229	H3BNL8	230 aa		32.06	■■■□□ 2.72
ARF1-209	ENST00000478424	DDX58	O95786	925 aa	Known RBP	32.06	■■■□□ 2.72
ARF1-209	ENST00000478424	TRIM28	Q13263	835 aa	Known RBP	32.06	■■■□□ 2.72
ARF1-209	ENST00000478424	TSPYL6	Q8N831	410 aa		32.06	■■■□□ 2.72
ARF1-209	ENST00000478424	JARID2	Q92833	1246 aa	Predicted RBP	32.06	■■■□□ 2.72
ARF1-209	ENST00000478424	DUOX1	Q9NRD9	1551 aa		32.06	■■■□□ 2.72
ARF1-209	ENST00000478424	LRRC37A	A6NMS7	1700 aa		32.06	■■■□□ 2.72
ARF1-209	ENST00000478424	VEGFB	P49765	207 aa		32.05	■■■□□ 2.72
ARF1-209	ENST00000478424	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.05	■■■□□ 2.72
ARF1-209	ENST00000478424	ADARB2	Q9NS39	739 aa	Known RBP	32.05	■■■□□ 2.72
ARF1-209	ENST00000478424	RIMBP2	O15034	1052 aa		32.04	■■■□□ 2.72
ARF1-209	ENST00000478424	FMR1	Q06787	632 aa	Known RBP eCLIP	32.04	■■■□□ 2.72	5e-10	■■□□□ 13.3
ARF1-209	ENST00000478424	TNIP1	Q15025	636 aa		32.04	■■■□□ 2.72
ARF1-209	ENST00000478424	TNS4	Q8IZW8	715 aa		32.04	■■■□□ 2.72
ARF1-209	ENST00000478424	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.04	■■■□□ 2.72
ARF1-209	ENST00000478424	MRS2	Q9HD23	443 aa		32.04	■■■□□ 2.72
ARF1-209	ENST00000478424	COL4A1	P02462	1669 aa		32.04	■■■□□ 2.72
ARF1-209	ENST00000478424	GPSM2	P81274	684 aa		32.03	■■■□□ 2.72
ARF1-209	ENST00000478424	WASHC4	Q2M389	1173 aa		32.03	■■■□□ 2.72
ARF1-209	ENST00000478424	CHMP4A	Q9BY43	222 aa		32.03	■■■□□ 2.72
ARF1-209	ENST00000478424	CWC25	Q9NXE8	425 aa	Predicted RBP	32.03	■■■□□ 2.72
ARF1-209	ENST00000478424	TRAF5	O00463	557 aa		32.02	■■■□□ 2.72
ARF1-209	ENST00000478424	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.02	■■■□□ 2.72
ARF1-209	ENST00000478424	STK31	Q9BXU1	1019 aa		32.02	■■■□□ 2.72
ARF1-209	ENST00000478424	DBNDD1	Q9H9R9	158 aa		32.02	■■■□□ 2.72
ARF1-209	ENST00000478424	YDJC	A8MPS7	323 aa		32.01	■■■□□ 2.71
ARF1-209	ENST00000478424	HSP90B1	P14625	803 aa	Known RBP	32.01	■■■□□ 2.71
ARF1-209	ENST00000478424	ZEB1	P37275	1124 aa	Predicted RBP	32.01	■■■□□ 2.71
ARF1-209	ENST00000478424	CCDC191	Q8NCU4	936 aa		32.01	■■■□□ 2.71
ARF1-209	ENST00000478424	GPR101	Q96P66	508 aa	Predicted RBP	32.01	■■■□□ 2.71
ARF1-209	ENST00000478424	SEC31B	Q9NQW1	1179 aa		32.01	■■■□□ 2.71
ARF1-209	ENST00000478424	MAP3K2	Q9Y2U5	619 aa		32.01	■■■□□ 2.71
ARF1-209	ENST00000478424	CAPN15	O75808	1086 aa		32	■■■□□ 2.71
ARF1-209	ENST00000478424	RPS8	P62241	208 aa	Known RBP	32	■■■□□ 2.71
ARF1-209	ENST00000478424	METTL22	Q9BUU2	404 aa	Predicted RBP	32	■■■□□ 2.71
ARF1-209	ENST00000478424	GRM1	Q13255	1194 aa		31.99	■■■□□ 2.71
ARF1-209	ENST00000478424	DEFB115	Q30KQ5	88 aa		31.99	■■■□□ 2.71
ARF1-209	ENST00000478424	AIDA	Q96BJ3	306 aa		31.99	■■■□□ 2.71
ARF1-209	ENST00000478424	ANP32C	O43423	234 aa		31.98	■■■□□ 2.71
ARF1-209	ENST00000478424	PCCA	P05165	728 aa	Predicted RBP	31.98	■■■□□ 2.71
ARF1-209	ENST00000478424	CCDC152	Q4G0S7	254 aa		31.98	■■■□□ 2.71
ARF1-209	ENST00000478424	WWC1	Q8IX03	1113 aa		31.98	■■■□□ 2.71
ARF1-209	ENST00000478424	EYA3	Q99504	573 aa		31.98	■■■□□ 2.71
ARF1-209	ENST00000478424	POLL	Q9UGP5	575 aa		31.98	■■■□□ 2.71
ARF1-209	ENST00000478424	SALL2	Q9Y467	1007 aa	Predicted RBP	31.98	■■■□□ 2.71
ARF1-209	ENST00000478424	ZBTB12	Q9Y330	459 aa	Predicted RBP	31.97	■■■□□ 2.71
ARF1-209	ENST00000478424	SHTN1	A0MZ66	631 aa		31.96	■■■□□ 2.71
ARF1-209	ENST00000478424	PDE8A	O60658	829 aa		31.96	■■■□□ 2.71
ARF1-209	ENST00000478424	DOK7	Q18PE1	504 aa		31.96	■■■□□ 2.71
ARF1-209	ENST00000478424	TWISTNB	Q3B726	338 aa	Predicted RBP	31.96	■■■□□ 2.71
ARF1-209	ENST00000478424	ANKIB1	Q9P2G1	1089 aa		31.96	■■■□□ 2.71
ARF1-209	ENST00000478424	CDHR2	Q9BYE9	1310 aa		31.96	■■■□□ 2.71
ARF1-209	ENST00000478424	PI4KAP2	A4QPH2	592 aa		31.95	■■■□□ 2.71
ARF1-209	ENST00000478424	RASSF10	A6NK89	507 aa		31.95	■■■□□ 2.71
ARF1-209	ENST00000478424	FOXN1	O15353	648 aa		31.95	■■■□□ 2.71
ARF1-209	ENST00000478424	UFL1	O94874	794 aa		31.95	■■■□□ 2.71
ARF1-209	ENST00000478424	MICALL2	Q8IY33	904 aa		31.95	■■■□□ 2.71
ARF1-209	ENST00000478424	PI4KAP1	Q8N8J0	262 aa		31.95	■■■□□ 2.71
ARF1-209	ENST00000478424	TRPM4	Q8TD43	1214 aa		31.95	■■■□□ 2.71
ARF1-209	ENST00000478424	CNOT7	Q9UIV1	285 aa	Known RBP	31.95	■■■□□ 2.71
ARF1-209	ENST00000478424		G3V3G9	751 aa		31.94	■■■□□ 2.7
ARF1-209	ENST00000478424	PSMD14	O00487	310 aa		31.94	■■■□□ 2.7
ARF1-209	ENST00000478424	ECE2	O60344	883 aa		31.94	■■■□□ 2.7
ARF1-209	ENST00000478424	NEXN	Q0ZGT2	675 aa		31.94	■■■□□ 2.7
ARF1-209	ENST00000478424	CCDC27	Q2M243	656 aa		31.94	■■■□□ 2.7
ARF1-209	ENST00000478424	DCAF8	Q5TAQ9	597 aa		31.94	■■■□□ 2.7
ARF1-209	ENST00000478424	KSR2	Q6VAB6	950 aa		31.94	■■■□□ 2.7

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