RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 C20orf204Q6ZNR8 217 aa9.68□□□□□ -0.86
UBE3C-204ENST00000469336 LRFN2Q9ULH4 789 aa9.68□□□□□ -0.86
UBE3C-204ENST00000469336 USP20Q9Y2K6 914 aa9.68□□□□□ -0.86
UBE3C-204ENST00000469336 NFKB1P19838 968 aa9.67□□□□□ -0.86
UBE3C-204ENST00000469336 KRT25Q7Z3Z0 450 aa9.67□□□□□ -0.86
UBE3C-204ENST00000469336 NUDT8Q8WV74 236 aa9.67□□□□□ -0.86
UBE3C-204ENST00000469336 VTI1AQ96AJ9 217 aa9.67□□□□□ -0.86
UBE3C-204ENST00000469336 NID1P14543 1247 aa9.66□□□□□ -0.86
UBE3C-204ENST00000469336 INPP5BP32019 993 aa9.66□□□□□ -0.86
UBE3C-204ENST00000469336 SCNN1AP37088 669 aa9.66□□□□□ -0.86
UBE3C-204ENST00000469336 MKNK1Q9BUB5 465 aa9.66□□□□□ -0.86
UBE3C-204ENST00000469336 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.66□□□□□ -0.862e-14■■■■■ 29.8
UBE3C-204ENST00000469336 EGFL7Q9UHF1 273 aa9.66□□□□□ -0.86
UBE3C-204ENST00000469336 SLC6A14Q9UN76 642 aa9.66□□□□□ -0.86
UBE3C-204ENST00000469336 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.66□□□□□ -0.86
UBE3C-204ENST00000469336 SPATA31C1P0DKV0 1188 aa9.65□□□□□ -0.86
UBE3C-204ENST00000469336 CCINQ13939 588 aa9.65□□□□□ -0.86
UBE3C-204ENST00000469336 PNMA5Q96PV4 448 aa9.65□□□□□ -0.86
UBE3C-204ENST00000469336 GZF1Q9H116 711 aaPredicted RBP9.65□□□□□ -0.86
UBE3C-204ENST00000469336 DNAJB12Q9NXW2 375 aaKnown RBP9.65□□□□□ -0.86
UBE3C-204ENST00000469336 PODXL2Q9NZ53 605 aa9.65□□□□□ -0.86
UBE3C-204ENST00000469336 NAGPAQ9UK23 515 aa9.65□□□□□ -0.86
UBE3C-204ENST00000469336 K7ELQ4 463 aaPredicted RBP9.64□□□□□ -0.87
UBE3C-204ENST00000469336 SERPINB4P48594 390 aa9.64□□□□□ -0.87
UBE3C-204ENST00000469336 DOC2BQ14184 412 aa9.64□□□□□ -0.87
UBE3C-204ENST00000469336 ZFATQ9P243 1243 aa9.64□□□□□ -0.87
UBE3C-204ENST00000469336 SEPT3Q9UH03 358 aa9.64□□□□□ -0.87
UBE3C-204ENST00000469336 NISCHQ9Y2I1 1504 aa9.63□□□□□ -0.87
UBE3C-204ENST00000469336 MICAL2O94851 1124 aa9.63□□□□□ -0.87
UBE3C-204ENST00000469336 TARSP26639 723 aaKnown RBP9.63□□□□□ -0.87
UBE3C-204ENST00000469336 GRIK4Q16099 956 aa9.63□□□□□ -0.87
UBE3C-204ENST00000469336 C11orf91Q3C1V1 193 aa9.63□□□□□ -0.87
UBE3C-204ENST00000469336 CAPN12Q6ZSI9 719 aa9.63□□□□□ -0.87
UBE3C-204ENST00000469336 SND1Q7KZF4 910 aaKnown RBP eCLIP9.63□□□□□ -0.87
UBE3C-204ENST00000469336 JPH1Q9HDC5 661 aaPredicted RBP9.63□□□□□ -0.87
UBE3C-204ENST00000469336 PSAPL1Q6NUJ1 521 aa9.62□□□□□ -0.87
UBE3C-204ENST00000469336 MYO19Q96H55 970 aa9.62□□□□□ -0.87
UBE3C-204ENST00000469336 PRDM6Q9NQX0 595 aa9.62□□□□□ -0.87
UBE3C-204ENST00000469336 SOWAHDA6NJG2 315 aa9.61□□□□□ -0.87
UBE3C-204ENST00000469336 OPLAHO14841 1288 aa9.61□□□□□ -0.87
UBE3C-204ENST00000469336 LILRB5O75023 590 aa9.61□□□□□ -0.87
UBE3C-204ENST00000469336 SASH3O75995 380 aa9.61□□□□□ -0.87
UBE3C-204ENST00000469336 PRRT3Q5FWE3 981 aa9.61□□□□□ -0.87
UBE3C-204ENST00000469336 COX20Q5RI15 118 aa9.61□□□□□ -0.87
UBE3C-204ENST00000469336 TRAPPC3LQ5T215 181 aa9.61□□□□□ -0.87
UBE3C-204ENST00000469336 C16orf46Q6P387 395 aa9.61□□□□□ -0.87
UBE3C-204ENST00000469336 HELQQ8TDG4 1101 aa9.61□□□□□ -0.87
UBE3C-204ENST00000469336 GTF3C2Q8WUA4 911 aaPredicted RBP9.61□□□□□ -0.87
UBE3C-204ENST00000469336 IFT43Q96FT9 208 aa9.61□□□□□ -0.87
UBE3C-204ENST00000469336 SAP130Q9H0E3 1048 aa9.61□□□□□ -0.87
UBE3C-204ENST00000469336 ZBTB42B2RXF5 422 aa9.6□□□□□ -0.87
UBE3C-204ENST00000469336 GATA4P43694 442 aa9.6□□□□□ -0.87
UBE3C-204ENST00000469336 ARSDP51689 593 aa9.6□□□□□ -0.87
UBE3C-204ENST00000469336 MLLT1Q03111 559 aaPredicted RBP9.6□□□□□ -0.87
UBE3C-204ENST00000469336 PLAURQ03405 335 aa9.6□□□□□ -0.87
UBE3C-204ENST00000469336 TRIM28Q13263 835 aaKnown RBP9.6□□□□□ -0.87
UBE3C-204ENST00000469336 SF3B2Q13435 895 aaKnown RBP9.6□□□□□ -0.87
UBE3C-204ENST00000469336 SPDYE3A6NKU9 549 aa9.59□□□□□ -0.87
UBE3C-204ENST00000469336 ICMTO60725 284 aa9.59□□□□□ -0.87
UBE3C-204ENST00000469336 ABL1P00519 1130 aa9.59□□□□□ -0.87
UBE3C-204ENST00000469336 CPB1P15086 417 aa9.59□□□□□ -0.87
UBE3C-204ENST00000469336 EPB42P16452 691 aa9.59□□□□□ -0.87
UBE3C-204ENST00000469336 FAM26DQ5JW98 314 aa9.59□□□□□ -0.87
UBE3C-204ENST00000469336 TMCO4Q5TGY1 634 aa9.59□□□□□ -0.87
UBE3C-204ENST00000469336 TREML1Q86YW5 311 aa9.59□□□□□ -0.87
UBE3C-204ENST00000469336 AFF1P51825 1210 aaKnown RBP9.58□□□□□ -0.88
UBE3C-204ENST00000469336 ZNF211Q13398 564 aaPredicted RBP9.58□□□□□ -0.88
UBE3C-204ENST00000469336 NAA30Q147X3 362 aaPredicted RBP9.58□□□□□ -0.88
UBE3C-204ENST00000469336 FAM35AQ86V20 835 aa9.58□□□□□ -0.88
UBE3C-204ENST00000469336 RGL4Q8IZJ4 473 aa9.58□□□□□ -0.88
UBE3C-204ENST00000469336 RTCBQ9Y3I0 505 aaKnown RBP9.58□□□□□ -0.88
UBE3C-204ENST00000469336 APBA3O96018 575 aa9.57□□□□□ -0.88
UBE3C-204ENST00000469336 RARAP10276 462 aa9.57□□□□□ -0.88
UBE3C-204ENST00000469336 ITGB7P26010 798 aa9.57□□□□□ -0.88
UBE3C-204ENST00000469336 HFE2Q6ZVN8 426 aa9.57□□□□□ -0.88
UBE3C-204ENST00000469336 DHX32Q7L7V1 743 aaKnown RBP9.57□□□□□ -0.88
UBE3C-204ENST00000469336 CMTR1Q8N1G2 835 aaKnown RBP9.57□□□□□ -0.88
UBE3C-204ENST00000469336 A0A0A0MRY4 1105 aa9.56□□□□□ -0.88
UBE3C-204ENST00000469336 H3BRB1 525 aa9.56□□□□□ -0.88
UBE3C-204ENST00000469336 FKBP4Q02790 459 aaKnown RBP eCLIP9.56□□□□□ -0.88
UBE3C-204ENST00000469336 ETFBKMTQ8IXQ9 262 aa9.56□□□□□ -0.88
UBE3C-204ENST00000469336 DMRTC2Q8IXT2 367 aaPredicted RBP9.56□□□□□ -0.88
UBE3C-204ENST00000469336 TUT1Q9H6E5 874 aaKnown RBP9.56□□□□□ -0.88
UBE3C-204ENST00000469336 EFCC1Q9HA90 598 aa9.56□□□□□ -0.88
UBE3C-204ENST00000469336 CCDC9Q9Y3X0 531 aaKnown RBP9.56□□□□□ -0.88
UBE3C-204ENST00000469336 TNFRSF10BO14763 440 aa9.55□□□□□ -0.88
UBE3C-204ENST00000469336 RGS9O75916 674 aaPredicted RBP9.55□□□□□ -0.88
UBE3C-204ENST00000469336 NPR3P17342 541 aa9.55□□□□□ -0.88
UBE3C-204ENST00000469336 PERM1Q5SV97 790 aa9.55□□□□□ -0.88
UBE3C-204ENST00000469336 SHISA2Q6UWI4 295 aa9.55□□□□□ -0.88
UBE3C-204ENST00000469336 GLYCTKQ8IVS8 523 aa9.55□□□□□ -0.88
UBE3C-204ENST00000469336 LPIN3Q9BQK8 851 aa9.55□□□□□ -0.88
UBE3C-204ENST00000469336 SEMA6BQ9H3T3 888 aa9.55□□□□□ -0.88
UBE3C-204ENST00000469336 ANO2Q9NQ90 1003 aa9.54□□□□□ -0.88
UBE3C-204ENST00000469336 TPSG1Q9NRR2 321 aa9.54□□□□□ -0.88
UBE3C-204ENST00000469336 XYLBO75191 536 aa9.53□□□□□ -0.88
UBE3C-204ENST00000469336 MAP3K6O95382 1288 aa9.53□□□□□ -0.88
UBE3C-204ENST00000469336 SELPP16109 830 aa9.53□□□□□ -0.88
UBE3C-204ENST00000469336 MTMR3Q13615 1198 aa9.53□□□□□ -0.88
UBE3C-204ENST00000469336 GRIK5Q16478 980 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms