RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ZNF777Q9ULD5 760 aaPredicted RBP8.69□□□□□ -1.02
SMC4-207ENST00000467263 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.68□□□□□ -1.02
SMC4-207ENST00000467263 RGS9O75916 674 aaPredicted RBP8.68□□□□□ -1.02
SMC4-207ENST00000467263 NRG1Q02297 640 aaPredicted RBP8.68□□□□□ -1.02
SMC4-207ENST00000467263 HIF1AQ16665 826 aa8.68□□□□□ -1.02
SMC4-207ENST00000467263 PERM1Q5SV97 790 aa8.68□□□□□ -1.02
SMC4-207ENST00000467263 TXNRD3Q86VQ6 643 aa8.68□□□□□ -1.02
SMC4-207ENST00000467263 KRTAP9-2Q9BYQ4 174 aa8.68□□□□□ -1.02
SMC4-207ENST00000467263 FAM196BA6NMK8 535 aa8.67□□□□□ -1.02
SMC4-207ENST00000467263 SASH3O75995 380 aa8.67□□□□□ -1.02
SMC4-207ENST00000467263 RAC1P63000 192 aa8.67□□□□□ -1.02
SMC4-207ENST00000467263 SSBP4Q9BWG4 385 aaPredicted RBP8.67□□□□□ -1.02
SMC4-207ENST00000467263 WEE1P30291 646 aa8.66□□□□□ -1.02
SMC4-207ENST00000467263 EFCC1Q9HA90 598 aa8.66□□□□□ -1.02
SMC4-207ENST00000467263 LRFN2Q9ULH4 789 aa8.66□□□□□ -1.02
SMC4-207ENST00000467263 OPLAHO14841 1288 aa8.65□□□□□ -1.02
SMC4-207ENST00000467263 MICAL2O94851 1124 aa8.65□□□□□ -1.02
SMC4-207ENST00000467263 CDCA8Q53HL2 280 aa8.65□□□□□ -1.02
SMC4-207ENST00000467263 MSL1Q68DK7 614 aa8.65□□□□□ -1.02
SMC4-207ENST00000467263 HFE2Q6ZVN8 426 aa8.65□□□□□ -1.02
SMC4-207ENST00000467263 DHX32Q7L7V1 743 aaKnown RBP8.65□□□□□ -1.02
SMC4-207ENST00000467263 TP53INP1Q96A56 240 aa8.65□□□□□ -1.02
SMC4-207ENST00000467263 VRTNQ9H8Y1 702 aa8.65□□□□□ -1.02
SMC4-207ENST00000467263 MAP3K6O95382 1288 aa8.64□□□□□ -1.03
SMC4-207ENST00000467263 H2AFB1P0C5Y9 115 aa8.64□□□□□ -1.03
SMC4-207ENST00000467263 H2AFB2P0C5Z0 115 aa8.64□□□□□ -1.03
SMC4-207ENST00000467263 ARTNQ5T4W7 220 aa8.64□□□□□ -1.03
SMC4-207ENST00000467263 TRPM4Q8TD43 1214 aa8.64□□□□□ -1.03
SMC4-207ENST00000467263 USP21Q9UK80 565 aa8.64□□□□□ -1.03
SMC4-207ENST00000467263 KRTAP9-6A0A140TA67 174 aa8.63□□□□□ -1.03
SMC4-207ENST00000467263 DEAF1O75398 565 aaPredicted RBP8.63□□□□□ -1.03
SMC4-207ENST00000467263 ARSDP51689 593 aa8.63□□□□□ -1.03
SMC4-207ENST00000467263 CFAP70Q5T0N1 1121 aa8.63□□□□□ -1.03
SMC4-207ENST00000467263 RARAP10276 462 aa8.62□□□□□ -1.03
SMC4-207ENST00000467263 ZFP64Q9NPA5 681 aa8.62□□□□□ -1.03
SMC4-207ENST00000467263 EPB42P16452 691 aa8.61□□□□□ -1.03
SMC4-207ENST00000467263 NOS3P29474 1203 aa8.61□□□□□ -1.03
SMC4-207ENST00000467263 GPLD1P80108 840 aa8.61□□□□□ -1.03
SMC4-207ENST00000467263 C11orf91Q3C1V1 193 aa8.61□□□□□ -1.03
SMC4-207ENST00000467263 FBXO11Q86XK2 927 aa8.61□□□□□ -1.03
SMC4-207ENST00000467263 WFDC12Q8WWY7 111 aa8.61□□□□□ -1.03
SMC4-207ENST00000467263 MYO19Q96H55 970 aa8.61□□□□□ -1.03
SMC4-207ENST00000467263 SMG9Q9H0W8 520 aaKnown RBP8.61□□□□□ -1.03
SMC4-207ENST00000467263 RTCBQ9Y3I0 505 aaKnown RBP8.61□□□□□ -1.03
SMC4-207ENST00000467263 ARID3CA6NKF2 412 aa8.6□□□□□ -1.03
SMC4-207ENST00000467263 J3QW42 95 aa8.6□□□□□ -1.03
SMC4-207ENST00000467263 FOXO3O43524 673 aa8.6□□□□□ -1.03
SMC4-207ENST00000467263 IREB2P48200 963 aaKnown RBP8.6□□□□□ -1.03
SMC4-207ENST00000467263 FKBP5Q13451 457 aaPredicted RBP8.6□□□□□ -1.03
SMC4-207ENST00000467263 FAM26DQ5JW98 314 aa8.6□□□□□ -1.03
SMC4-207ENST00000467263 ELMSAN1Q6PJG2 1045 aa8.6□□□□□ -1.03
SMC4-207ENST00000467263 MEGF10Q96KG7 1140 aa8.6□□□□□ -1.03
SMC4-207ENST00000467263 FRRS1LQ9P0K9 344 aa8.6□□□□□ -1.03
SMC4-207ENST00000467263 TIMELESSQ9UNS1 1208 aa8.6□□□□□ -1.03
SMC4-207ENST00000467263 WFDC8Q8IUA0 241 aa8.59□□□□□ -1.03
SMC4-207ENST00000467263 RGL4Q8IZJ4 473 aa8.59□□□□□ -1.03
SMC4-207ENST00000467263 PRIMPOLQ96LW4 560 aa8.59□□□□□ -1.03
SMC4-207ENST00000467263 COX20Q5RI15 118 aa8.58□□□□□ -1.04
SMC4-207ENST00000467263 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
SMC4-207ENST00000467263 KCNMB2Q9Y691 235 aa8.58□□□□□ -1.04
SMC4-207ENST00000467263 XYLBO75191 536 aa8.57□□□□□ -1.04
SMC4-207ENST00000467263 EIF2AK2P19525 551 aaKnown RBP8.57□□□□□ -1.04
SMC4-207ENST00000467263 TREML1Q86YW5 311 aa8.57□□□□□ -1.04
SMC4-207ENST00000467263 CMTR1Q8N1G2 835 aaKnown RBP8.57□□□□□ -1.04
SMC4-207ENST00000467263 DTWD1Q8N5C7 304 aa8.57□□□□□ -1.04
SMC4-207ENST00000467263 VTI1AQ96AJ9 217 aa8.57□□□□□ -1.04
SMC4-207ENST00000467263 TLR7Q9NYK1 1049 aaKnown RBP8.57□□□□□ -1.04
SMC4-207ENST00000467263 HYAL3O43820 417 aaPredicted RBP8.56□□□□□ -1.04
SMC4-207ENST00000467263 MMP20O60882 483 aa8.56□□□□□ -1.04
SMC4-207ENST00000467263 ALX3O95076 343 aa8.56□□□□□ -1.04
SMC4-207ENST00000467263 NRLP54845 237 aa8.56□□□□□ -1.04
SMC4-207ENST00000467263 PCSK7Q16549 785 aa8.56□□□□□ -1.04
SMC4-207ENST00000467263 CAPN12Q6ZSI9 719 aa8.56□□□□□ -1.04
SMC4-207ENST00000467263 FAM200AQ8TCP9 573 aa8.56□□□□□ -1.04
SMC4-207ENST00000467263 TTC9Q92623 222 aa8.56□□□□□ -1.04
SMC4-207ENST00000467263 NSUN5Q96P11 429 aaKnown RBP8.56□□□□□ -1.04
SMC4-207ENST00000467263 DLL1O00548 723 aa8.55□□□□□ -1.04
SMC4-207ENST00000467263 EGFRP00533 1210 aa8.55□□□□□ -1.04
SMC4-207ENST00000467263 RFX1P22670 979 aa8.55□□□□□ -1.04
SMC4-207ENST00000467263 ETFBKMTQ8IXQ9 262 aa8.55□□□□□ -1.04
SMC4-207ENST00000467263 PLD4Q96BZ4 506 aa8.55□□□□□ -1.04
SMC4-207ENST00000467263 PRMT3O60678 531 aa8.54□□□□□ -1.04
SMC4-207ENST00000467263 LRP8Q14114 963 aa8.54□□□□□ -1.04
SMC4-207ENST00000467263 TRIP4Q15650 581 aaPredicted RBP8.54□□□□□ -1.04
SMC4-207ENST00000467263 IGF2-ASQ6U949 168 aa8.54□□□□□ -1.04
SMC4-207ENST00000467263 C11orf16Q9NQ32 467 aa8.54□□□□□ -1.04
SMC4-207ENST00000467263 ZMIZ1Q9ULJ6 1067 aa8.54□□□□□ -1.04
SMC4-207ENST00000467263 NOVA2Q9UNW9 492 aaKnown RBP8.54□□□□□ -1.04
SMC4-207ENST00000467263 LOC102724428A0A0B4J2F2 783 aa8.53□□□□□ -1.04
SMC4-207ENST00000467263 SIK1P57059 783 aa8.53□□□□□ -1.04
SMC4-207ENST00000467263 OCLNQ16625 522 aa8.53□□□□□ -1.04
SMC4-207ENST00000467263 GDF6Q6KF10 455 aaPredicted RBP8.53□□□□□ -1.04
SMC4-207ENST00000467263 ERICH6Q7L0X2 663 aa8.53□□□□□ -1.04
SMC4-207ENST00000467263 FAM69CQ0P6D2 419 aa8.52□□□□□ -1.05
SMC4-207ENST00000467263 TRIM33Q9UPN9 1127 aa8.52□□□□□ -1.05
SMC4-207ENST00000467263 ADAMTSL4Q6UY14 1074 aa8.51□□□□□ -1.05
SMC4-207ENST00000467263 IL22RA1Q8N6P7 574 aa8.51□□□□□ -1.05
SMC4-207ENST00000467263 STK32AQ8WU08 396 aa8.51□□□□□ -1.05
SMC4-207ENST00000467263 SETDB1Q15047 1291 aa8.5□□□□□ -1.05
SMC4-207ENST00000467263 COL13A1Q5TAT6 717 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms