RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 CDHR2Q9BYE9 1310 aa12.06□□□□□ -0.48
APTX-219ENST00000474658 PDE8AO60658 829 aa12.05□□□□□ -0.48
APTX-219ENST00000474658 ALDH1L1O75891 902 aa12.05□□□□□ -0.48
APTX-219ENST00000474658 HSP90B1P14625 803 aaKnown RBP12.05□□□□□ -0.48
APTX-219ENST00000474658 CASP7P55210 303 aa12.05□□□□□ -0.48
APTX-219ENST00000474658 UBE3BQ7Z3V4 1068 aa12.05□□□□□ -0.48
APTX-219ENST00000474658 C7orf43Q8WVR3 580 aa12.05□□□□□ -0.48
APTX-219ENST00000474658 OLFM4Q6UX06 510 aa12.04□□□□□ -0.48
APTX-219ENST00000474658 DDX46Q7L014 1031 aaKnown RBP12.04□□□□□ -0.48
APTX-219ENST00000474658 API5Q9BZZ5 524 aaKnown RBP12.04□□□□□ -0.48
APTX-219ENST00000474658 ABCC4O15439 1325 aa12.04□□□□□ -0.48
APTX-219ENST00000474658 KIF16BQ96L93 1317 aa12.04□□□□□ -0.48
APTX-219ENST00000474658 GRM8O00222 908 aa12.03□□□□□ -0.48
APTX-219ENST00000474658 PPEF1O14829 653 aaPredicted RBP12.03□□□□□ -0.48
APTX-219ENST00000474658 GRAPQ13588 217 aa12.03□□□□□ -0.48
APTX-219ENST00000474658 GRAPLQ8TC17 118 aaPredicted RBP12.03□□□□□ -0.48
APTX-219ENST00000474658 ARHGAP45Q92619 1136 aa12.03□□□□□ -0.48
APTX-219ENST00000474658 FRAT1Q92837 279 aaPredicted RBP12.03□□□□□ -0.48
APTX-219ENST00000474658 CCDC85AQ96PX6 553 aaPredicted RBP12.03□□□□□ -0.48
APTX-219ENST00000474658 C9orf78Q9NZ63 289 aaPredicted RBP12.03□□□□□ -0.48
APTX-219ENST00000474658 TAF1P21675 1872 aa12.03□□□□□ -0.48
APTX-219ENST00000474658 CHD4Q14839 1912 aa12.03□□□□□ -0.48
APTX-219ENST00000474658 NFKBIEO00221 500 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 IPO8O15397 1037 aaKnown RBP12.02□□□□□ -0.49
APTX-219ENST00000474658 BBOX1O75936 387 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 YY1P25490 414 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 CTSWP56202 376 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 RASSF7Q02833 373 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 CCDC152Q4G0S7 254 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 CCDC93Q567U6 631 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 SOGA3Q5TF21 947 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 POTEHQ6S545 545 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 SLC51AQ86UW1 340 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 TTLL11Q8NHH1 800 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 CELF1Q92879 486 aaKnown RBP12.02□□□□□ -0.49
APTX-219ENST00000474658 PLA2G12BQ9BX93 195 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 SEC31BQ9NQW1 1179 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 TNNQ9UQP3 1299 aa12.02□□□□□ -0.49
APTX-219ENST00000474658 COL4A1P02462 1669 aa12.01□□□□□ -0.49
APTX-219ENST00000474658 NBPF7P0C2Y1 421 aaPredicted RBP12.01□□□□□ -0.49
APTX-219ENST00000474658 CCT4P50991 539 aaKnown RBP12.01□□□□□ -0.49
APTX-219ENST00000474658 ATF7IPQ6VMQ6 1270 aa12.01□□□□□ -0.49
APTX-219ENST00000474658 ATP6V0A2Q9Y487 856 aa12.01□□□□□ -0.49
APTX-219ENST00000474658 FER1L6Q2WGJ9 1857 aa12□□□□□ -0.49
APTX-219ENST00000474658 CSF1RP07333 972 aa12□□□□□ -0.49
APTX-219ENST00000474658 TRIM27P14373 513 aa12□□□□□ -0.49
APTX-219ENST00000474658 PRELPP51888 382 aa12□□□□□ -0.49
APTX-219ENST00000474658 RPS8P62241 208 aaKnown RBP12□□□□□ -0.49
APTX-219ENST00000474658 FOXO4P98177 505 aa12□□□□□ -0.49
APTX-219ENST00000474658 EPHA10Q5JZY3 1008 aa12□□□□□ -0.49
APTX-219ENST00000474658 C9orf131Q5VYM1 1079 aa12□□□□□ -0.49
APTX-219ENST00000474658 ZKSCAN2Q63HK3 967 aa12□□□□□ -0.49
APTX-219ENST00000474658 CC2D2BQ6DHV5 1058 aa12□□□□□ -0.49
APTX-219ENST00000474658 SP8Q8IXZ3 490 aa12□□□□□ -0.49
APTX-219ENST00000474658 RTKN2Q8IZC4 609 aa12□□□□□ -0.49
APTX-219ENST00000474658 USP44Q9H0E7 712 aa12□□□□□ -0.49
APTX-219ENST00000474658 GREM2Q9H772 168 aa12□□□□□ -0.49
APTX-219ENST00000474658 UTYO14607 1347 aa12□□□□□ -0.49
APTX-219ENST00000474658 MYH3P11055 1940 aa11.99□□□□□ -0.49
APTX-219ENST00000474658 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
APTX-219ENST00000474658 CLUAP1Q96AJ1 413 aa11.99□□□□□ -0.49
APTX-219ENST00000474658 KAZALD1Q96I82 304 aa11.99□□□□□ -0.49
APTX-219ENST00000474658 SUCLG2Q96I99 432 aa11.99□□□□□ -0.49
APTX-219ENST00000474658 TMX4Q9H1E5 349 aaPredicted RBP11.99□□□□□ -0.49
APTX-219ENST00000474658 TAOK3Q9H2K8 898 aa11.99□□□□□ -0.49
APTX-219ENST00000474658 RNF181Q9P0P0 153 aa11.99□□□□□ -0.49
APTX-219ENST00000474658 SBF1O95248 1867 aa11.99□□□□□ -0.49
APTX-219ENST00000474658 SNED1Q8TER0 1413 aa11.98□□□□□ -0.49
APTX-219ENST00000474658 RTL9Q8NET4 1388 aa11.98□□□□□ -0.49
APTX-219ENST00000474658 LTBP3Q9NS15 1303 aa11.98□□□□□ -0.49
APTX-219ENST00000474658 LMNB1P20700 586 aa11.98□□□□□ -0.49
APTX-219ENST00000474658 FKBP4Q02790 459 aaKnown RBP eCLIP11.98□□□□□ -0.49
APTX-219ENST00000474658 FAM161AQ3B820 660 aa11.98□□□□□ -0.49
APTX-219ENST00000474658 LMBR1LQ6UX01 489 aa11.98□□□□□ -0.49
APTX-219ENST00000474658 TMC4Q7Z404 712 aa11.98□□□□□ -0.49
APTX-219ENST00000474658 RCAN3Q9UKA8 241 aa11.98□□□□□ -0.49
APTX-219ENST00000474658 ITGA6P23229 1130 aa11.97□□□□□ -0.49
APTX-219ENST00000474658 GRIPAP1Q4V328 841 aa11.97□□□□□ -0.49
APTX-219ENST00000474658 ANKRD18AQ8IVF6 992 aa11.97□□□□□ -0.49
APTX-219ENST00000474658 CDC5LQ99459 802 aaKnown RBP11.97□□□□□ -0.49
APTX-219ENST00000474658 ZNF277Q9NRM2 450 aaPredicted RBP11.97□□□□□ -0.49
APTX-219ENST00000474658 CHMP3Q9Y3E7 222 aa11.97□□□□□ -0.49
APTX-219ENST00000474658 CCDC88AQ3V6T2 1871 aa11.97□□□□□ -0.49
APTX-219ENST00000474658 ANKRD18BA2A2Z9 1011 aa11.96□□□□□ -0.49
APTX-219ENST00000474658 DPP8Q6V1X1 898 aaPredicted RBP11.96□□□□□ -0.49
APTX-219ENST00000474658 MPNDQ8N594 471 aa11.96□□□□□ -0.49
APTX-219ENST00000474658 TMEM57Q8N5G2 664 aa11.96□□□□□ -0.49
APTX-219ENST00000474658 PSMD1Q99460 953 aa11.96□□□□□ -0.49
APTX-219ENST00000474658 LRRC37AA6NMS7 1700 aa11.95□□□□□ -0.5
APTX-219ENST00000474658 UBTFL1P0CB47 393 aaPredicted RBP11.95□□□□□ -0.5
APTX-219ENST00000474658 GPSM2P81274 684 aa11.95□□□□□ -0.5
APTX-219ENST00000474658 IFIT5Q13325 482 aaKnown RBP11.95□□□□□ -0.5
APTX-219ENST00000474658 DZIP1LQ8IYY4 767 aaKnown RBP11.95□□□□□ -0.5
APTX-219ENST00000474658 MEIS3Q99687 375 aa11.95□□□□□ -0.5
APTX-219ENST00000474658 BICC1Q9H694 974 aaKnown RBP11.95□□□□□ -0.5
APTX-219ENST00000474658 NSFL1CQ9UNZ2 370 aaKnown RBP11.95□□□□□ -0.5
APTX-219ENST00000474658 RLBP1P12271 317 aa11.94□□□□□ -0.5
APTX-219ENST00000474658 IGHMBP2P38935 993 aaKnown RBP11.94□□□□□ -0.5
APTX-219ENST00000474658 IARSP41252 1262 aaKnown RBP11.94□□□□□ -0.5
APTX-219ENST00000474658 CCDC57Q2TAC2 916 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms