RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 CEP350Q5VT06 3117 aa16.73■□□□□ 0.27
BRAT1-205ENST00000473879 PI4KAP2A4QPH2 592 aa16.73■□□□□ 0.27
BRAT1-205ENST00000473879 ATP5J2-PTCD1G3V325 749 aa16.73■□□□□ 0.27
BRAT1-205ENST00000473879 IGKV5-2P06315 115 aa16.73■□□□□ 0.27
BRAT1-205ENST00000473879 RLBP1P12271 317 aa16.73■□□□□ 0.27
BRAT1-205ENST00000473879 AAMPQ13685 434 aa16.73■□□□□ 0.27
BRAT1-205ENST00000473879 MVPQ14764 893 aaKnown RBP16.73■□□□□ 0.27
BRAT1-205ENST00000473879 PI4KAP1Q8N8J0 262 aa16.73■□□□□ 0.27
BRAT1-205ENST00000473879 EXOC6Q8TAG9 804 aa16.73■□□□□ 0.27
BRAT1-205ENST00000473879 CHMP4BQ9H444 224 aaKnown RBP16.73■□□□□ 0.27
BRAT1-205ENST00000473879 TNNQ9UQP3 1299 aa16.73■□□□□ 0.27
BRAT1-205ENST00000473879 COG6Q9Y2V7 657 aa16.73■□□□□ 0.27
BRAT1-205ENST00000473879 CC2D2BQ6DHV5 1058 aa16.72■□□□□ 0.27
BRAT1-205ENST00000473879 ITPRIPQ8IWB1 547 aa16.72■□□□□ 0.27
BRAT1-205ENST00000473879 RTKN2Q8IZC4 609 aa16.72■□□□□ 0.27
BRAT1-205ENST00000473879 SYNE4Q8N205 404 aa16.72■□□□□ 0.27
BRAT1-205ENST00000473879 DDX19BQ9UMR2 479 aa16.72■□□□□ 0.27
BRAT1-205ENST00000473879 SNED1Q8TER0 1413 aa16.71■□□□□ 0.27
BRAT1-205ENST00000473879 HCLS1P14317 486 aaPredicted RBP16.71■□□□□ 0.27
BRAT1-205ENST00000473879 C1QTNF8P60827 252 aa16.71■□□□□ 0.27
BRAT1-205ENST00000473879 TMEM57Q8N5G2 664 aa16.71■□□□□ 0.27
BRAT1-205ENST00000473879 CCDC191Q8NCU4 936 aa16.71■□□□□ 0.27
BRAT1-205ENST00000473879 MYD88Q99836 296 aa16.71■□□□□ 0.27
BRAT1-205ENST00000473879 MAP3K2Q9Y2U5 619 aa16.71■□□□□ 0.27
BRAT1-205ENST00000473879 KIF3CO14782 793 aa16.7■□□□□ 0.26
BRAT1-205ENST00000473879 CCT4P50991 539 aaKnown RBP16.7■□□□□ 0.26
BRAT1-205ENST00000473879 FKBP4Q02790 459 aaKnown RBP eCLIP16.7■□□□□ 0.26
BRAT1-205ENST00000473879 GRIPAP1Q4V328 841 aa16.7■□□□□ 0.26
BRAT1-205ENST00000473879 FAM89AQ96GI7 184 aa16.7■□□□□ 0.26
BRAT1-205ENST00000473879 PPP4R2Q9NY27 417 aa16.7■□□□□ 0.26
BRAT1-205ENST00000473879 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
BRAT1-205ENST00000473879 INTS3Q68E01 1043 aaKnown RBP16.69■□□□□ 0.26
BRAT1-205ENST00000473879 OLFM4Q6UX06 510 aa16.69■□□□□ 0.26
BRAT1-205ENST00000473879 ZBTB38Q8NAP3 1195 aaPredicted RBP16.69■□□□□ 0.26
BRAT1-205ENST00000473879 GLTPD2A6NH11 291 aa16.68■□□□□ 0.26
BRAT1-205ENST00000473879 PPEF1O14829 653 aaPredicted RBP16.68■□□□□ 0.26
BRAT1-205ENST00000473879 SF3B3Q15393 1217 aaKnown RBP16.68■□□□□ 0.26
BRAT1-205ENST00000473879 DNAAF4Q8WXU2 420 aa16.68■□□□□ 0.26
BRAT1-205ENST00000473879 PSMD1Q99460 953 aa16.68■□□□□ 0.26
BRAT1-205ENST00000473879 COL4A1P02462 1669 aa16.68■□□□□ 0.26
BRAT1-205ENST00000473879 LRRC37AA6NMS7 1700 aa16.67■□□□□ 0.26
BRAT1-205ENST00000473879 NEURL1BA8MQ27 555 aa16.67■□□□□ 0.26
BRAT1-205ENST00000473879 F6X3S4 739 aa16.67■□□□□ 0.26
BRAT1-205ENST00000473879 IRS4O14654 1257 aaPredicted RBP16.67■□□□□ 0.26
BRAT1-205ENST00000473879 BBOX1O75936 387 aa16.67■□□□□ 0.26
BRAT1-205ENST00000473879 HSP90B1P14625 803 aaKnown RBP16.67■□□□□ 0.26
BRAT1-205ENST00000473879 CASP7P55210 303 aa16.67■□□□□ 0.26
BRAT1-205ENST00000473879 BEND3Q5T5X7 828 aa16.67■□□□□ 0.26
BRAT1-205ENST00000473879 SLC4A10Q6U841 1118 aa16.67■□□□□ 0.26
BRAT1-205ENST00000473879 DDX46Q7L014 1031 aaKnown RBP16.67■□□□□ 0.26
BRAT1-205ENST00000473879 LINS1Q8NG48 757 aa16.67■□□□□ 0.26
BRAT1-205ENST00000473879 NMRK2Q9NPI5 230 aa16.67■□□□□ 0.26
BRAT1-205ENST00000473879 CWC25Q9NXE8 425 aaPredicted RBP16.67■□□□□ 0.26
BRAT1-205ENST00000473879 CDHR2Q9BYE9 1310 aa16.67■□□□□ 0.26
BRAT1-205ENST00000473879 MYH3P11055 1940 aa16.66■□□□□ 0.26
BRAT1-205ENST00000473879 PCCAP05165 728 aaPredicted RBP16.66■□□□□ 0.26
BRAT1-205ENST00000473879 NEXNQ0ZGT2 675 aa16.66■□□□□ 0.26
BRAT1-205ENST00000473879 GRAPQ13588 217 aa16.66■□□□□ 0.26
BRAT1-205ENST00000473879 GRAPLQ8TC17 118 aaPredicted RBP16.66■□□□□ 0.26
BRAT1-205ENST00000473879 ATP6V0A2Q9Y487 856 aa16.66■□□□□ 0.26
BRAT1-205ENST00000473879 RTL5Q5HYW3 569 aaPredicted RBP16.65■□□□□ 0.26
BRAT1-205ENST00000473879 DPY19L2Q6NUT2 758 aa16.65■□□□□ 0.26
BRAT1-205ENST00000473879 TMX4Q9H1E5 349 aaPredicted RBP16.65■□□□□ 0.26
BRAT1-205ENST00000473879 ZNF277Q9NRM2 450 aaPredicted RBP16.65■□□□□ 0.26
BRAT1-205ENST00000473879 H7C1W4 665 aa16.64■□□□□ 0.25
BRAT1-205ENST00000473879 IARSP41252 1262 aaKnown RBP16.64■□□□□ 0.25
BRAT1-205ENST00000473879 GCKRQ14397 625 aa16.64■□□□□ 0.25
BRAT1-205ENST00000473879 CWF19L2Q2TBE0 894 aaKnown RBP16.64■□□□□ 0.25
BRAT1-205ENST00000473879 TMC4Q7Z404 712 aa16.64■□□□□ 0.25
BRAT1-205ENST00000473879 SP8Q8IXZ3 490 aa16.64■□□□□ 0.25
BRAT1-205ENST00000473879 SRCIN1Q9C0H9 1055 aa16.64■□□□□ 0.25
BRAT1-205ENST00000473879 RRAGCQ9HB90 399 aa16.64■□□□□ 0.25
BRAT1-205ENST00000473879 LTBP1Q14766 1721 aa16.64■□□□□ 0.25
BRAT1-205ENST00000473879 TOMM70O94826 608 aa16.63■□□□□ 0.25
BRAT1-205ENST00000473879 CCDC136Q96JN2 1154 aa16.63■□□□□ 0.25
BRAT1-205ENST00000473879 UTYO14607 1347 aa16.63■□□□□ 0.25
BRAT1-205ENST00000473879 PDE8AO60658 829 aa16.62■□□□□ 0.25
BRAT1-205ENST00000473879 PLA2G12BQ9BX93 195 aa16.62■□□□□ 0.25
BRAT1-205ENST00000473879 TAF1P21675 1872 aa16.62■□□□□ 0.25
BRAT1-205ENST00000473879 RTL9Q8NET4 1388 aa16.62■□□□□ 0.25
BRAT1-205ENST00000473879 ZBTB7BO15156 539 aaPredicted RBP16.61■□□□□ 0.25
BRAT1-205ENST00000473879 ALDH1L1O75891 902 aa16.61■□□□□ 0.25
BRAT1-205ENST00000473879 SLC51AQ86UW1 340 aa16.61■□□□□ 0.25
BRAT1-205ENST00000473879 RTFDC1Q9BY42 306 aaPredicted RBP16.61■□□□□ 0.25
BRAT1-205ENST00000473879 VPS33BQ9H267 617 aa16.61■□□□□ 0.25
BRAT1-205ENST00000473879 ZBTB40Q9NUA8 1239 aa16.61■□□□□ 0.25
BRAT1-205ENST00000473879 WDR90Q96KV7 1748 aa16.61■□□□□ 0.25
BRAT1-205ENST00000473879 FZD9O00144 591 aa16.6■□□□□ 0.25
BRAT1-205ENST00000473879 GNAI3P08754 354 aa16.6■□□□□ 0.25
BRAT1-205ENST00000473879 VEGFAP15692 232 aaPredicted RBP16.6■□□□□ 0.25
BRAT1-205ENST00000473879 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
BRAT1-205ENST00000473879 C16orf71Q8IYS4 520 aaPredicted RBP16.6■□□□□ 0.25
BRAT1-205ENST00000473879 SUPT20HQ8NEM7 779 aa16.6■□□□□ 0.25
BRAT1-205ENST00000473879 JARID2Q92833 1246 aaPredicted RBP16.6■□□□□ 0.25
BRAT1-205ENST00000473879 CELF1Q92879 486 aaKnown RBP16.6■□□□□ 0.25
BRAT1-205ENST00000473879 POTECB2RU33 542 aa16.59■□□□□ 0.25
BRAT1-205ENST00000473879 DDNO94850 711 aaPredicted RBP16.59■□□□□ 0.25
BRAT1-205ENST00000473879 DPP8Q6V1X1 898 aaPredicted RBP16.59■□□□□ 0.25
BRAT1-205ENST00000473879 MPNDQ8N594 471 aa16.59■□□□□ 0.25
BRAT1-205ENST00000473879 RBM46Q8TBY0 533 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms