RNA–Protein interactions for RNA: ENST00000475346.1

RPSA-205, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-205ENST00000475346 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.52□□□□□ -1.21
RPSA-205ENST00000475346 USPL1Q5W0Q7 1092 aa7.52□□□□□ -1.21
RPSA-205ENST00000475346 CWC22Q9HCG8 908 aaKnown RBP7.52□□□□□ -1.21
RPSA-205ENST00000475346 USP31Q70CQ4 1352 aa7.51□□□□□ -1.21
RPSA-205ENST00000475346 PAK2Q13177 524 aa7.51□□□□□ -1.21
RPSA-205ENST00000475346 NLGN1Q8N2Q7 840 aa7.51□□□□□ -1.21
RPSA-205ENST00000475346 EPS8L3Q8TE67 593 aaKnown RBP7.51□□□□□ -1.21
RPSA-205ENST00000475346 OSBPL7Q9BZF2 842 aa7.51□□□□□ -1.21
RPSA-205ENST00000475346 FOXD3Q9UJU5 478 aaPredicted RBP7.51□□□□□ -1.21
RPSA-205ENST00000475346 CENPCQ03188 943 aa7.5□□□□□ -1.21
RPSA-205ENST00000475346 CLN3Q13286 438 aa7.5□□□□□ -1.21
RPSA-205ENST00000475346 TAF1CQ15572 869 aaPredicted RBP7.5□□□□□ -1.21
RPSA-205ENST00000475346 EGFLAMQ63HQ2 1017 aa7.5□□□□□ -1.21
RPSA-205ENST00000475346 PRICKLE2Q7Z3G6 844 aa7.5□□□□□ -1.21
RPSA-205ENST00000475346 KDF1Q8NAX2 398 aaPredicted RBP7.5□□□□□ -1.21
RPSA-205ENST00000475346 HRH3Q9Y5N1 445 aa7.5□□□□□ -1.21
RPSA-205ENST00000475346 RPLP1P05386 114 aaKnown RBP7.49□□□□□ -1.21
RPSA-205ENST00000475346 USP17L7P0C7H9 530 aa7.49□□□□□ -1.21
RPSA-205ENST00000475346 RHOQP17081 205 aa7.49□□□□□ -1.21
RPSA-205ENST00000475346 ATF4P18848 351 aaPredicted RBP7.49□□□□□ -1.21
RPSA-205ENST00000475346 GJA8P48165 433 aa7.49□□□□□ -1.21
RPSA-205ENST00000475346 PTSQ03393 145 aa7.49□□□□□ -1.21
RPSA-205ENST00000475346 JAZF1Q86VZ6 243 aa7.49□□□□□ -1.21
RPSA-205ENST00000475346 ZNF295-AS1Q8N0V1 137 aa7.49□□□□□ -1.21
RPSA-205ENST00000475346 RNF217Q8TC41 542 aa7.49□□□□□ -1.21
RPSA-205ENST00000475346 CCDC74AQ96AQ1 378 aa7.49□□□□□ -1.21
RPSA-205ENST00000475346 GPRASP2Q96D09 838 aa7.49□□□□□ -1.21
RPSA-205ENST00000475346 NLRP3Q96P20 1036 aa7.49□□□□□ -1.21
RPSA-205ENST00000475346 FHDC1Q9C0D6 1143 aaPredicted RBP7.49□□□□□ -1.21
RPSA-205ENST00000475346 FAM13BQ9NYF5 915 aa7.49□□□□□ -1.21
RPSA-205ENST00000475346 BCS1LQ9Y276 419 aa7.49□□□□□ -1.21
RPSA-205ENST00000475346 H3BM21 787 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 GIPC1O14908 333 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 PPFIA3O75145 1194 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 MICAL2O94851 1124 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 TXLNAP40222 546 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 SLC27A3Q5K4L6 730 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 LCE2CQ5TA81 110 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 ZNF746Q6NUN9 644 aaPredicted RBP7.48□□□□□ -1.21
RPSA-205ENST00000475346 TMEM214Q6NUQ4 689 aaKnown RBP7.48□□□□□ -1.21
RPSA-205ENST00000475346 IRF7Q92985 503 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 SPACA7Q96KW9 195 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 POLR3GLQ9BT43 218 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 NIFKQ9BYG3 293 aaKnown RBP7.48□□□□□ -1.21
RPSA-205ENST00000475346 NEUROD4Q9HD90 331 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 COPRSQ9NQ92 184 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 FAM8A1Q9UBU6 413 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 DMGDHQ9UI17 866 aaKnown RBP7.48□□□□□ -1.21
RPSA-205ENST00000475346 ERBB4Q15303 1308 aa7.48□□□□□ -1.21
RPSA-205ENST00000475346 TNFRSF21O75509 655 aa7.47□□□□□ -1.21
RPSA-205ENST00000475346 GMPRP36959 345 aa7.47□□□□□ -1.21
RPSA-205ENST00000475346 TCEAL1Q15170 157 aa7.47□□□□□ -1.21
RPSA-205ENST00000475346 CKAP2LQ8IYA6 745 aa7.47□□□□□ -1.21
RPSA-205ENST00000475346 ZSCAN10Q96SZ4 725 aaPredicted RBP7.47□□□□□ -1.21
RPSA-205ENST00000475346 USP20Q9Y2K6 914 aa7.47□□□□□ -1.21
RPSA-205ENST00000475346 MRPL42Q9Y6G3 142 aaKnown RBP7.47□□□□□ -1.21
RPSA-205ENST00000475346 CDC14CA4D256 554 aa7.46□□□□□ -1.22
RPSA-205ENST00000475346 GTF2E1P29083 439 aaPredicted RBP7.46□□□□□ -1.22
RPSA-205ENST00000475346 LCE2AQ5TA79 106 aaPredicted RBP7.46□□□□□ -1.22
RPSA-205ENST00000475346 C1orf53Q5VUE5 145 aa7.46□□□□□ -1.22
RPSA-205ENST00000475346 LYSMD3Q7Z3D4 306 aa7.46□□□□□ -1.22
RPSA-205ENST00000475346 ZNF438Q7Z4V0 828 aa7.46□□□□□ -1.22
RPSA-205ENST00000475346 PPARGC1BQ86YN6 1023 aaKnown RBP7.46□□□□□ -1.22
RPSA-205ENST00000475346 CCDC155Q8N6L0 562 aa7.46□□□□□ -1.22
RPSA-205ENST00000475346 RHPN1Q8TCX5 695 aa7.46□□□□□ -1.22
RPSA-205ENST00000475346 SNX29Q8TEQ0 813 aa7.46□□□□□ -1.22
RPSA-205ENST00000475346 MRFAP1L1Q96HT8 127 aa7.46□□□□□ -1.22
RPSA-205ENST00000475346 GPATCH3Q96I76 525 aa7.46□□□□□ -1.22
RPSA-205ENST00000475346 NPHS2Q9NP85 383 aa7.46□□□□□ -1.22
RPSA-205ENST00000475346 K7ELQ4 463 aaPredicted RBP7.45□□□□□ -1.22
RPSA-205ENST00000475346 POLR3DP05423 398 aaPredicted RBP7.45□□□□□ -1.22
RPSA-205ENST00000475346 ST13P50502 369 aaKnown RBP7.45□□□□□ -1.22
RPSA-205ENST00000475346 NFE2L2Q16236 605 aa7.45□□□□□ -1.22
RPSA-205ENST00000475346 NXPE4Q6UWF7 544 aa7.45□□□□□ -1.22
RPSA-205ENST00000475346 ERMP1Q7Z2K6 904 aa7.45□□□□□ -1.22
RPSA-205ENST00000475346 KBTBD4Q9NVX7 518 aa7.45□□□□□ -1.22
RPSA-205ENST00000475346 TGFBR3LH3BV60 316 aa7.44□□□□□ -1.22
RPSA-205ENST00000475346 PHACTR2O75167 634 aa7.44□□□□□ -1.22
RPSA-205ENST00000475346 GADD45BO75293 160 aaPredicted RBP7.44□□□□□ -1.22
RPSA-205ENST00000475346 SSBP05455 408 aaKnown RBP eCLIP7.44□□□□□ -1.22
RPSA-205ENST00000475346 PLA2G4AP47712 749 aa7.44□□□□□ -1.22
RPSA-205ENST00000475346 IDH3AP50213 366 aa7.44□□□□□ -1.22
RPSA-205ENST00000475346 NPAS3Q8IXF0 933 aa7.44□□□□□ -1.22
RPSA-205ENST00000475346 RHBDD1Q8TEB9 315 aa7.44□□□□□ -1.22
RPSA-205ENST00000475346 BCO2Q9BYV7 579 aa7.44□□□□□ -1.22
RPSA-205ENST00000475346 ZFYVE28Q9HCC9 887 aa7.44□□□□□ -1.22
RPSA-205ENST00000475346 F6X3S4 739 aa7.43□□□□□ -1.22
RPSA-205ENST00000475346 POU4F2Q12837 409 aa7.43□□□□□ -1.22
RPSA-205ENST00000475346 PTPROQ16827 1216 aa7.43□□□□□ -1.22
RPSA-205ENST00000475346 CMTR1Q8N1G2 835 aaKnown RBP7.43□□□□□ -1.22
RPSA-205ENST00000475346 AIDAQ96BJ3 306 aa7.43□□□□□ -1.22
RPSA-205ENST00000475346 KLRG1Q96E93 195 aa7.43□□□□□ -1.22
RPSA-205ENST00000475346 HSH2DQ96JZ2 352 aa7.43□□□□□ -1.22
RPSA-205ENST00000475346 SPON2Q9BUD6 331 aa7.43□□□□□ -1.22
RPSA-205ENST00000475346 TTF2Q9UNY4 1162 aaKnown RBP7.43□□□□□ -1.22
RPSA-205ENST00000475346 hCG_2014768A0A024R1R8 64 aa7.42□□□□□ -1.22
RPSA-205ENST00000475346 UBAP1LF5GYI3 381 aa7.42□□□□□ -1.22
RPSA-205ENST00000475346 RAB11FIP3O75154 756 aa7.42□□□□□ -1.22
RPSA-205ENST00000475346 CLSTN1O94985 981 aa7.42□□□□□ -1.22
RPSA-205ENST00000475346 RNF144AP50876 292 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms