RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 GIPC1O14908 333 aa6.21□□□□□ -1.42
VPS13D-207ENST00000476169 AXIN1O15169 862 aa6.21□□□□□ -1.42
VPS13D-207ENST00000476169 SMCPP49901 116 aaPredicted RBP6.21□□□□□ -1.42
VPS13D-207ENST00000476169 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.21□□□□□ -1.42
VPS13D-207ENST00000476169 PKDCCQ504Y2 493 aa6.21□□□□□ -1.42
VPS13D-207ENST00000476169 SAMD5Q5TGI4 173 aa6.21□□□□□ -1.42
VPS13D-207ENST00000476169 METTL16Q86W50 562 aaKnown RBP6.21□□□□□ -1.42
VPS13D-207ENST00000476169 C12orf49Q9H741 205 aa6.21□□□□□ -1.42
VPS13D-207ENST00000476169 MAN1A2O60476 641 aa6.2□□□□□ -1.42
VPS13D-207ENST00000476169 DGAT1O75907 488 aa6.2□□□□□ -1.42
VPS13D-207ENST00000476169 POLR3DP05423 398 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-207ENST00000476169 CTSHP09668 335 aa6.2□□□□□ -1.42
VPS13D-207ENST00000476169 TTC39BQ5VTQ0 682 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-207ENST00000476169 NLRP13Q86W25 1043 aa6.2□□□□□ -1.42
VPS13D-207ENST00000476169 SPATA32Q96LK8 384 aa6.2□□□□□ -1.42
VPS13D-207ENST00000476169 ZCCHC2Q9C0B9 1178 aaKnown RBP6.2□□□□□ -1.42
VPS13D-207ENST00000476169 NPHS2Q9NP85 383 aa6.2□□□□□ -1.42
VPS13D-207ENST00000476169 ABI2Q9NYB9 513 aaPredicted RBP6.2□□□□□ -1.42
VPS13D-207ENST00000476169 CNTN3Q9P232 1028 aa6.2□□□□□ -1.42
VPS13D-207ENST00000476169 EREGO14944 169 aa6.19□□□□□ -1.42
VPS13D-207ENST00000476169 GADD45BO75293 160 aaPredicted RBP6.19□□□□□ -1.42
VPS13D-207ENST00000476169 EGFRP00533 1210 aa6.19□□□□□ -1.42
VPS13D-207ENST00000476169 RAD51AP2Q09MP3 1159 aa6.19□□□□□ -1.42
VPS13D-207ENST00000476169 FIGNL1Q6PIW4 674 aa6.19□□□□□ -1.42
VPS13D-207ENST00000476169 RIPOR1Q6ZS17 1223 aa6.19□□□□□ -1.42
VPS13D-207ENST00000476169 GALNT12Q8IXK2 581 aa6.19□□□□□ -1.42
VPS13D-207ENST00000476169 C1orf127Q8N9H9 656 aa6.19□□□□□ -1.42
VPS13D-207ENST00000476169 PMEPA1Q969W9 287 aa6.19□□□□□ -1.42
VPS13D-207ENST00000476169 OSBPL7Q9BZF2 842 aa6.19□□□□□ -1.42
VPS13D-207ENST00000476169 CHRDQ9H2X0 955 aa6.19□□□□□ -1.42
VPS13D-207ENST00000476169 CCSER2Q9H7U1 834 aa6.19□□□□□ -1.42
VPS13D-207ENST00000476169 C11orf16Q9NQ32 467 aa6.19□□□□□ -1.42
VPS13D-207ENST00000476169 KCNH4Q9UQ05 1017 aa6.19□□□□□ -1.42
VPS13D-207ENST00000476169 ATXN7O15265 892 aaPredicted RBP6.18□□□□□ -1.42
VPS13D-207ENST00000476169 CES1P23141 567 aa6.18□□□□□ -1.42
VPS13D-207ENST00000476169 LBRQ14739 615 aaKnown RBP6.18□□□□□ -1.42
VPS13D-207ENST00000476169 CHMP4AQ9BY43 222 aa6.18□□□□□ -1.42
VPS13D-207ENST00000476169 TGIF2Q9GZN2 237 aa6.18□□□□□ -1.42
VPS13D-207ENST00000476169 FAM8A1Q9UBU6 413 aa6.18□□□□□ -1.42
VPS13D-207ENST00000476169 SENP3-EIF4A1A0A087X0R7 540 aa6.17□□□□□ -1.42
VPS13D-207ENST00000476169 SASH3O75995 380 aa6.17□□□□□ -1.42
VPS13D-207ENST00000476169 USP17L7P0C7H9 530 aa6.17□□□□□ -1.42
VPS13D-207ENST00000476169 FAM157BP0CG42 384 aa6.17□□□□□ -1.42
VPS13D-207ENST00000476169 NCLP19338 710 aaKnown RBP6.17□□□□□ -1.42
VPS13D-207ENST00000476169 KCNQ4P56696 695 aa6.17□□□□□ -1.42
VPS13D-207ENST00000476169 SFSWAPQ12872 951 aaKnown RBP6.17□□□□□ -1.42
VPS13D-207ENST00000476169 CCINQ13939 588 aa6.17□□□□□ -1.42
VPS13D-207ENST00000476169 KRT25Q7Z3Z0 450 aa6.17□□□□□ -1.42
VPS13D-207ENST00000476169 CRIPAKQ8N1N5 446 aa6.17□□□□□ -1.42
VPS13D-207ENST00000476169 BCO2Q9BYV7 579 aa6.17□□□□□ -1.42
VPS13D-207ENST00000476169 SRCIN1Q9C0H9 1055 aa6.17□□□□□ -1.42
VPS13D-207ENST00000476169 PCDHGC4Q9Y5F7 938 aa6.17□□□□□ -1.42
VPS13D-207ENST00000476169 DCDC2BA2VCK2 349 aa6.16□□□□□ -1.42
VPS13D-207ENST00000476169 NRG2O14511 850 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-207ENST00000476169 KHNYNO15037 678 aaKnown RBP6.16□□□□□ -1.42
VPS13D-207ENST00000476169 GFRA3O60609 400 aa6.16□□□□□ -1.42
VPS13D-207ENST00000476169 EIF5BO60841 1220 aaKnown RBP6.16□□□□□ -1.42
VPS13D-207ENST00000476169 NXPE4Q6UWF7 544 aa6.16□□□□□ -1.42
VPS13D-207ENST00000476169 NUCKS1Q9H1E3 243 aaKnown RBP6.16□□□□□ -1.42
VPS13D-207ENST00000476169 SUV39H2Q9H5I1 410 aa6.16□□□□□ -1.42
VPS13D-207ENST00000476169 ATP13A2Q9NQ11 1180 aa6.16□□□□□ -1.42
VPS13D-207ENST00000476169 KANSL3Q9P2N6 904 aa6.16□□□□□ -1.42
VPS13D-207ENST00000476169 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.16□□□□□ -1.42
VPS13D-207ENST00000476169 SOBPA7XYQ1 873 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 PHF20L1A8MW92 1017 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 EFSO43281 561 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 CYP2E1P05181 493 aaPredicted RBP6.15□□□□□ -1.42
VPS13D-207ENST00000476169 RARAP10276 462 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 EDN3P14138 238 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 TARSP26639 723 aaKnown RBP6.15□□□□□ -1.42
VPS13D-207ENST00000476169 PTSQ03393 145 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 GRM2Q14416 872 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 TAF1CQ15572 869 aaPredicted RBP6.15□□□□□ -1.42
VPS13D-207ENST00000476169 MEI1Q5TIA1 1274 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 HS2ST1Q7LGA3 356 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 PNMA5Q96PV4 448 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 POLR3GLQ9BT43 218 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 GSX2Q9BZM3 304 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 ACBD3Q9H3P7 528 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 CAPN10Q9HC96 672 aa6.15□□□□□ -1.42
VPS13D-207ENST00000476169 USP31Q70CQ4 1352 aa6.15□□□□□ -1.43
VPS13D-207ENST00000476169 A0A1W2PP55 124 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 H7C1W4 665 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 ST8SIA5O15466 376 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 MMP20O60882 483 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 THBS1P07996 1170 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 GSTT1P30711 240 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 VEGFBP49765 207 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 TNP2Q05952 138 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 LAMC2Q13753 1193 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 OR13H1Q8NG92 308 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 TINF2Q9BSI4 451 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 EHD4Q9H223 541 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 LATS2Q9NRM7 1088 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 PPP4R2Q9NY27 417 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 GGT7Q9UJ14 662 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 TRAK1Q9UPV9 953 aa6.14□□□□□ -1.43
VPS13D-207ENST00000476169 SLC35F4A4IF30 521 aa6.13□□□□□ -1.43
VPS13D-207ENST00000476169 ANKRD62A6NC57 917 aa6.13□□□□□ -1.43
VPS13D-207ENST00000476169 MAPTP10636 758 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 1545.4 ms