RNA–Protein interactions for RNA: ENST00000474137.1

BBX-224, Transcript of BBX, HMG-box containing, humanhuman

TSL 2

Gene BBX, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-224ENST00000474137 THUMPD2Q9BTF0 503 aaKnown RBP11.31□□□□□ -0.6
BBX-224ENST00000474137 UBR3Q6ZT12 1888 aa11.31□□□□□ -0.6
BBX-224ENST00000474137 HEG1Q9ULI3 1381 aa11.3□□□□□ -0.6
BBX-224ENST00000474137 ST8SIA5O15466 376 aa11.3□□□□□ -0.6
BBX-224ENST00000474137 CRKLP46109 303 aaKnown RBP11.3□□□□□ -0.6
BBX-224ENST00000474137 DNAJC10Q8IXB1 793 aa11.3□□□□□ -0.6
BBX-224ENST00000474137 SLC16A10Q8TF71 515 aa11.3□□□□□ -0.6
BBX-224ENST00000474137 PDGFDQ9GZP0 370 aaPredicted RBP11.3□□□□□ -0.6
BBX-224ENST00000474137 AAASQ9NRG9 546 aa11.3□□□□□ -0.6
BBX-224ENST00000474137 DAXXQ9UER7 740 aaPredicted RBP11.3□□□□□ -0.6
BBX-224ENST00000474137 TSPYL4Q9UJ04 414 aa11.3□□□□□ -0.6
BBX-224ENST00000474137 ZNF330Q9Y3S2 320 aaPredicted RBP11.3□□□□□ -0.6
BBX-224ENST00000474137 RFC4P35249 363 aa11.29□□□□□ -0.6
BBX-224ENST00000474137 CALD1Q05682 793 aaKnown RBP11.29□□□□□ -0.6
BBX-224ENST00000474137 CCDC184Q52MB2 194 aa11.29□□□□□ -0.6
BBX-224ENST00000474137 MSL1Q68DK7 614 aa11.29□□□□□ -0.6
BBX-224ENST00000474137 FAM9BQ8IZU0 186 aa11.29□□□□□ -0.6
BBX-224ENST00000474137 ZNF496Q96IT1 587 aaPredicted RBP11.29□□□□□ -0.6
BBX-224ENST00000474137 SLC4A9Q96Q91 983 aa11.29□□□□□ -0.6
BBX-224ENST00000474137 TEX13AQ9BXU3 409 aaPredicted RBP11.29□□□□□ -0.6
BBX-224ENST00000474137 CCDC87Q9NVE4 849 aa11.29□□□□□ -0.6
BBX-224ENST00000474137 LAS1LQ9Y4W2 734 aaKnown RBP11.29□□□□□ -0.6
BBX-224ENST00000474137 NBPF26B4DH59 902 aa11.28□□□□□ -0.6
BBX-224ENST00000474137 RNF223E7ERA6 249 aa11.28□□□□□ -0.6
BBX-224ENST00000474137 APAF1O14727 1248 aa11.28□□□□□ -0.6
BBX-224ENST00000474137 WIPF1O43516 503 aa11.28□□□□□ -0.6
BBX-224ENST00000474137 TRAPPC3LQ5T215 181 aa11.28□□□□□ -0.6
BBX-224ENST00000474137 RC3H1Q5TC82 1133 aaKnown RBP11.28□□□□□ -0.6
BBX-224ENST00000474137 DIEXFQ68CQ4 756 aaKnown RBP11.28□□□□□ -0.6
BBX-224ENST00000474137 COL23A1Q86Y22 540 aaPredicted RBP11.28□□□□□ -0.6
BBX-224ENST00000474137 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
BBX-224ENST00000474137 KDM3BQ7LBC6 1761 aa11.28□□□□□ -0.6
BBX-224ENST00000474137 LAMB4A4D0S4 1761 aa11.27□□□□□ -0.61
BBX-224ENST00000474137 MAP3K7O43318 606 aa11.27□□□□□ -0.61
BBX-224ENST00000474137 ZPR1O75312 459 aa11.27□□□□□ -0.61
BBX-224ENST00000474137 SNRPA1P09661 255 aaKnown RBP11.27□□□□□ -0.61
BBX-224ENST00000474137 HOMEZQ8IX15 550 aa11.27□□□□□ -0.61
BBX-224ENST00000474137 EMID1Q96A84 441 aaPredicted RBP11.27□□□□□ -0.61
BBX-224ENST00000474137 MIS18AQ9NYP9 233 aa11.27□□□□□ -0.61
BBX-224ENST00000474137 KCNQ3O43525 872 aa11.26□□□□□ -0.61
BBX-224ENST00000474137 RPS6KA4O75676 772 aa11.26□□□□□ -0.61
BBX-224ENST00000474137 CYP19A1P11511 503 aaPredicted RBP11.26□□□□□ -0.61
BBX-224ENST00000474137 CANXP27824 592 aaKnown RBP11.26□□□□□ -0.61
BBX-224ENST00000474137 TSR1Q2NL82 804 aaKnown RBP11.26□□□□□ -0.61
BBX-224ENST00000474137 ZNF697Q5TEC3 545 aa11.26□□□□□ -0.61
BBX-224ENST00000474137 DDX12PQ92771 950 aa11.26□□□□□ -0.61
BBX-224ENST00000474137 ZBTB1Q9Y2K1 713 aa11.26□□□□□ -0.61
BBX-224ENST00000474137 COL15A1P39059 1388 aa11.26□□□□□ -0.61
BBX-224ENST00000474137 C4AP0C0L4 1744 aa11.26□□□□□ -0.61
BBX-224ENST00000474137 TNFRSF10AO00220 468 aa11.25□□□□□ -0.61
BBX-224ENST00000474137 SMIM5Q71RC9 77 aa11.25□□□□□ -0.61
BBX-224ENST00000474137 ZC3H15Q8WU90 426 aaKnown RBP11.25□□□□□ -0.61
BBX-224ENST00000474137 TATDN2Q93075 761 aa11.25□□□□□ -0.61
BBX-224ENST00000474137 PNMA3Q9UL41 463 aa11.25□□□□□ -0.61
BBX-224ENST00000474137 A0A087WZG4 1122 aa11.24□□□□□ -0.61
BBX-224ENST00000474137 SENP3-EIF4A1A0A087X0R7 540 aa11.24□□□□□ -0.61
BBX-224ENST00000474137 PRSS12P56730 875 aa11.24□□□□□ -0.61
BBX-224ENST00000474137 AMIGO3Q86WK7 504 aa11.24□□□□□ -0.61
BBX-224ENST00000474137 ARHGEF1Q92888 912 aaKnown RBP11.24□□□□□ -0.61
BBX-224ENST00000474137 BABAM1Q9NWV8 329 aa11.24□□□□□ -0.61
BBX-224ENST00000474137 MYH14Q7Z406 1995 aaKnown RBP11.24□□□□□ -0.61
BBX-224ENST00000474137 SOS1Q07889 1333 aaPredicted RBP11.24□□□□□ -0.61
BBX-224ENST00000474137 INTS5Q6P9B9 1019 aaKnown RBP11.23□□□□□ -0.61
BBX-224ENST00000474137 SALL2Q9Y467 1007 aaPredicted RBP11.23□□□□□ -0.61
BBX-224ENST00000474137 CCER2I3L3R5 266 aa11.22□□□□□ -0.61
BBX-224ENST00000474137 GDF9O60383 454 aa11.22□□□□□ -0.61
BBX-224ENST00000474137 EIF4A1P60842 406 aaKnown RBP11.22□□□□□ -0.61
BBX-224ENST00000474137 GNAI1P63096 354 aa11.22□□□□□ -0.61
BBX-224ENST00000474137 NLGN1Q8N2Q7 840 aa11.22□□□□□ -0.61
BBX-224ENST00000474137 USP42Q9H9J4 1324 aaKnown RBP11.22□□□□□ -0.61
BBX-224ENST00000474137 PRAMEF22A3QJZ6 481 aa11.21□□□□□ -0.61
BBX-224ENST00000474137 DPYSL4O14531 572 aa11.21□□□□□ -0.61
BBX-224ENST00000474137 NPHP1O15259 732 aa11.21□□□□□ -0.61
BBX-224ENST00000474137 A1BGP04217 495 aa11.21□□□□□ -0.61
BBX-224ENST00000474137 MMP10P09238 476 aa11.21□□□□□ -0.61
BBX-224ENST00000474137 IL6STP40189 918 aaPredicted RBP11.21□□□□□ -0.61
BBX-224ENST00000474137 NFX1Q12986 1120 aaKnown RBP11.21□□□□□ -0.61
BBX-224ENST00000474137 ANKLE1Q8NAG6 615 aa11.21□□□□□ -0.61
BBX-224ENST00000474137 FHDC1Q9C0D6 1143 aaPredicted RBP11.21□□□□□ -0.61
BBX-224ENST00000474137 SLC24A3Q9HC58 644 aa11.21□□□□□ -0.61
BBX-224ENST00000474137 IFT57Q9NWB7 429 aa11.21□□□□□ -0.61
BBX-224ENST00000474137 FAM198AQ9UFP1 575 aa11.21□□□□□ -0.61
BBX-224ENST00000474137 SRP68Q9UHB9 627 aaKnown RBP11.21□□□□□ -0.61
BBX-224ENST00000474137 PARP3Q9Y6F1 533 aa11.21□□□□□ -0.61
BBX-224ENST00000474137 SCN7AQ01118 1682 aa11.2□□□□□ -0.62
BBX-224ENST00000474137 GIGYF1O75420 1035 aaPredicted RBP11.2□□□□□ -0.62
BBX-224ENST00000474137 EIF2S2P20042 333 aaKnown RBP11.2□□□□□ -0.62
BBX-224ENST00000474137 PIP4K2AP48426 406 aaPredicted RBP11.2□□□□□ -0.62
BBX-224ENST00000474137 USPL1Q5W0Q7 1092 aa11.2□□□□□ -0.62
BBX-224ENST00000474137 ZNF652Q9Y2D9 606 aa11.2□□□□□ -0.62
BBX-224ENST00000474137 USP16Q9Y5T5 823 aa11.2□□□□□ -0.62
BBX-224ENST00000474137 SRCAPQ6ZRS2 3230 aa11.2□□□□□ -0.62
BBX-224ENST00000474137 COL24A1Q17RW2 1714 aa11.19□□□□□ -0.62
BBX-224ENST00000474137 GYS1P13807 737 aa11.19□□□□□ -0.62
BBX-224ENST00000474137 MYL6BP14649 208 aa11.19□□□□□ -0.62
BBX-224ENST00000474137 CCDC27Q2M243 656 aa11.19□□□□□ -0.62
BBX-224ENST00000474137 KIF6Q6ZMV9 814 aa11.19□□□□□ -0.62
BBX-224ENST00000474137 DZIP3Q86Y13 1208 aaKnown RBP11.19□□□□□ -0.62
BBX-224ENST00000474137 MBIPQ9NS73 344 aa11.19□□□□□ -0.62
BBX-224ENST00000474137 NARFQ9UHQ1 456 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms