RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	SLC6A14	Q9UN76	642 aa		9.25	□□□□□ -0.93
PRKD3-208	ENST00000475912	XYLB	O75191	536 aa		9.24	□□□□□ -0.93
PRKD3-208	ENST00000475912	RARA	P10276	462 aa		9.24	□□□□□ -0.93
PRKD3-208	ENST00000475912	SSFA2	P28290	1259 aa		9.24	□□□□□ -0.93
PRKD3-208	ENST00000475912	TRIM11	Q96F44	468 aa		9.24	□□□□□ -0.93
PRKD3-208	ENST00000475912	STIM2	Q9P246	746 aa		9.24	□□□□□ -0.93
PRKD3-208	ENST00000475912	KCNMB2	Q9Y691	235 aa		9.24	□□□□□ -0.93
PRKD3-208	ENST00000475912	MICALL1	Q8N3F8	863 aa		9.23	□□□□□ -0.93
PRKD3-208	ENST00000475912	C11orf16	Q9NQ32	467 aa		9.23	□□□□□ -0.93
PRKD3-208	ENST00000475912	ZBTB39	O15060	712 aa		9.22	□□□□□ -0.93
PRKD3-208	ENST00000475912	MAP3K6	O95382	1288 aa		9.22	□□□□□ -0.93
PRKD3-208	ENST00000475912	ZAP70	P43403	619 aa		9.22	□□□□□ -0.93
PRKD3-208	ENST00000475912	TRIP4	Q15650	581 aa	Predicted RBP	9.22	□□□□□ -0.93
PRKD3-208	ENST00000475912	C20orf204	Q6ZNR8	217 aa		9.22	□□□□□ -0.93
PRKD3-208	ENST00000475912	DHX32	Q7L7V1	743 aa	Known RBP	9.22	□□□□□ -0.93
PRKD3-208	ENST00000475912	PLVAP	Q9BX97	442 aa		9.22	□□□□□ -0.93
PRKD3-208	ENST00000475912	NOP53	Q9NZM5	478 aa	Known RBP	9.22	□□□□□ -0.93
PRKD3-208	ENST00000475912	NAGPA	Q9UK23	515 aa		9.22	□□□□□ -0.93
PRKD3-208	ENST00000475912	KRBA1	A5PL33	1030 aa		9.21	□□□□□ -0.94
PRKD3-208	ENST00000475912	EGFR	P00533	1210 aa		9.21	□□□□□ -0.94
PRKD3-208	ENST00000475912	PLA2G4E	Q3MJ16	856 aa		9.21	□□□□□ -0.94
PRKD3-208	ENST00000475912	GPAT2	Q6NUI2	795 aa		9.21	□□□□□ -0.94
PRKD3-208	ENST00000475912	ABTB2	Q8N961	1025 aa		9.21	□□□□□ -0.94
PRKD3-208	ENST00000475912	ITGB2	P05107	769 aa		9.2	□□□□□ -0.94
PRKD3-208	ENST00000475912	MLLT1	Q03111	559 aa	Predicted RBP	9.2	□□□□□ -0.94
PRKD3-208	ENST00000475912	COL9A3	Q14050	684 aa	Predicted RBP	9.2	□□□□□ -0.94
PRKD3-208	ENST00000475912	PHLDB3	Q6NSJ2	640 aa		9.2	□□□□□ -0.94
PRKD3-208	ENST00000475912	HELQ	Q8TDG4	1101 aa		9.2	□□□□□ -0.94
PRKD3-208	ENST00000475912	NUDT8	Q8WV74	236 aa		9.2	□□□□□ -0.94
PRKD3-208	ENST00000475912	PRDM6	Q9NQX0	595 aa		9.2	□□□□□ -0.94
PRKD3-208	ENST00000475912	ZBTB42	B2RXF5	422 aa		9.19	□□□□□ -0.94
PRKD3-208	ENST00000475912	PSAPL1	Q6NUJ1	521 aa		9.19	□□□□□ -0.94
PRKD3-208	ENST00000475912	ALYREF	Q86V81	257 aa	Known RBP	9.19	□□□□□ -0.94
PRKD3-208	ENST00000475912	GPR152	Q8TDT2	470 aa		9.19	□□□□□ -0.94
PRKD3-208	ENST00000475912	GTF3C2	Q8WUA4	911 aa	Predicted RBP	9.19	□□□□□ -0.94
PRKD3-208	ENST00000475912	PIK3R5	Q8WYR1	880 aa		9.19	□□□□□ -0.94
PRKD3-208	ENST00000475912	JPH1	Q9HDC5	661 aa	Predicted RBP	9.19	□□□□□ -0.94
PRKD3-208	ENST00000475912	FAM13B	Q9NYF5	915 aa		9.19	□□□□□ -0.94
PRKD3-208	ENST00000475912	UBAP1L	F5GYI3	381 aa		9.18	□□□□□ -0.94
PRKD3-208	ENST00000475912	LILRB5	O75023	590 aa		9.18	□□□□□ -0.94
PRKD3-208	ENST00000475912	IGHA1	P01876	353 aa		9.18	□□□□□ -0.94
PRKD3-208	ENST00000475912	CPB1	P15086	417 aa		9.18	□□□□□ -0.94
PRKD3-208	ENST00000475912	FAM35A	Q86V20	835 aa		9.18	□□□□□ -0.94
PRKD3-208	ENST00000475912	ATCAY	Q86WG3	371 aa		9.18	□□□□□ -0.94
PRKD3-208	ENST00000475912	UST	Q9Y2C2	406 aa		9.18	□□□□□ -0.94
PRKD3-208	ENST00000475912	MMP20	O60882	483 aa		9.17	□□□□□ -0.94
PRKD3-208	ENST00000475912	NID1	P14543	1247 aa		9.17	□□□□□ -0.94
PRKD3-208	ENST00000475912	GPLD1	P80108	840 aa		9.17	□□□□□ -0.94
PRKD3-208	ENST00000475912	MTMR3	Q13615	1198 aa		9.17	□□□□□ -0.94
PRKD3-208	ENST00000475912	PCSK7	Q16549	785 aa		9.17	□□□□□ -0.94
PRKD3-208	ENST00000475912	HFE2	Q6ZVN8	426 aa		9.17	□□□□□ -0.94
PRKD3-208	ENST00000475912	TRPM4	Q8TD43	1214 aa		9.17	□□□□□ -0.94
PRKD3-208	ENST00000475912	TLR7	Q9NYK1	1049 aa	Known RBP	9.17	□□□□□ -0.94
PRKD3-208	ENST00000475912	NACAD	O15069	1562 aa		9.16	□□□□□ -0.94
PRKD3-208	ENST00000475912	NLRP13	Q86W25	1043 aa		9.16	□□□□□ -0.94
PRKD3-208	ENST00000475912	FAM229A	H3BQW9	127 aa		9.15	□□□□□ -0.94
PRKD3-208	ENST00000475912	PSAP	P07602	524 aa		9.15	□□□□□ -0.94
PRKD3-208	ENST00000475912	MPST	P25325	297 aa		9.15	□□□□□ -0.94
PRKD3-208	ENST00000475912	ARID4A	P29374	1257 aa	Predicted RBP	9.15	□□□□□ -0.94
PRKD3-208	ENST00000475912	NRL	P54845	237 aa		9.15	□□□□□ -0.94
PRKD3-208	ENST00000475912	PERM1	Q5SV97	790 aa		9.15	□□□□□ -0.94
PRKD3-208	ENST00000475912	LPIN3	Q9BQK8	851 aa		9.15	□□□□□ -0.94
PRKD3-208	ENST00000475912	SPDYE3	A6NKU9	549 aa		9.14	□□□□□ -0.95
PRKD3-208	ENST00000475912	RGS9	O75916	674 aa	Predicted RBP	9.14	□□□□□ -0.95
PRKD3-208	ENST00000475912	AFF1	P51825	1210 aa	Known RBP	9.14	□□□□□ -0.95
PRKD3-208	ENST00000475912	PLAUR	Q03405	335 aa		9.14	□□□□□ -0.95
PRKD3-208	ENST00000475912	RETREG2	Q8NC44	543 aa		9.14	□□□□□ -0.95
PRKD3-208	ENST00000475912	NSUN5	Q96P11	429 aa	Known RBP	9.14	□□□□□ -0.95
PRKD3-208	ENST00000475912	EIF2AK2	P19525	551 aa	Known RBP	9.13	□□□□□ -0.95
PRKD3-208	ENST00000475912	NOM1	Q5C9Z4	860 aa	Known RBP	9.13	□□□□□ -0.95
PRKD3-208	ENST00000475912	ELMSAN1	Q6PJG2	1045 aa		9.13	□□□□□ -0.95
PRKD3-208	ENST00000475912	EDEM1	Q92611	657 aa		9.13	□□□□□ -0.95
PRKD3-208	ENST00000475912	NUDT16	Q96DE0	195 aa	Known RBP	9.13	□□□□□ -0.95
PRKD3-208	ENST00000475912	SPOCK3	Q9BQ16	436 aa		9.13	□□□□□ -0.95
PRKD3-208	ENST00000475912	FNDC3A	Q9Y2H6	1198 aa	Known RBP	9.13	□□□□□ -0.95
PRKD3-208	ENST00000475912	BICRA	Q9NZM4	1560 aa		9.12	□□□□□ -0.95
PRKD3-208	ENST00000475912		J3QW42	95 aa		9.12	□□□□□ -0.95
PRKD3-208	ENST00000475912	MSTN	O14793	375 aa		9.12	□□□□□ -0.95
PRKD3-208	ENST00000475912	ABL1	P00519	1130 aa		9.12	□□□□□ -0.95
PRKD3-208	ENST00000475912	SPATA31C1	P0DKV0	1188 aa		9.12	□□□□□ -0.95
PRKD3-208	ENST00000475912	CHRNA4	P43681	627 aa		9.12	□□□□□ -0.95
PRKD3-208	ENST00000475912	EIF1AX	P47813	144 aa	Known RBP	9.12	□□□□□ -0.95
PRKD3-208	ENST00000475912	PRRT3	Q5FWE3	981 aa		9.12	□□□□□ -0.95
PRKD3-208	ENST00000475912	TRAPPC3L	Q5T215	181 aa		9.12	□□□□□ -0.95
PRKD3-208	ENST00000475912	ANO2	Q9NQ90	1003 aa		9.12	□□□□□ -0.95
PRKD3-208	ENST00000475912	FRRS1L	Q9P0K9	344 aa		9.12	□□□□□ -0.95
PRKD3-208	ENST00000475912	MTMR7	Q9Y216	660 aa		9.12	□□□□□ -0.95
PRKD3-208	ENST00000475912	LOC102724428	A0A0B4J2F2	783 aa		9.11	□□□□□ -0.95
PRKD3-208	ENST00000475912	C1QTNF9B	B2RNN3	333 aa		9.11	□□□□□ -0.95
PRKD3-208	ENST00000475912	PROC	P04070	461 aa		9.11	□□□□□ -0.95
PRKD3-208	ENST00000475912	SOX18	P35713	384 aa		9.11	□□□□□ -0.95
PRKD3-208	ENST00000475912	SIK1	P57059	783 aa		9.11	□□□□□ -0.95
PRKD3-208	ENST00000475912	DNM1	Q05193	864 aa	Known RBP	9.11	□□□□□ -0.95
PRKD3-208	ENST00000475912	ZNF211	Q13398	564 aa	Predicted RBP	9.11	□□□□□ -0.95
PRKD3-208	ENST00000475912	CD163	Q86VB7	1156 aa		9.11	□□□□□ -0.95
PRKD3-208	ENST00000475912	SMG9	Q9H0W8	520 aa	Known RBP	9.11	□□□□□ -0.95
PRKD3-208	ENST00000475912	UNC13A	Q9UPW8	1703 aa		9.11	□□□□□ -0.95
PRKD3-208	ENST00000475912	TRIM28	Q13263	835 aa	Known RBP	9.1	□□□□□ -0.95
PRKD3-208	ENST00000475912	GRIK5	Q16478	980 aa		9.1	□□□□□ -0.95
PRKD3-208	ENST00000475912	OR13H1	Q8NG92	308 aa		9.1	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms