RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 BBXQ8WY36 941 aaPredicted RBP12.26□□□□□ -0.45
APTX-216ENST00000472896 ZNF622Q969S3 477 aaKnown RBP eCLIP12.26□□□□□ -0.45
APTX-216ENST00000472896 SLC52A2Q9HAB3 445 aa12.26□□□□□ -0.45
APTX-216ENST00000472896 CWC22Q9HCG8 908 aaKnown RBP12.26□□□□□ -0.45
APTX-216ENST00000472896 LMBRD1Q9NUN5 540 aa12.26□□□□□ -0.45
APTX-216ENST00000472896 FTSJ3Q8IY81 847 aaKnown RBP12.25□□□□□ -0.45
APTX-216ENST00000472896 KIF2CQ99661 725 aa12.25□□□□□ -0.45
APTX-216ENST00000472896 DLEC1Q9Y238 1755 aa12.25□□□□□ -0.45
APTX-216ENST00000472896 COL15A1P39059 1388 aa12.25□□□□□ -0.45
APTX-216ENST00000472896 VEGFBP49765 207 aa12.25□□□□□ -0.45
APTX-216ENST00000472896 NUCB1Q02818 461 aa12.25□□□□□ -0.45
APTX-216ENST00000472896 CAVIN1Q6NZI2 390 aaKnown RBP12.25□□□□□ -0.45
APTX-216ENST00000472896 CNTNAP1P78357 1384 aa12.24□□□□□ -0.45
APTX-216ENST00000472896 RNMTO43148 476 aaKnown RBP12.24□□□□□ -0.45
APTX-216ENST00000472896 CYP2E1P05181 493 aaPredicted RBP12.24□□□□□ -0.45
APTX-216ENST00000472896 TBC1D9BQ66K14 1250 aa12.24□□□□□ -0.45
APTX-216ENST00000472896 PASKQ96RG2 1323 aa12.23□□□□□ -0.45
APTX-216ENST00000472896 SCN11AQ9UI33 1791 aa12.23□□□□□ -0.45
APTX-216ENST00000472896 GTF2E1P29083 439 aaPredicted RBP12.23□□□□□ -0.45
APTX-216ENST00000472896 IL13P35225 146 aa12.23□□□□□ -0.45
APTX-216ENST00000472896 AKAP4Q5JQC9 854 aa12.23□□□□□ -0.45
APTX-216ENST00000472896 ZBTB22O15209 634 aa12.23□□□□□ -0.45
APTX-216ENST00000472896 CTCFP49711 727 aaPredicted RBP12.23□□□□□ -0.45
APTX-216ENST00000472896 LBX1P52954 281 aa12.23□□□□□ -0.45
APTX-216ENST00000472896 MCTP1Q6DN14 999 aa12.23□□□□□ -0.45
APTX-216ENST00000472896 GAS2L2Q8NHY3 880 aa12.23□□□□□ -0.45
APTX-216ENST00000472896 DICER1Q9UPY3 1922 aaKnown RBP12.22□□□□□ -0.45
APTX-216ENST00000472896 ANKRD31Q8N7Z5 1873 aa12.22□□□□□ -0.45
APTX-216ENST00000472896 ITGBL1O95965 494 aaPredicted RBP12.22□□□□□ -0.45
APTX-216ENST00000472896 MBD3O95983 291 aa12.22□□□□□ -0.45
APTX-216ENST00000472896 EIF5P55010 431 aaKnown RBP12.22□□□□□ -0.45
APTX-216ENST00000472896 RABEP1Q15276 862 aa12.22□□□□□ -0.45
APTX-216ENST00000472896 BRIP1Q9BX63 1249 aa12.22□□□□□ -0.45
APTX-216ENST00000472896 WBP1LQ9NX94 342 aa12.22□□□□□ -0.45
APTX-216ENST00000472896 TNNQ9UQP3 1299 aa12.22□□□□□ -0.45
APTX-216ENST00000472896 FER1L6Q2WGJ9 1857 aa12.22□□□□□ -0.45
APTX-216ENST00000472896 UVSSAQ2YD98 709 aa12.21□□□□□ -0.45
APTX-216ENST00000472896 PRR5LQ6MZQ0 368 aa12.21□□□□□ -0.45
APTX-216ENST00000472896 LTBP3Q9NS15 1303 aa12.21□□□□□ -0.46
APTX-216ENST00000472896 PDE6BP35913 854 aa12.2□□□□□ -0.46
APTX-216ENST00000472896 IPO4Q8TEX9 1081 aaKnown RBP12.2□□□□□ -0.46
APTX-216ENST00000472896 PIBF1Q8WXW3 757 aa12.2□□□□□ -0.46
APTX-216ENST00000472896 TAOK3Q9H2K8 898 aa12.2□□□□□ -0.46
APTX-216ENST00000472896 CHMP4BQ9H444 224 aaKnown RBP12.2□□□□□ -0.46
APTX-216ENST00000472896 TAF1DQ9H5J8 278 aaPredicted RBP12.2□□□□□ -0.46
APTX-216ENST00000472896 KIF3AQ9Y496 699 aa12.2□□□□□ -0.46
APTX-216ENST00000472896 SLX4Q8IY92 1834 aa12.2□□□□□ -0.46
APTX-216ENST00000472896 PTMAP06454 111 aaKnown RBP12.2□□□□□ -0.46
APTX-216ENST00000472896 DNTTIP2Q5QJE6 756 aaKnown RBP12.2□□□□□ -0.46
APTX-216ENST00000472896 MORC1Q86VD1 984 aa12.2□□□□□ -0.46
APTX-216ENST00000472896 CHD1LQ86WJ1 897 aa12.2□□□□□ -0.46
APTX-216ENST00000472896 LDHDQ86WU2 507 aa12.2□□□□□ -0.46
APTX-216ENST00000472896 ZNF710Q8N1W2 664 aa12.2□□□□□ -0.46
APTX-216ENST00000472896 AIDAQ96BJ3 306 aa12.2□□□□□ -0.46
APTX-216ENST00000472896 FEZ1Q99689 392 aa12.2□□□□□ -0.46
APTX-216ENST00000472896 TBC1D2BQ9UPU7 963 aa12.2□□□□□ -0.46
APTX-216ENST00000472896 TMEM88BA6NKF7 163 aa12.19□□□□□ -0.46
APTX-216ENST00000472896 HSPA8P11142 646 aaKnown RBP12.19□□□□□ -0.46
APTX-216ENST00000472896 CBX1P83916 185 aa12.19□□□□□ -0.46
APTX-216ENST00000472896 ABHD8Q96I13 439 aa12.19□□□□□ -0.46
APTX-216ENST00000472896 CD2BP2O95400 341 aaKnown RBP12.18□□□□□ -0.46
APTX-216ENST00000472896 MTHFSDQ2M296 383 aaKnown RBP12.18□□□□□ -0.46
APTX-216ENST00000472896 C7orf43Q8WVR3 580 aa12.18□□□□□ -0.46
APTX-216ENST00000472896 SYAP1Q96A49 352 aaPredicted RBP12.18□□□□□ -0.46
APTX-216ENST00000472896 GCC1Q96CN9 775 aa12.18□□□□□ -0.46
APTX-216ENST00000472896 L3MBTL3Q96JM7 780 aaPredicted RBP12.18□□□□□ -0.46
APTX-216ENST00000472896 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
APTX-216ENST00000472896 COL11A2P13942 1736 aaPredicted RBP12.18□□□□□ -0.46
APTX-216ENST00000472896 A0A087WZG4 1122 aa12.18□□□□□ -0.46
APTX-216ENST00000472896 HMOX1P09601 288 aa12.18□□□□□ -0.46
APTX-216ENST00000472896 SRGNP10124 158 aa12.18□□□□□ -0.46
APTX-216ENST00000472896 PRPF40BQ6NWY9 871 aaKnown RBP12.18□□□□□ -0.46
APTX-216ENST00000472896 ATF7IPQ6VMQ6 1270 aa12.18□□□□□ -0.46
APTX-216ENST00000472896 FAM184AQ8NB25 1140 aa12.18□□□□□ -0.46
APTX-216ENST00000472896 CNKSR1Q969H4 720 aa12.18□□□□□ -0.46
APTX-216ENST00000472896 DIAPH3Q9NSV4 1193 aa12.18□□□□□ -0.46
APTX-216ENST00000472896 ZBTB40Q9NUA8 1239 aa12.18□□□□□ -0.46
APTX-216ENST00000472896 SPTLC3Q9NUV7 552 aa12.18□□□□□ -0.46
APTX-216ENST00000472896 NAP1L2Q9ULW6 460 aaPredicted RBP12.18□□□□□ -0.46
APTX-216ENST00000472896 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
APTX-216ENST00000472896 MRC1P22897 1456 aa12.17□□□□□ -0.46
APTX-216ENST00000472896 IPO8O15397 1037 aaKnown RBP12.17□□□□□ -0.46
APTX-216ENST00000472896 PDIA4P13667 645 aaKnown RBP12.17□□□□□ -0.46
APTX-216ENST00000472896 GABPB1Q06547 395 aaPredicted RBP12.17□□□□□ -0.46
APTX-216ENST00000472896 NOLC1Q14978 699 aaKnown RBP eCLIP12.17□□□□□ -0.46
APTX-216ENST00000472896 EAPPQ56P03 285 aaPredicted RBP12.17□□□□□ -0.46
APTX-216ENST00000472896 STYK1Q6J9G0 422 aa12.17□□□□□ -0.46
APTX-216ENST00000472896 PDCL2Q8N4E4 241 aa12.17□□□□□ -0.46
APTX-216ENST00000472896 ARID3AQ99856 593 aa12.17□□□□□ -0.46
APTX-216ENST00000472896 TSPY26PQ9H489 355 aa12.17□□□□□ -0.46
APTX-216ENST00000472896 TMEM51Q9NW97 253 aa12.17□□□□□ -0.46
APTX-216ENST00000472896 ZNF541Q9H0D2 1346 aa12.17□□□□□ -0.46
APTX-216ENST00000472896 IQCA1LA6NCM1 817 aa12.16□□□□□ -0.46
APTX-216ENST00000472896 CDC45O75419 566 aa12.16□□□□□ -0.46
APTX-216ENST00000472896 STARD3NLO95772 234 aa12.16□□□□□ -0.46
APTX-216ENST00000472896 OLFM4Q6UX06 510 aa12.16□□□□□ -0.46
APTX-216ENST00000472896 ITPRIPQ8IWB1 547 aa12.16□□□□□ -0.46
APTX-216ENST00000472896 GPT2Q8TD30 523 aa12.16□□□□□ -0.46
APTX-216ENST00000472896 ZNF496Q96IT1 587 aaPredicted RBP12.16□□□□□ -0.46
APTX-216ENST00000472896 BCL2L13Q9BXK5 485 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms