RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 RBM17Q96I25 401 aaKnown RBP17.34■□□□□ 0.37
UBR4-210ENST00000466969 SIN3AQ96ST3 1273 aa17.34■□□□□ 0.37
UBR4-210ENST00000466969 R3HDMLQ9H3Y0 253 aa17.34■□□□□ 0.37
UBR4-210ENST00000466969 PRAMEF22A3QJZ6 481 aa17.33■□□□□ 0.36
UBR4-210ENST00000466969 HOXA10P31260 410 aaPredicted RBP17.33■□□□□ 0.36
UBR4-210ENST00000466969 ZNF496Q96IT1 587 aaPredicted RBP17.33■□□□□ 0.36
UBR4-210ENST00000466969 LAMA3Q16787 3333 aa17.33■□□□□ 0.36
UBR4-210ENST00000466969 KIF7Q2M1P5 1343 aa17.32■□□□□ 0.36
UBR4-210ENST00000466969 A0A1W2PPC1 479 aa17.32■□□□□ 0.36
UBR4-210ENST00000466969 LRCH3Q96II8 777 aa17.32■□□□□ 0.36
UBR4-210ENST00000466969 STXBP5LQ9Y2K9 1186 aa17.32■□□□□ 0.36
UBR4-210ENST00000466969 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
UBR4-210ENST00000466969 SOX1O00570 391 aaPredicted RBP17.31■□□□□ 0.36
UBR4-210ENST00000466969 ALDH1A1P00352 501 aa17.31■□□□□ 0.36
UBR4-210ENST00000466969 EGFRP00533 1210 aa17.31■□□□□ 0.36
UBR4-210ENST00000466969 SLC51AQ86UW1 340 aa17.31■□□□□ 0.36
UBR4-210ENST00000466969 ERO1AQ96HE7 468 aa17.31■□□□□ 0.36
UBR4-210ENST00000466969 CRAMP1Q96RY5 1269 aa17.31■□□□□ 0.36
UBR4-210ENST00000466969 NYXQ9GZU5 481 aa17.31■□□□□ 0.36
UBR4-210ENST00000466969 PRO3102Q9H379 93 aa17.31■□□□□ 0.36
UBR4-210ENST00000466969 GGA3Q9NZ52 723 aa17.31■□□□□ 0.36
UBR4-210ENST00000466969 KIAA2012Q0VF49 1180 aa17.3■□□□□ 0.36
UBR4-210ENST00000466969 MKRN3Q13064 507 aaKnown RBP17.3■□□□□ 0.36
UBR4-210ENST00000466969 NBPF11Q86T75 865 aa17.3■□□□□ 0.36
UBR4-210ENST00000466969 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.3■□□□□ 0.36
UBR4-210ENST00000466969 ZNF333Q96JL9 665 aa17.3■□□□□ 0.36
UBR4-210ENST00000466969 VCANP13611 3396 aa17.29■□□□□ 0.36
UBR4-210ENST00000466969 DPP8Q6V1X1 898 aaPredicted RBP17.29■□□□□ 0.36
UBR4-210ENST00000466969 MPNDQ8N594 471 aa17.29■□□□□ 0.36
UBR4-210ENST00000466969 RTFDC1Q9BY42 306 aaPredicted RBP17.29■□□□□ 0.36
UBR4-210ENST00000466969 RGL2O15211 777 aa17.28■□□□□ 0.36
UBR4-210ENST00000466969 COL9A1P20849 921 aa17.28■□□□□ 0.36
UBR4-210ENST00000466969 ZNF790Q6PG37 636 aa17.28■□□□□ 0.36
UBR4-210ENST00000466969 NUTM1Q86Y26 1132 aa17.28■□□□□ 0.36
UBR4-210ENST00000466969 FMNL2Q96PY5 1086 aa17.28■□□□□ 0.36
UBR4-210ENST00000466969 EFCC1Q9HA90 598 aa17.28■□□□□ 0.36
UBR4-210ENST00000466969 ATP6V0A2Q9Y487 856 aa17.28■□□□□ 0.36
UBR4-210ENST00000466969 ABCC12Q96J65 1359 aa17.28■□□□□ 0.36
UBR4-210ENST00000466969 UBE2Q2LH0YL09 131 aa17.27■□□□□ 0.36
UBR4-210ENST00000466969 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.36
UBR4-210ENST00000466969 KIF4BQ2VIQ3 1234 aa17.27■□□□□ 0.36
UBR4-210ENST00000466969 CDCA8Q53HL2 280 aa17.27■□□□□ 0.36
UBR4-210ENST00000466969 DEFB123Q8N688 67 aa17.27■□□□□ 0.36
UBR4-210ENST00000466969 RIC1Q4ADV7 1423 aa17.27■□□□□ 0.35
UBR4-210ENST00000466969 YDJCA8MPS7 323 aa17.26■□□□□ 0.35
UBR4-210ENST00000466969 TTLL12Q14166 644 aaPredicted RBP17.26■□□□□ 0.35
UBR4-210ENST00000466969 SLC9C1Q4G0N8 1177 aa17.26■□□□□ 0.35
UBR4-210ENST00000466969 MOB2Q70IA6 237 aa17.26■□□□□ 0.35
UBR4-210ENST00000466969 CD99L2Q8TCZ2 262 aa17.26■□□□□ 0.35
UBR4-210ENST00000466969 PSMD14O00487 310 aa17.25■□□□□ 0.35
UBR4-210ENST00000466969 RPS12P25398 132 aaKnown RBP17.25■□□□□ 0.35
UBR4-210ENST00000466969 GPR153Q6NV75 609 aa17.25■□□□□ 0.35
UBR4-210ENST00000466969 NR2E3Q9Y5X4 410 aa17.25■□□□□ 0.35
UBR4-210ENST00000466969 TCIRG1Q13488 830 aa17.24■□□□□ 0.35
UBR4-210ENST00000466969 MYCP01106 439 aaPredicted RBP17.23■□□□□ 0.35
UBR4-210ENST00000466969 TEFQ10587 303 aa17.23■□□□□ 0.35
UBR4-210ENST00000466969 HTATIP2Q9BUP3 242 aa17.23■□□□□ 0.35
UBR4-210ENST00000466969 ZNF609O15014 1411 aa17.22■□□□□ 0.35
UBR4-210ENST00000466969 WTIPA6NIX2 430 aaPredicted RBP17.22■□□□□ 0.35
UBR4-210ENST00000466969 ANGEL2Q5VTE6 544 aaKnown RBP17.22■□□□□ 0.35
UBR4-210ENST00000466969 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.35
UBR4-210ENST00000466969 HLFQ16534 295 aa17.21■□□□□ 0.35
UBR4-210ENST00000466969 INHBEP58166 350 aa17.2■□□□□ 0.34
UBR4-210ENST00000466969 Q7L0L9 218 aa17.2■□□□□ 0.34
UBR4-210ENST00000466969 USP16Q9Y5T5 823 aa17.2■□□□□ 0.34
UBR4-210ENST00000466969 ERBB4Q15303 1308 aa17.2■□□□□ 0.34
UBR4-210ENST00000466969 IFNL1Q8IU54 200 aa17.19■□□□□ 0.34
UBR4-210ENST00000466969 SPTBN5Q9NRC6 3674 aaKnown RBP17.19■□□□□ 0.34
UBR4-210ENST00000466969 MANSC4A6NHS7 340 aaPredicted RBP17.18■□□□□ 0.34
UBR4-210ENST00000466969 PLA2G5P39877 138 aa17.18■□□□□ 0.34
UBR4-210ENST00000466969 SP3Q02447 781 aa17.18■□□□□ 0.34
UBR4-210ENST00000466969 SCARF1Q14162 830 aa17.18■□□□□ 0.34
UBR4-210ENST00000466969 ARHGEF6Q15052 776 aa17.18■□□□□ 0.34
UBR4-210ENST00000466969 MTHFSDQ2M296 383 aaKnown RBP17.18■□□□□ 0.34
UBR4-210ENST00000466969 SP8Q8IXZ3 490 aa17.18■□□□□ 0.34
UBR4-210ENST00000466969 ZBTB7BO15156 539 aaPredicted RBP17.17■□□□□ 0.34
UBR4-210ENST00000466969 NF2P35240 595 aa17.17■□□□□ 0.34
UBR4-210ENST00000466969 FAM122AQ96E09 287 aa17.17■□□□□ 0.34
UBR4-210ENST00000466969 NLRP3Q96P20 1036 aa17.17■□□□□ 0.34
UBR4-210ENST00000466969 MTMR10Q9NXD2 777 aa17.17■□□□□ 0.34
UBR4-210ENST00000466969 BBOX1O75936 387 aa17.16■□□□□ 0.34
UBR4-210ENST00000466969 DBNDD1Q9H9R9 158 aa17.16■□□□□ 0.34
UBR4-210ENST00000466969 PTCH2Q9Y6C5 1203 aa17.16■□□□□ 0.34
UBR4-210ENST00000466969 SPRYD7Q5W111 196 aa17.15■□□□□ 0.34
UBR4-210ENST00000466969 ABCC4O15439 1325 aa17.15■□□□□ 0.34
UBR4-210ENST00000466969 IL13P35225 146 aa17.14■□□□□ 0.33
UBR4-210ENST00000466969 WASHC4Q2M389 1173 aa17.14■□□□□ 0.33
UBR4-210ENST00000466969 OTUD7BQ6GQQ9 843 aa17.14■□□□□ 0.33
UBR4-210ENST00000466969 C3orf67Q6ZVT6 689 aa17.14■□□□□ 0.33
UBR4-210ENST00000466969 ARMC9Q7Z3E5 817 aa17.14■□□□□ 0.33
UBR4-210ENST00000466969 STAP2Q9UGK3 403 aa17.14■□□□□ 0.33
UBR4-210ENST00000466969 IBTKQ9P2D0 1353 aaPredicted RBP17.14■□□□□ 0.33
UBR4-210ENST00000466969 PTPN12Q05209 780 aaKnown RBP17.13■□□□□ 0.33
UBR4-210ENST00000466969 PRAMEF18Q5VWM3 479 aa17.13■□□□□ 0.33
UBR4-210ENST00000466969 HMOX1P09601 288 aa17.12■□□□□ 0.33
UBR4-210ENST00000466969 CRHR2Q13324 411 aa17.12■□□□□ 0.33
UBR4-210ENST00000466969 NKX2-3Q8TAU0 364 aa17.12■□□□□ 0.33
UBR4-210ENST00000466969 KDM3BQ7LBC6 1761 aa17.12■□□□□ 0.33
UBR4-210ENST00000466969 BTBD11A6QL63 1104 aa17.11■□□□□ 0.33
UBR4-210ENST00000466969 IGF2BP3O00425 579 aaKnown RBP eCLIP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms