RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-216	ENST00000467134	KCNQ4	P56696	695 aa		13.52	□□□□□ -0.25
MUC1-216	ENST00000467134	IFIT5	Q13325	482 aa	Known RBP	13.52	□□□□□ -0.25
MUC1-216	ENST00000467134	USPL1	Q5W0Q7	1092 aa		13.52	□□□□□ -0.25
MUC1-216	ENST00000467134	TICAM2	Q86XR7	235 aa		13.52	□□□□□ -0.25
MUC1-216	ENST00000467134	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.52	□□□□□ -0.25
MUC1-216	ENST00000467134	JARID2	Q92833	1246 aa	Predicted RBP	13.52	□□□□□ -0.25
MUC1-216	ENST00000467134	AKT1S1	Q96B36	256 aa		13.52	□□□□□ -0.25
MUC1-216	ENST00000467134	ZNF609	O15014	1411 aa		13.51	□□□□□ -0.25
MUC1-216	ENST00000467134	ABCC12	Q96J65	1359 aa		13.51	□□□□□ -0.25
MUC1-216	ENST00000467134	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.51	□□□□□ -0.25
MUC1-216	ENST00000467134	ANKRD18B	A2A2Z9	1011 aa		13.51	□□□□□ -0.25
MUC1-216	ENST00000467134	APBB1	O00213	710 aa		13.51	□□□□□ -0.25
MUC1-216	ENST00000467134	ERC2	O15083	957 aa		13.51	□□□□□ -0.25
MUC1-216	ENST00000467134	GLRX3	O76003	335 aa	Known RBP	13.51	□□□□□ -0.25
MUC1-216	ENST00000467134	GSPT1	P15170	499 aa	Known RBP	13.51	□□□□□ -0.25
MUC1-216	ENST00000467134	SF3B3	Q15393	1217 aa	Known RBP	13.51	□□□□□ -0.25
MUC1-216	ENST00000467134	ATG9A	Q7Z3C6	839 aa		13.51	□□□□□ -0.25
MUC1-216	ENST00000467134	SETDB2	Q96T68	719 aa		13.51	□□□□□ -0.25
MUC1-216	ENST00000467134	RBM19	Q9Y4C8	960 aa	Known RBP	13.51	□□□□□ -0.25
MUC1-216	ENST00000467134	CDC45	O75419	566 aa		13.5	□□□□□ -0.25
MUC1-216	ENST00000467134	CCDC152	Q4G0S7	254 aa		13.5	□□□□□ -0.25
MUC1-216	ENST00000467134	TBC1D9B	Q66K14	1250 aa		13.5	□□□□□ -0.25
MUC1-216	ENST00000467134	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.5	□□□□□ -0.25
MUC1-216	ENST00000467134	IL1RAPL2	Q9NP60	686 aa		13.5	□□□□□ -0.25
MUC1-216	ENST00000467134	ECHDC1	Q9NTX5	307 aa		13.5	□□□□□ -0.25
MUC1-216	ENST00000467134	IFIT2	P09913	472 aa	Known RBP	13.49	□□□□□ -0.25
MUC1-216	ENST00000467134	TPTE2	Q6XPS3	522 aa		13.49	□□□□□ -0.25
MUC1-216	ENST00000467134	AMIGO3	Q86WK7	504 aa		13.49	□□□□□ -0.25
MUC1-216	ENST00000467134	PI4K2B	Q8TCG2	481 aa		13.49	□□□□□ -0.25
MUC1-216	ENST00000467134	SRP68	Q9UHB9	627 aa	Known RBP	13.49	□□□□□ -0.25
MUC1-216	ENST00000467134	CHMP3	Q9Y3E7	222 aa		13.49	□□□□□ -0.25
MUC1-216	ENST00000467134	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.49	□□□□□ -0.25
MUC1-216	ENST00000467134	RFX7	Q2KHR2	1363 aa		13.48	□□□□□ -0.25
MUC1-216	ENST00000467134	ITGA6	P23229	1130 aa		13.48	□□□□□ -0.25
MUC1-216	ENST00000467134	TNNI3K	Q59H18	835 aa		13.48	□□□□□ -0.25
MUC1-216	ENST00000467134	RTL5	Q5HYW3	569 aa	Predicted RBP	13.48	□□□□□ -0.25
MUC1-216	ENST00000467134	AACS	Q86V21	672 aa		13.48	□□□□□ -0.25
MUC1-216	ENST00000467134	SIL1	Q9H173	461 aa		13.48	□□□□□ -0.25
MUC1-216	ENST00000467134	GREM2	Q9H772	168 aa		13.48	□□□□□ -0.25
MUC1-216	ENST00000467134	AKAP2	Q9Y2D5	859 aa		13.48	□□□□□ -0.25
MUC1-216	ENST00000467134	FPGT-TNNI3K	V9GXZ4	949 aa		13.48	□□□□□ -0.25
MUC1-216	ENST00000467134	MROH5	Q6ZUA9	1318 aa		13.47	□□□□□ -0.25
MUC1-216	ENST00000467134	GYS1	P13807	737 aa		13.47	□□□□□ -0.25
MUC1-216	ENST00000467134	SDS	P20132	328 aa		13.47	□□□□□ -0.25
MUC1-216	ENST00000467134	TM4SF1	P30408	202 aa		13.47	□□□□□ -0.25
MUC1-216	ENST00000467134	TAF7L	Q5H9L4	462 aa		13.47	□□□□□ -0.25
MUC1-216	ENST00000467134	CASC1	Q6TDU7	716 aa		13.47	□□□□□ -0.25
MUC1-216	ENST00000467134	CCDC125	Q86Z20	511 aa		13.47	□□□□□ -0.25
MUC1-216	ENST00000467134	SYNE4	Q8N205	404 aa		13.47	□□□□□ -0.25
MUC1-216	ENST00000467134	KLHDC4	Q8TBB5	520 aa		13.47	□□□□□ -0.25
MUC1-216	ENST00000467134	EAF2	Q96CJ1	260 aa	Predicted RBP	13.47	□□□□□ -0.25
MUC1-216	ENST00000467134	UPF2	Q9HAU5	1272 aa	Known RBP	13.47	□□□□□ -0.25
MUC1-216	ENST00000467134	CEP126	Q9P2H0	1117 aa		13.47	□□□□□ -0.25
MUC1-216	ENST00000467134	RIPOR2	Q9Y4F9	1068 aa		13.47	□□□□□ -0.25
MUC1-216	ENST00000467134	EPB41L2	O43491	1005 aa	Known RBP	13.46	□□□□□ -0.25
MUC1-216	ENST00000467134	TFCP2	Q12800	502 aa		13.46	□□□□□ -0.25
MUC1-216	ENST00000467134	NFIX	Q14938	502 aa		13.46	□□□□□ -0.25
MUC1-216	ENST00000467134	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.46	□□□□□ -0.25
MUC1-216	ENST00000467134	NUTM1	Q86Y26	1132 aa		13.46	□□□□□ -0.25
MUC1-216	ENST00000467134	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
MUC1-216	ENST00000467134	CAMKK2	Q96RR4	588 aa		13.46	□□□□□ -0.25
MUC1-216	ENST00000467134	CDC5L	Q99459	802 aa	Known RBP	13.46	□□□□□ -0.25
MUC1-216	ENST00000467134	LRRC37A	A6NMS7	1700 aa		13.45	□□□□□ -0.26
MUC1-216	ENST00000467134	ATP5J	P18859	108 aa		13.45	□□□□□ -0.26
MUC1-216	ENST00000467134	ZNF827	Q17R98	1081 aa		13.45	□□□□□ -0.26
MUC1-216	ENST00000467134	ERFE	Q4G0M1	354 aa		13.45	□□□□□ -0.26
MUC1-216	ENST00000467134	TBC1D9	Q6ZT07	1266 aa		13.45	□□□□□ -0.26
MUC1-216	ENST00000467134	NLGN1	Q8N2Q7	840 aa		13.45	□□□□□ -0.26
MUC1-216	ENST00000467134	ANKRD31	Q8N7Z5	1873 aa		13.44	□□□□□ -0.26
MUC1-216	ENST00000467134	EP400	Q96L91	3159 aa		13.44	□□□□□ -0.26
MUC1-216	ENST00000467134	ZBTB22	O15209	634 aa		13.44	□□□□□ -0.26
MUC1-216	ENST00000467134	PHF14	O94880	888 aa		13.44	□□□□□ -0.26
MUC1-216	ENST00000467134	HCLS1	P14317	486 aa	Predicted RBP	13.44	□□□□□ -0.26
MUC1-216	ENST00000467134	BAG6	P46379	1132 aa		13.44	□□□□□ -0.26
MUC1-216	ENST00000467134	LDHAL6A	Q6ZMR3	332 aa		13.44	□□□□□ -0.26
MUC1-216	ENST00000467134	CNTROB	Q8N137	903 aa		13.44	□□□□□ -0.26
MUC1-216	ENST00000467134	VGLL2	Q8N8G2	317 aa		13.44	□□□□□ -0.26
MUC1-216	ENST00000467134	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.44	□□□□□ -0.26
MUC1-216	ENST00000467134	NLRP3	Q96P20	1036 aa		13.44	□□□□□ -0.26
MUC1-216	ENST00000467134	DBNL	Q9UJU6	430 aa	Known RBP	13.44	□□□□□ -0.26
MUC1-216	ENST00000467134	MYH7	P12883	1935 aa		13.44	□□□□□ -0.26
MUC1-216	ENST00000467134	GTF2E1	P29083	439 aa	Predicted RBP	13.43	□□□□□ -0.26
MUC1-216	ENST00000467134	IGHMBP2	P38935	993 aa	Known RBP	13.43	□□□□□ -0.26
MUC1-216	ENST00000467134	SF3B2	Q13435	895 aa	Known RBP	13.43	□□□□□ -0.26
MUC1-216	ENST00000467134	LRRC24	Q50LG9	513 aa		13.43	□□□□□ -0.26
MUC1-216	ENST00000467134	CNBD1	Q8NA66	436 aa		13.43	□□□□□ -0.26
MUC1-216	ENST00000467134	EVI5L	Q96CN4	794 aa		13.43	□□□□□ -0.26
MUC1-216	ENST00000467134	ZNF594	Q96JF6	807 aa	Predicted RBP	13.43	□□□□□ -0.26
MUC1-216	ENST00000467134	TFCP2L1	Q9NZI6	479 aa		13.43	□□□□□ -0.26
MUC1-216	ENST00000467134	AKAP11	Q9UKA4	1901 aa		13.43	□□□□□ -0.26
MUC1-216	ENST00000467134	HIP1	O00291	1037 aa		13.42	□□□□□ -0.26
MUC1-216	ENST00000467134	PDE8B	O95263	885 aa		13.42	□□□□□ -0.26
MUC1-216	ENST00000467134	TBC1D32	Q96NH3	1257 aa		13.42	□□□□□ -0.26
MUC1-216	ENST00000467134	PUS3	Q9BZE2	481 aa	Known RBP	13.42	□□□□□ -0.26
MUC1-216	ENST00000467134	CNNM1	Q9NRU3	951 aa		13.42	□□□□□ -0.26
MUC1-216	ENST00000467134	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.42	□□□□□ -0.26
MUC1-216	ENST00000467134	PNPLA7	Q6ZV29	1317 aa		13.41	□□□□□ -0.26
MUC1-216	ENST00000467134		A0A1B0GUL7	405 aa		13.41	□□□□□ -0.26
MUC1-216	ENST00000467134	KLRG2	A4D1S0	409 aa	Predicted RBP	13.41	□□□□□ -0.26
MUC1-216	ENST00000467134	ANP32A	P39687	249 aa	Known RBP	13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms