RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SFMBT1Q9UHJ3 866 aa7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 TCEAL9Q9UHQ7 104 aa7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 COL4A3BPQ9Y5P4 624 aa7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 TNRC18O15417 2968 aaPredicted RBP7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 CNTNAP1P78357 1384 aa7.46□□□□□ -1.22
SMARCE1-208ENST00000474246 TIMM44O43615 452 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 RECKO95980 971 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 FLT3P36888 993 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 RNF187Q5TA31 235 aaPredicted RBP7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 NT5DC4Q86YG4 428 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 PARP9Q8IXQ6 854 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 ZNF512BQ96KM6 892 aaPredicted RBP7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 PAIP2Q9BPZ3 127 aaKnown RBP7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 ANAPC4Q9UJX5 808 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 ERVK-7P63135 1459 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 S100BP04271 92 aaPredicted RBP7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 NUDT7P0C024 238 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 SLC20A2Q08357 652 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 ARSIQ5FYB1 569 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 FMNL3Q8IVF7 1028 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 RSPH1Q8WYR4 309 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 GLMNQ92990 594 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 SMC3Q9UQE7 1217 aa7.45□□□□□ -1.22
SMARCE1-208ENST00000474246 SYNGAP1Q96PV0 1343 aa7.44□□□□□ -1.22
SMARCE1-208ENST00000474246 MARSP56192 900 aaKnown RBP7.44□□□□□ -1.22
SMARCE1-208ENST00000474246 POU5F1BQ06416 359 aa7.44□□□□□ -1.22
SMARCE1-208ENST00000474246 DHX8Q14562 1220 aaKnown RBP7.44□□□□□ -1.22
SMARCE1-208ENST00000474246 ZSCAN30Q86W11 494 aa7.44□□□□□ -1.22
SMARCE1-208ENST00000474246 KLF15Q9UIH9 416 aa7.44□□□□□ -1.22
SMARCE1-208ENST00000474246 HMMRO75330 724 aa7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 MMRN1Q13201 1228 aa7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 DOK7Q18PE1 504 aa7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 L1TD1Q5T7N2 865 aaKnown RBP7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 NEUROD6Q96NK8 337 aa7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 BEGAINQ9BUH8 593 aa7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 ATP1B4Q9UN42 357 aaPredicted RBP7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 PCDHGA10Q9Y5H3 936 aa7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 MAP3K7O43318 606 aa7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 RFX1P22670 979 aa7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 FECHP22830 423 aa7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 PDE3BQ13370 1112 aa7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 SAFB2Q14151 953 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 CDHR5Q9HBB8 845 aa7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 PCDH12Q9NPG4 1184 aa7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 PIK3R4Q99570 1358 aa7.43□□□□□ -1.22
SMARCE1-208ENST00000474246 SPDYE5A6NIY4 337 aa7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 TNNT2P45379 298 aaPredicted RBP7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 SRPK2P78362 688 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 DGKZQ13574 1117 aa7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 ITFG2Q969R8 447 aa7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 FAM210AQ96ND0 272 aa7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 NOL7Q9UMY1 257 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 PKD1L2Q7Z442 2459 aa7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 IPO8O15397 1037 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 TERF1P54274 439 aa7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 KCTD2Q14681 263 aa7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 ZHX3Q9H4I2 956 aa7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 PIF1Q9H611 641 aa7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 AKAP2Q9Y2D5 859 aa7.42□□□□□ -1.22
SMARCE1-208ENST00000474246 CTTNBP2Q8WZ74 1663 aa7.41□□□□□ -1.22
SMARCE1-208ENST00000474246 PLEKHG2Q9H7P9 1386 aa7.41□□□□□ -1.22
SMARCE1-208ENST00000474246 FCHSD2O94868 740 aa7.41□□□□□ -1.22
SMARCE1-208ENST00000474246 UBE4AQ14139 1066 aa7.41□□□□□ -1.22
SMARCE1-208ENST00000474246 MAPRE1Q15691 268 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-208ENST00000474246 RPUSD2Q8IZ73 545 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-208ENST00000474246 ZNF710Q8N1W2 664 aa7.41□□□□□ -1.22
SMARCE1-208ENST00000474246 SVIPQ8NHG7 77 aa7.41□□□□□ -1.22
SMARCE1-208ENST00000474246 DHX38Q92620 1227 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-208ENST00000474246 ISY1Q9ULR0 285 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-208ENST00000474246 TBC1D2BQ9UPU7 963 aa7.41□□□□□ -1.22
SMARCE1-208ENST00000474246 THSD7AQ9UPZ6 1657 aa7.41□□□□□ -1.22
SMARCE1-208ENST00000474246 TMEM88BA6NKF7 163 aa7.4□□□□□ -1.22
SMARCE1-208ENST00000474246 GNPATO15228 680 aa7.4□□□□□ -1.22
SMARCE1-208ENST00000474246 FGAP02671 866 aa7.4□□□□□ -1.22
SMARCE1-208ENST00000474246 LDHCP07864 332 aa7.4□□□□□ -1.22
SMARCE1-208ENST00000474246 PSMD2Q13200 908 aa7.4□□□□□ -1.22
SMARCE1-208ENST00000474246 CC2D1AQ6P1N0 951 aaPredicted RBP7.4□□□□□ -1.22
SMARCE1-208ENST00000474246 RETREG1Q9H6L5 497 aa7.4□□□□□ -1.22
SMARCE1-208ENST00000474246 CASS4Q9NQ75 786 aa7.4□□□□□ -1.22
SMARCE1-208ENST00000474246 DDX56Q9NY93 547 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-208ENST00000474246 RIMBP2O15034 1052 aa7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 KIF3BO15066 747 aa7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 COL6A1P12109 1028 aa7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 HDGFP51858 240 aaKnown RBP7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 PTGDRQ13258 359 aa7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 AMHR2Q16671 573 aa7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 CCDC92Q53HC0 331 aaPredicted RBP7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 GPR153Q6NV75 609 aa7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 RUNDC1Q96C34 613 aa7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 LRRC27Q9C0I9 530 aa7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 CXorf56Q9H5V9 222 aa7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 ADGRL3Q9HAR2 1447 aa7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 NPHP3Q7Z494 1330 aa7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 PTPN23Q9H3S7 1636 aa7.4□□□□□ -1.23
SMARCE1-208ENST00000474246 NOS1P29475 1434 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 HIC1Q14526 733 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 UTP14CQ5TAP6 766 aaKnown RBP7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 TTC39BQ5VTQ0 682 aaPredicted RBP7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 TYW1BQ6NUM6 668 aa7.39□□□□□ -1.23
SMARCE1-208ENST00000474246 ANKRD13BQ86YJ7 626 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms