RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 PMEPA1Q969W9 287 aa6.56□□□□□ -1.36
PRPF3-204ENST00000470824 SENP2Q9HC62 589 aa6.56□□□□□ -1.36
PRPF3-204ENST00000470824 RNF19AQ9NV58 838 aa6.56□□□□□ -1.36
PRPF3-204ENST00000470824 NLRP2Q9NX02 1062 aa6.56□□□□□ -1.36
PRPF3-204ENST00000470824 SLC35F4A4IF30 521 aa6.55□□□□□ -1.36
PRPF3-204ENST00000470824 SOBPA7XYQ1 873 aa6.55□□□□□ -1.36
PRPF3-204ENST00000470824 SCAMP3O14828 347 aaKnown RBP6.55□□□□□ -1.36
PRPF3-204ENST00000470824 INSM1Q01101 510 aaPredicted RBP6.55□□□□□ -1.36
PRPF3-204ENST00000470824 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.55□□□□□ -1.36
PRPF3-204ENST00000470824 TMEM87AQ8NBN3 555 aa6.55□□□□□ -1.36
PRPF3-204ENST00000470824 KIFC2Q96AC6 838 aa6.55□□□□□ -1.36
PRPF3-204ENST00000470824 CCDC74AQ96AQ1 378 aa6.55□□□□□ -1.36
PRPF3-204ENST00000470824 NUCKS1Q9H1E3 243 aaKnown RBP6.55□□□□□ -1.36
PRPF3-204ENST00000470824 ABI2Q9NYB9 513 aaPredicted RBP6.55□□□□□ -1.36
PRPF3-204ENST00000470824 TMEM63CQ9P1W3 806 aa6.55□□□□□ -1.36
PRPF3-204ENST00000470824 STK17AQ9UEE5 414 aa6.55□□□□□ -1.36
PRPF3-204ENST00000470824 AK5Q9Y6K8 562 aa6.55□□□□□ -1.36
PRPF3-204ENST00000470824 GIPC1O14908 333 aa6.54□□□□□ -1.36
PRPF3-204ENST00000470824 KHNYNO15037 678 aaKnown RBP6.54□□□□□ -1.36
PRPF3-204ENST00000470824 SFSWAPQ12872 951 aaKnown RBP6.54□□□□□ -1.36
PRPF3-204ENST00000470824 LAMC2Q13753 1193 aa6.54□□□□□ -1.36
PRPF3-204ENST00000470824 CCINQ13939 588 aa6.54□□□□□ -1.36
PRPF3-204ENST00000470824 USPL1Q5W0Q7 1092 aa6.54□□□□□ -1.36
PRPF3-204ENST00000470824 GMCL1Q96IK5 515 aa6.54□□□□□ -1.36
PRPF3-204ENST00000470824 EFSO43281 561 aa6.53□□□□□ -1.36
PRPF3-204ENST00000470824 WIPF1O43516 503 aa6.53□□□□□ -1.36
PRPF3-204ENST00000470824 SASH3O75995 380 aa6.53□□□□□ -1.36
PRPF3-204ENST00000470824 EIF4BP23588 611 aaKnown RBP6.53□□□□□ -1.36
PRPF3-204ENST00000470824 TNP2Q05952 138 aa6.53□□□□□ -1.36
PRPF3-204ENST00000470824 DBN1Q16643 649 aa6.53□□□□□ -1.36
PRPF3-204ENST00000470824 TRIM22Q8IYM9 498 aa6.53□□□□□ -1.36
PRPF3-204ENST00000470824 CCDC155Q8N6L0 562 aa6.53□□□□□ -1.36
PRPF3-204ENST00000470824 C1orf127Q8N9H9 656 aa6.53□□□□□ -1.36
PRPF3-204ENST00000470824 TRIM47Q96LD4 638 aa6.53□□□□□ -1.36
PRPF3-204ENST00000470824 CNTN3Q9P232 1028 aa6.53□□□□□ -1.36
PRPF3-204ENST00000470824 DCDC2BA2VCK2 349 aa6.52□□□□□ -1.37
PRPF3-204ENST00000470824 TERTO14746 1132 aaKnown RBP6.52□□□□□ -1.37
PRPF3-204ENST00000470824 THBS1P07996 1170 aa6.52□□□□□ -1.37
PRPF3-204ENST00000470824 MAPTP10636 758 aaKnown RBP6.52□□□□□ -1.37
PRPF3-204ENST00000470824 CES1P23141 567 aa6.52□□□□□ -1.37
PRPF3-204ENST00000470824 LDLRAD1Q5T700 205 aa6.52□□□□□ -1.37
PRPF3-204ENST00000470824 GALNT12Q8IXK2 581 aa6.52□□□□□ -1.37
PRPF3-204ENST00000470824 EPS8L3Q8TE67 593 aaKnown RBP6.52□□□□□ -1.37
PRPF3-204ENST00000470824 GSX2Q9BZM3 304 aa6.52□□□□□ -1.37
PRPF3-204ENST00000470824 CHRDQ9H2X0 955 aa6.52□□□□□ -1.37
PRPF3-204ENST00000470824 EFCC1Q9HA90 598 aa6.52□□□□□ -1.37
PRPF3-204ENST00000470824 MARK1Q9P0L2 795 aa6.52□□□□□ -1.37
PRPF3-204ENST00000470824 EREGO14944 169 aa6.51□□□□□ -1.37
PRPF3-204ENST00000470824 POLR3DP05423 398 aaPredicted RBP6.51□□□□□ -1.37
PRPF3-204ENST00000470824 TARSP26639 723 aaKnown RBP6.51□□□□□ -1.37
PRPF3-204ENST00000470824 UBAP2LQ14157 1087 aaKnown RBP6.51□□□□□ -1.37
PRPF3-204ENST00000470824 KRT25Q7Z3Z0 450 aa6.51□□□□□ -1.37
PRPF3-204ENST00000470824 PNMA5Q96PV4 448 aa6.51□□□□□ -1.37
PRPF3-204ENST00000470824 METTL5Q9NRN9 209 aaKnown RBP6.51□□□□□ -1.37
PRPF3-204ENST00000470824 PHF24Q9UPV7 400 aa6.51□□□□□ -1.37
PRPF3-204ENST00000470824 PHF20L1A8MW92 1017 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 BNIP3LO60238 219 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 GADD45BO75293 160 aaPredicted RBP6.5□□□□□ -1.37
PRPF3-204ENST00000470824 RARAP10276 462 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 EDN3P14138 238 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 ITGA6P23229 1130 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 IRS1P35568 1242 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 LCE2CQ5TA81 110 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 PI16Q6UXB8 463 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 RNF34Q969K3 372 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 CRELD1Q96HD1 420 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 SRCIN1Q9C0H9 1055 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 C12orf49Q9H741 205 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 NPHS2Q9NP85 383 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 NDFIP2Q9NV92 336 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 CUEDC1Q9NWM3 386 aaPredicted RBP6.5□□□□□ -1.37
PRPF3-204ENST00000470824 PPP4R2Q9NY27 417 aa6.5□□□□□ -1.37
PRPF3-204ENST00000470824 MMP20O60882 483 aa6.49□□□□□ -1.37
PRPF3-204ENST00000470824 PSAPP07602 524 aa6.49□□□□□ -1.37
PRPF3-204ENST00000470824 ERCC5P28715 1186 aaPredicted RBP6.49□□□□□ -1.37
PRPF3-204ENST00000470824 HDLBPQ00341 1268 aaKnown RBP6.49□□□□□ -1.37
PRPF3-204ENST00000470824 SPEM2Q0P670 501 aa6.49□□□□□ -1.37
PRPF3-204ENST00000470824 FOXR1Q6PIV2 292 aa6.49□□□□□ -1.37
PRPF3-204ENST00000470824 OR13H1Q8NG92 308 aa6.49□□□□□ -1.37
PRPF3-204ENST00000470824 OSBPL7Q9BZF2 842 aa6.49□□□□□ -1.37
PRPF3-204ENST00000470824 STRN4Q9NRL3 753 aa6.49□□□□□ -1.37
PRPF3-204ENST00000470824 FAM8A1Q9UBU6 413 aa6.49□□□□□ -1.37
PRPF3-204ENST00000470824 ATXN7L1Q9ULK2 861 aaPredicted RBP6.49□□□□□ -1.37
PRPF3-204ENST00000470824 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.49□□□□□ -1.37
PRPF3-204ENST00000470824 CYP2E1P05181 493 aaPredicted RBP6.48□□□□□ -1.37
PRPF3-204ENST00000470824 CTSHP09668 335 aa6.48□□□□□ -1.37
PRPF3-204ENST00000470824 NFKB1P19838 968 aa6.48□□□□□ -1.37
PRPF3-204ENST00000470824 ZNF76P36508 570 aa6.48□□□□□ -1.37
PRPF3-204ENST00000470824 ZC3H6P61129 1189 aaKnown RBP6.48□□□□□ -1.37
PRPF3-204ENST00000470824 NEUROD1Q13562 356 aa6.48□□□□□ -1.37
PRPF3-204ENST00000470824 KIAA0319Q5VV43 1072 aa6.48□□□□□ -1.37
PRPF3-204ENST00000470824 C9orf131Q5VYM1 1079 aa6.48□□□□□ -1.37
PRPF3-204ENST00000470824 GTPBP3Q969Y2 492 aaKnown RBP6.48□□□□□ -1.37
PRPF3-204ENST00000470824 ZNF837Q96EG3 531 aaPredicted RBP6.48□□□□□ -1.37
PRPF3-204ENST00000470824 ABHD17AQ96GS6 310 aa6.48□□□□□ -1.37
PRPF3-204ENST00000470824 C8orf37Q96NL8 207 aa6.48□□□□□ -1.37
PRPF3-204ENST00000470824 TRERF1Q96PN7 1200 aa6.48□□□□□ -1.37
PRPF3-204ENST00000470824 BCO2Q9BYV7 579 aa6.48□□□□□ -1.37
PRPF3-204ENST00000470824 SUV39H2Q9H5I1 410 aa6.48□□□□□ -1.37
PRPF3-204ENST00000470824 TLR7Q9NYK1 1049 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms