RNA–Protein interactions for RNA: ENST00000466539.1

PSME4-204, Transcript of proteasome activator subunit 4, humanhuman

TSL 4

Gene PSME4, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-204ENST00000466539 PLEKHH1Q9ULM0 1364 aa8.55□□□□□ -1.04
PSME4-204ENST00000466539 CD163L1Q9NR16 1453 aa8.55□□□□□ -1.04
PSME4-204ENST00000466539 CDC42BPGQ6DT37 1551 aa8.55□□□□□ -1.04
PSME4-204ENST00000466539 FMN2Q9NZ56 1722 aa8.54□□□□□ -1.04
PSME4-204ENST00000466539 AKAP12Q02952 1782 aa8.54□□□□□ -1.04
PSME4-204ENST00000466539 NPC1L1Q9UHC9 1359 aa8.54□□□□□ -1.04
PSME4-204ENST00000466539 TMEM229AB2RXF0 380 aa8.54□□□□□ -1.04
PSME4-204ENST00000466539 SPINT1O43278 529 aa8.54□□□□□ -1.04
PSME4-204ENST00000466539 BMP2P12643 396 aa8.54□□□□□ -1.04
PSME4-204ENST00000466539 CTSOP43234 321 aaPredicted RBP8.54□□□□□ -1.04
PSME4-204ENST00000466539 TMF1P82094 1093 aa8.54□□□□□ -1.04
PSME4-204ENST00000466539 DIEXFQ68CQ4 756 aaKnown RBP8.54□□□□□ -1.04
PSME4-204ENST00000466539 NCOA3Q9Y6Q9 1424 aa8.54□□□□□ -1.04
PSME4-204ENST00000466539 ATP7BP35670 1465 aa8.53□□□□□ -1.04
PSME4-204ENST00000466539 NINLQ9Y2I6 1382 aa8.53□□□□□ -1.04
PSME4-204ENST00000466539 GNRH1P01148 92 aa8.53□□□□□ -1.04
PSME4-204ENST00000466539 RASA1P20936 1047 aa8.53□□□□□ -1.04
PSME4-204ENST00000466539 PTK7Q13308 1070 aa8.53□□□□□ -1.04
PSME4-204ENST00000466539 ZNF787Q6DD87 383 aa8.53□□□□□ -1.04
PSME4-204ENST00000466539 ZNF594Q96JF6 807 aaPredicted RBP8.53□□□□□ -1.04
PSME4-204ENST00000466539 TRAK1Q9UPV9 953 aa8.53□□□□□ -1.04
PSME4-204ENST00000466539 HRH3Q9Y5N1 445 aa8.53□□□□□ -1.04
PSME4-204ENST00000466539 MON2Q7Z3U7 1717 aa8.53□□□□□ -1.04
PSME4-204ENST00000466539 NRKQ7Z2Y5 1582 aa8.52□□□□□ -1.04
PSME4-204ENST00000466539 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.52□□□□□ -1.05
PSME4-204ENST00000466539 DNAAF2Q9NVR5 837 aaKnown RBP8.52□□□□□ -1.05
PSME4-204ENST00000466539 USP54Q70EL1 1684 aa8.52□□□□□ -1.05
PSME4-204ENST00000466539 ITSN1Q15811 1721 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 SOBPA7XYQ1 873 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 MEN1O00255 615 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 GDF10P55107 478 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 CLN3Q13286 438 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 FOXD4L5Q5VV16 416 aaPredicted RBP8.51□□□□□ -1.05
PSME4-204ENST00000466539 CCDC102BQ68D86 513 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 TRIM50Q86XT4 487 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 TPCN2Q8NHX9 752 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 CNKSR1Q969H4 720 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 XAGE2Q96GT9 111 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 PRAM1Q96QH2 718 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 ARXQ96QS3 562 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 SLC26A8Q96RN1 970 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 CPSF1Q10570 1443 aaKnown RBP8.51□□□□□ -1.05
PSME4-204ENST00000466539 ANKRD26Q9UPS8 1709 aa8.51□□□□□ -1.05
PSME4-204ENST00000466539 SOS2Q07890 1332 aaPredicted RBP8.51□□□□□ -1.05
PSME4-204ENST00000466539 KTN1Q86UP2 1357 aaKnown RBP8.5□□□□□ -1.05
PSME4-204ENST00000466539 USP17L15C9J2P7 530 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 USP17L10C9JJH3 530 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 USP17L13C9JLJ4 530 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 USP17L12C9JPN9 530 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 USP17L11C9JVI0 530 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 USP17L21D6R901 530 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 USP17L18D6R9N7 530 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 USP17L22D6RA61 530 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 USP17L17D6RBQ6 530 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 USP17L19D6RCP7 530 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 USP17L20D6RJB6 530 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 UPP2O95045 317 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 INHAP05111 366 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 SNRPBP14678 240 aaKnown RBP8.5□□□□□ -1.05
PSME4-204ENST00000466539 KCNA6P17658 529 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 PSME1Q06323 249 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 USP17L24Q0WX57 530 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 DDX10Q13206 875 aaKnown RBP8.5□□□□□ -1.05
PSME4-204ENST00000466539 SCARF1Q14162 830 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 LARGE2Q8N3Y3 721 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 PBXIP1Q96AQ6 731 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 ADGRL3Q9HAR2 1447 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 AMOTL2Q9Y2J4 779 aa8.5□□□□□ -1.05
PSME4-204ENST00000466539 ATAD2Q6PL18 1390 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 DCCP43146 1447 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 ANKARQ7Z5J8 1434 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 RGPD8O14715 1765 aaPredicted RBP8.49□□□□□ -1.05
PSME4-204ENST00000466539 FIGNL2A6NMB9 653 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 FAM196BA6NMK8 535 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 SFI1A8K8P3 1242 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 ATP1A2P50993 1020 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 LARP1Q6PKG0 1096 aaKnown RBP8.49□□□□□ -1.05
PSME4-204ENST00000466539 WAPLQ7Z5K2 1190 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 SIX5Q8N196 739 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 ESYT1Q9BSJ8 1104 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 POLMQ9NP87 494 aaPredicted RBP8.49□□□□□ -1.05
PSME4-204ENST00000466539 ZNF358Q9NW07 568 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 SERTAD1Q9UHV2 236 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 DNMT3LQ9UJW3 386 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 ZMIZ1Q9ULJ6 1067 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 EVC2Q86UK5 1308 aa8.49□□□□□ -1.05
PSME4-204ENST00000466539 ANKRD36BQ8N2N9 1353 aa8.48□□□□□ -1.05
PSME4-204ENST00000466539 PARD3Q8TEW0 1356 aa8.48□□□□□ -1.05
PSME4-204ENST00000466539 SSH2Q76I76 1423 aa8.48□□□□□ -1.05
PSME4-204ENST00000466539 WASLO00401 505 aaPredicted RBP8.48□□□□□ -1.05
PSME4-204ENST00000466539 RNF144AP50876 292 aaPredicted RBP8.48□□□□□ -1.05
PSME4-204ENST00000466539 CENPCQ03188 943 aa8.48□□□□□ -1.05
PSME4-204ENST00000466539 DPYDQ12882 1025 aa8.48□□□□□ -1.05
PSME4-204ENST00000466539 RNF217Q8TC41 542 aa8.48□□□□□ -1.05
PSME4-204ENST00000466539 TRIM47Q96LD4 638 aa8.48□□□□□ -1.05
PSME4-204ENST00000466539 FHDC1Q9C0D6 1143 aaPredicted RBP8.48□□□□□ -1.05
PSME4-204ENST00000466539 TTLL8A6PVC2 850 aa8.47□□□□□ -1.05
PSME4-204ENST00000466539 LGR5O75473 907 aa8.47□□□□□ -1.05
PSME4-204ENST00000466539 ANKMY2Q8IV38 441 aa8.47□□□□□ -1.05
PSME4-204ENST00000466539 SLC4A9Q96Q91 983 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms