RNA–Protein interactions for RNA: ENST00000477141.1

RPL39P34-201, Transcript of ribosomal protein L39 pseudogene 34, humanhuman

BASIC

Gene RPL39P34, Length 156 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P34-201ENST00000477141 FAM83CQ9BQN1 747 aa3.26□□□□□ -1.89
RPL39P34-201ENST00000477141 GSX2Q9BZM3 304 aa3.26□□□□□ -1.89
RPL39P34-201ENST00000477141 SLC24A3Q9HC58 644 aa3.26□□□□□ -1.89
RPL39P34-201ENST00000477141 RAPGEFL1Q9UHV5 662 aa3.26□□□□□ -1.89
RPL39P34-201ENST00000477141 SERTM1A2A2V5 107 aa3.25□□□□□ -1.89
RPL39P34-201ENST00000477141 GRNP28799 593 aaKnown RBP3.25□□□□□ -1.89
RPL39P34-201ENST00000477141 GPLD1P80108 840 aa3.25□□□□□ -1.89
RPL39P34-201ENST00000477141 CCINQ13939 588 aa3.25□□□□□ -1.89
RPL39P34-201ENST00000477141 SETDB1Q15047 1291 aa3.25□□□□□ -1.89
RPL39P34-201ENST00000477141 CPSF6Q16630 551 aaKnown RBP eCLIP3.25□□□□□ -1.89
RPL39P34-201ENST00000477141 SH3PXD2AQ5TCZ1 1133 aa3.25□□□□□ -1.89
RPL39P34-201ENST00000477141 ZNF280CQ8ND82 737 aa3.25□□□□□ -1.89
RPL39P34-201ENST00000477141 TRPM4Q8TD43 1214 aa3.25□□□□□ -1.89
RPL39P34-201ENST00000477141 SUSD3Q96L08 255 aa3.25□□□□□ -1.89
RPL39P34-201ENST00000477141 SLC38A3Q99624 504 aa3.25□□□□□ -1.89
RPL39P34-201ENST00000477141 SMG9Q9H0W8 520 aaKnown RBP3.25□□□□□ -1.89
RPL39P34-201ENST00000477141 BIN1O00499 593 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 MAP3K6O95382 1288 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 FOSL1P15407 271 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 HIRAP54198 1017 aaPredicted RBP3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 EPHA4P54764 986 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 MAP7D1Q3KQU3 841 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 BTLAQ7Z6A9 289 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 CILP2Q8IUL8 1156 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 SLC9A9Q8IVB4 645 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 FAM20CQ8IXL6 584 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 BHLHE22Q8NFJ8 381 aaPredicted RBP3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 GIMAP7Q8NHV1 300 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 TOX2Q96NM4 488 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 FAM117AQ9C073 453 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 LEMD3Q9Y2U8 911 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 NDUFB9Q9Y6M9 179 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 CARMIL2Q6F5E8 1435 aa3.24□□□□□ -1.89
RPL39P34-201ENST00000477141 ZBTB42B2RXF5 422 aa3.23□□□□□ -1.89
RPL39P34-201ENST00000477141 POTEAQ6S8J7 498 aa3.23□□□□□ -1.89
RPL39P34-201ENST00000477141 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.23□□□□□ -1.89
RPL39P34-201ENST00000477141 BEND4Q6ZU67 534 aa3.23□□□□□ -1.89
RPL39P34-201ENST00000477141 ACAD11Q709F0 780 aa3.23□□□□□ -1.89
RPL39P34-201ENST00000477141 DHX32Q7L7V1 743 aaKnown RBP3.23□□□□□ -1.89
RPL39P34-201ENST00000477141 FLCNQ8NFG4 579 aa3.23□□□□□ -1.89
RPL39P34-201ENST00000477141 DDRGK1Q96HY6 314 aa3.23□□□□□ -1.89
RPL39P34-201ENST00000477141 CSRNP1Q96S65 589 aa3.23□□□□□ -1.89
RPL39P34-201ENST00000477141 WISP1O95388 367 aa3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 PSMA6P60900 246 aaKnown RBP3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 EIF4G2P78344 907 aaKnown RBP eCLIP3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 MLLT1Q03111 559 aaPredicted RBP3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 HIF1AQ16665 826 aa3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 TMEM132AQ24JP5 1023 aa3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 LCNL1Q6ZST4 164 aa3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 TTLL10Q6ZVT0 673 aa3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 SIAH1Q8IUQ4 282 aa3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 ZSCAN18Q8TBC5 510 aaPredicted RBP3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 MFSD14AQ96MC6 490 aa3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 PHACTR1Q9C0D0 580 aa3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 KCNF1Q9H3M0 494 aa3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 PAK6Q9NQU5 681 aaPredicted RBP3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 ATG3Q9NT62 314 aa3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 ZNF358Q9NW07 568 aa3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 BSDC1Q9NW68 430 aaPredicted RBP3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 HIF3AQ9Y2N7 669 aa3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 PCDHGA11Q9Y5H2 935 aa3.22□□□□□ -1.89
RPL39P34-201ENST00000477141 BMP3P12645 472 aa3.21□□□□□ -1.9
RPL39P34-201ENST00000477141 EIF2AK2P19525 551 aaKnown RBP3.21□□□□□ -1.9
RPL39P34-201ENST00000477141 TBCELQ5QJ74 424 aa3.21□□□□□ -1.9
RPL39P34-201ENST00000477141 IER5Q5VY09 327 aa3.21□□□□□ -1.9
RPL39P34-201ENST00000477141 C1QL4Q86Z23 238 aa3.21□□□□□ -1.9
RPL39P34-201ENST00000477141 IL22RA1Q8N6P7 574 aa3.21□□□□□ -1.9
RPL39P34-201ENST00000477141 PLPP7Q8NBV4 271 aa3.21□□□□□ -1.9
RPL39P34-201ENST00000477141 OSBPL1AQ9BXW6 950 aa3.21□□□□□ -1.9
RPL39P34-201ENST00000477141 MUC3BQ9H195 1237 aa3.21□□□□□ -1.9
RPL39P34-201ENST00000477141 LMCD1Q9NZU5 365 aa3.21□□□□□ -1.9
RPL39P34-201ENST00000477141 CHMP3Q9Y3E7 222 aa3.21□□□□□ -1.9
RPL39P34-201ENST00000477141 F13BP05160 661 aa3.2□□□□□ -1.9
RPL39P34-201ENST00000477141 CFPP27918 469 aa3.2□□□□□ -1.9
RPL39P34-201ENST00000477141 ARID4AP29374 1257 aaPredicted RBP3.2□□□□□ -1.9
RPL39P34-201ENST00000477141 NRLP54845 237 aa3.2□□□□□ -1.9
RPL39P34-201ENST00000477141 GDF6Q6KF10 455 aaPredicted RBP3.2□□□□□ -1.9
RPL39P34-201ENST00000477141 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.2□□□□□ -1.9
RPL39P34-201ENST00000477141 TMEM40Q8WWA1 233 aa3.2□□□□□ -1.9
RPL39P34-201ENST00000477141 FAM168AQ92567 244 aa3.2□□□□□ -1.9
RPL39P34-201ENST00000477141 PLD4Q96BZ4 506 aa3.2□□□□□ -1.9
RPL39P34-201ENST00000477141 FAM84AQ96KN4 292 aa3.2□□□□□ -1.9
RPL39P34-201ENST00000477141 METTL22Q9BUU2 404 aaPredicted RBP3.2□□□□□ -1.9
RPL39P34-201ENST00000477141 ZFATQ9P243 1243 aa3.2□□□□□ -1.9
RPL39P34-201ENST00000477141 HCN4Q9Y3Q4 1203 aa3.2□□□□□ -1.9
RPL39P34-201ENST00000477141 SART1O43290 800 aaKnown RBP3.19□□□□□ -1.9
RPL39P34-201ENST00000477141 EPB42P16452 691 aa3.19□□□□□ -1.9
RPL39P34-201ENST00000477141 CD68P34810 354 aaPredicted RBP3.19□□□□□ -1.9
RPL39P34-201ENST00000477141 KRTAP1-1Q07627 177 aa3.19□□□□□ -1.9
RPL39P34-201ENST00000477141 MESP2Q0VG99 397 aa3.19□□□□□ -1.9
RPL39P34-201ENST00000477141 KIAA1211Q6ZU35 1233 aa3.19□□□□□ -1.9
RPL39P34-201ENST00000477141 CACTIN-AS1Q8N1I8 211 aa3.19□□□□□ -1.9
RPL39P34-201ENST00000477141 GALNT11Q8NCW6 608 aa3.19□□□□□ -1.9
RPL39P34-201ENST00000477141 GPBP1L1Q9HC44 474 aaPredicted RBP3.19□□□□□ -1.9
RPL39P34-201ENST00000477141 APBB1O00213 710 aa3.18□□□□□ -1.9
RPL39P34-201ENST00000477141 ZSCAN22P10073 491 aaPredicted RBP3.18□□□□□ -1.9
RPL39P34-201ENST00000477141 RARAP10276 462 aa3.18□□□□□ -1.9
RPL39P34-201ENST00000477141 RAP1GAPP47736 663 aa3.18□□□□□ -1.9
RPL39P34-201ENST00000477141 PREPP48147 710 aa3.18□□□□□ -1.9
RPL39P34-201ENST00000477141 ANKRD34AQ69YU3 496 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms