RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 INTS3Q68E01 1043 aaKnown RBP18.88■□□□□ 0.61
CDC42SE1-203ENST00000470278 H0YIN7 160 aa18.87■□□□□ 0.61
CDC42SE1-203ENST00000470278 IRS4O14654 1257 aaPredicted RBP18.87■□□□□ 0.61
CDC42SE1-203ENST00000470278 SRGNP10124 158 aa18.87■□□□□ 0.61
CDC42SE1-203ENST00000470278 UBE3BQ7Z3V4 1068 aa18.87■□□□□ 0.61
CDC42SE1-203ENST00000470278 SYNE4Q8N205 404 aa18.87■□□□□ 0.61
CDC42SE1-203ENST00000470278 NLRP3Q96P20 1036 aa18.87■□□□□ 0.61
CDC42SE1-203ENST00000470278 HCLS1P14317 486 aaPredicted RBP18.86■□□□□ 0.61
CDC42SE1-203ENST00000470278 STYK1Q6J9G0 422 aa18.86■□□□□ 0.61
CDC42SE1-203ENST00000470278 C2CD5Q86YS7 1000 aa18.86■□□□□ 0.61
CDC42SE1-203ENST00000470278 PLA2G12BQ9BX93 195 aa18.86■□□□□ 0.61
CDC42SE1-203ENST00000470278 MS4A1P11836 297 aa18.85■□□□□ 0.61
CDC42SE1-203ENST00000470278 C3orf67Q6ZVT6 689 aa18.85■□□□□ 0.61
CDC42SE1-203ENST00000470278 FTSJ3Q8IY81 847 aaKnown RBP18.85■□□□□ 0.61
CDC42SE1-203ENST00000470278 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.85■□□□□ 0.61
CDC42SE1-203ENST00000470278 MASTLQ96GX5 879 aa18.85■□□□□ 0.61
CDC42SE1-203ENST00000470278 RRAGCQ9HB90 399 aa18.85■□□□□ 0.61
CDC42SE1-203ENST00000470278 PDE8AO60658 829 aa18.84■□□□□ 0.61
CDC42SE1-203ENST00000470278 NPR1P16066 1061 aa18.84■□□□□ 0.61
CDC42SE1-203ENST00000470278 HOXA10P31260 410 aaPredicted RBP18.84■□□□□ 0.61
CDC42SE1-203ENST00000470278 SF3B3Q15393 1217 aaKnown RBP18.84■□□□□ 0.61
CDC42SE1-203ENST00000470278 RTL5Q5HYW3 569 aaPredicted RBP18.84■□□□□ 0.61
CDC42SE1-203ENST00000470278 DZIP1LQ8IYY4 767 aaKnown RBP18.84■□□□□ 0.61
CDC42SE1-203ENST00000470278 C9orf78Q9NZ63 289 aaPredicted RBP18.84■□□□□ 0.61
CDC42SE1-203ENST00000470278 TNNQ9UQP3 1299 aa18.84■□□□□ 0.61
CDC42SE1-203ENST00000470278 RTL9Q8NET4 1388 aa18.83■□□□□ 0.61
CDC42SE1-203ENST00000470278 KDM2BQ8NHM5 1336 aa18.83■□□□□ 0.61
CDC42SE1-203ENST00000470278 ZC3H4Q9UPT8 1303 aaKnown RBP18.83■□□□□ 0.61
CDC42SE1-203ENST00000470278 POTECB2RU33 542 aa18.83■□□□□ 0.6
CDC42SE1-203ENST00000470278 TTLL6Q8N841 843 aa18.83■□□□□ 0.6
CDC42SE1-203ENST00000470278 CLUAP1Q96AJ1 413 aa18.83■□□□□ 0.6
CDC42SE1-203ENST00000470278 USP44Q9H0E7 712 aa18.83■□□□□ 0.6
CDC42SE1-203ENST00000470278 NBPF7P0C2Y1 421 aaPredicted RBP18.82■□□□□ 0.6
CDC42SE1-203ENST00000470278 RLBP1P12271 317 aa18.82■□□□□ 0.6
CDC42SE1-203ENST00000470278 LMNB1P20700 586 aa18.82■□□□□ 0.6
CDC42SE1-203ENST00000470278 CTSWP56202 376 aa18.82■□□□□ 0.6
CDC42SE1-203ENST00000470278 FSTL1Q12841 308 aa18.82■□□□□ 0.6
CDC42SE1-203ENST00000470278 TMEM57Q8N5G2 664 aa18.81■□□□□ 0.6
CDC42SE1-203ENST00000470278 JMYQ8N9B5 988 aa18.81■□□□□ 0.6
CDC42SE1-203ENST00000470278 JARID2Q92833 1246 aaPredicted RBP18.81■□□□□ 0.6
CDC42SE1-203ENST00000470278 RPGRQ92834 1020 aaKnown RBP18.81■□□□□ 0.6
CDC42SE1-203ENST00000470278 CNKSR1Q969H4 720 aa18.81■□□□□ 0.6
CDC42SE1-203ENST00000470278 CRAMP1Q96RY5 1269 aa18.81■□□□□ 0.6
CDC42SE1-203ENST00000470278 ALDH1B1P30837 517 aa18.8■□□□□ 0.6
CDC42SE1-203ENST00000470278 PDE3AQ14432 1141 aa18.8■□□□□ 0.6
CDC42SE1-203ENST00000470278 CCDC152Q4G0S7 254 aa18.8■□□□□ 0.6
CDC42SE1-203ENST00000470278 RBM17Q96I25 401 aaKnown RBP18.8■□□□□ 0.6
CDC42SE1-203ENST00000470278 LRRC37AA6NMS7 1700 aa18.8■□□□□ 0.6
CDC42SE1-203ENST00000470278 GLTPD2A6NH11 291 aa18.79■□□□□ 0.6
CDC42SE1-203ENST00000470278 RRP1P56182 461 aaKnown RBP18.79■□□□□ 0.6
CDC42SE1-203ENST00000470278 ZNF622Q969S3 477 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDC42SE1-203ENST00000470278 KLRG1Q96E93 195 aa18.79■□□□□ 0.6
CDC42SE1-203ENST00000470278 PLIN1O60240 522 aa18.78■□□□□ 0.6
CDC42SE1-203ENST00000470278 CSF1RP07333 972 aa18.78■□□□□ 0.6
CDC42SE1-203ENST00000470278 UBTFL1P0CB47 393 aaPredicted RBP18.78■□□□□ 0.6
CDC42SE1-203ENST00000470278 FOXO4P98177 505 aa18.78■□□□□ 0.6
CDC42SE1-203ENST00000470278 PRPF40BQ6NWY9 871 aaKnown RBP18.78■□□□□ 0.6
CDC42SE1-203ENST00000470278 DDX46Q7L014 1031 aaKnown RBP18.78■□□□□ 0.6
CDC42SE1-203ENST00000470278 TTLL11Q8NHH1 800 aa18.78■□□□□ 0.6
CDC42SE1-203ENST00000470278 KAZALD1Q96I82 304 aa18.78■□□□□ 0.6
CDC42SE1-203ENST00000470278 MEIS3Q99687 375 aa18.78■□□□□ 0.6
CDC42SE1-203ENST00000470278 HDAC5Q9UQL6 1122 aa18.78■□□□□ 0.6
CDC42SE1-203ENST00000470278 COL4A1P02462 1669 aa18.78■□□□□ 0.6
CDC42SE1-203ENST00000470278 GNAI3P08754 354 aa18.77■□□□□ 0.6
CDC42SE1-203ENST00000470278 RABL6Q3YEC7 729 aaPredicted RBP18.77■□□□□ 0.6
CDC42SE1-203ENST00000470278 ITPRIPQ8IWB1 547 aa18.77■□□□□ 0.6
CDC42SE1-203ENST00000470278 PANK1Q8TE04 598 aa18.77■□□□□ 0.6
CDC42SE1-203ENST00000470278 SUCLG2Q96I99 432 aa18.77■□□□□ 0.6
CDC42SE1-203ENST00000470278 SNED1Q8TER0 1413 aa18.76■□□□□ 0.59
CDC42SE1-203ENST00000470278 ADAMTSL1Q8N6G6 1762 aa18.76■□□□□ 0.59
CDC42SE1-203ENST00000470278 GRAPQ13588 217 aa18.76■□□□□ 0.59
CDC42SE1-203ENST00000470278 MVPQ14764 893 aaKnown RBP18.76■□□□□ 0.59
CDC42SE1-203ENST00000470278 GRAPLQ8TC17 118 aaPredicted RBP18.76■□□□□ 0.59
CDC42SE1-203ENST00000470278 LTBP3Q9NS15 1303 aa18.75■□□□□ 0.59
CDC42SE1-203ENST00000470278 TAF1P21675 1872 aa18.75■□□□□ 0.59
CDC42SE1-203ENST00000470278 C21orf2O43822 256 aa18.75■□□□□ 0.59
CDC42SE1-203ENST00000470278 EPHA10Q5JZY3 1008 aa18.75■□□□□ 0.59
CDC42SE1-203ENST00000470278 TMC4Q7Z404 712 aa18.75■□□□□ 0.59
CDC42SE1-203ENST00000470278 C16orf71Q8IYS4 520 aaPredicted RBP18.75■□□□□ 0.59
CDC42SE1-203ENST00000470278 GREM2Q9H772 168 aa18.75■□□□□ 0.59
CDC42SE1-203ENST00000470278 BBOX1O75936 387 aa18.74■□□□□ 0.59
CDC42SE1-203ENST00000470278 FAM161AQ3B820 660 aa18.74■□□□□ 0.59
CDC42SE1-203ENST00000470278 SOGA3Q5TF21 947 aa18.74■□□□□ 0.59
CDC42SE1-203ENST00000470278 SMC1BQ8NDV3 1235 aa18.74■□□□□ 0.59
CDC42SE1-203ENST00000470278 C7orf43Q8WVR3 580 aa18.74■□□□□ 0.59
CDC42SE1-203ENST00000470278 BICC1Q9H694 974 aaKnown RBP18.74■□□□□ 0.59
CDC42SE1-203ENST00000470278 ZNF219Q9P2Y4 722 aaPredicted RBP18.74■□□□□ 0.59
CDC42SE1-203ENST00000470278 DDX19BQ9UMR2 479 aa18.74■□□□□ 0.59
CDC42SE1-203ENST00000470278 SCN4AP35499 1836 aa18.74■□□□□ 0.59
CDC42SE1-203ENST00000470278 SPEF2Q9C093 1822 aa18.73■□□□□ 0.59
CDC42SE1-203ENST00000470278 ZBTB7BO15156 539 aaPredicted RBP18.73■□□□□ 0.59
CDC42SE1-203ENST00000470278 C20orf194Q5TEA3 1177 aa18.73■□□□□ 0.59
CDC42SE1-203ENST00000470278 LMBR1LQ6UX01 489 aa18.73■□□□□ 0.59
CDC42SE1-203ENST00000470278 ANKRD44Q8N8A2 993 aa18.73■□□□□ 0.59
CDC42SE1-203ENST00000470278 CDC5LQ99459 802 aaKnown RBP18.73■□□□□ 0.59
CDC42SE1-203ENST00000470278 COL4A5P29400 1685 aa18.73■□□□□ 0.59
CDC42SE1-203ENST00000470278 LTBP1Q14766 1721 aa18.72■□□□□ 0.59
CDC42SE1-203ENST00000470278 PPEF1O14829 653 aaPredicted RBP18.72■□□□□ 0.59
CDC42SE1-203ENST00000470278 VEGFAP15692 232 aaPredicted RBP18.72■□□□□ 0.59
CDC42SE1-203ENST00000470278 ITGA6P23229 1130 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms