RNA–Protein interactions for RNA: ENST00000466290.1

SKIV2L-205, Transcript of Ski2 like RNA helicase, humanhuman

TSL 3

Gene SKIV2L, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-205ENST00000466290 GRAPLQ8TC17 118 aaPredicted RBP12.75□□□□□ -0.37
SKIV2L-205ENST00000466290 BCL2L13Q9BXK5 485 aa12.75□□□□□ -0.37
SKIV2L-205ENST00000466290 LTBP3Q9NS15 1303 aa12.75□□□□□ -0.37
SKIV2L-205ENST00000466290 CHD4Q14839 1912 aa12.74□□□□□ -0.37
SKIV2L-205ENST00000466290 COL11A2P13942 1736 aaPredicted RBP12.74□□□□□ -0.37
SKIV2L-205ENST00000466290 GRM8O00222 908 aa12.74□□□□□ -0.37
SKIV2L-205ENST00000466290 YY1P25490 414 aa12.74□□□□□ -0.37
SKIV2L-205ENST00000466290 CCT4P50991 539 aaKnown RBP12.74□□□□□ -0.37
SKIV2L-205ENST00000466290 RTL5Q5HYW3 569 aaPredicted RBP12.74□□□□□ -0.37
SKIV2L-205ENST00000466290 C3orf67Q6ZVT6 689 aa12.74□□□□□ -0.37
SKIV2L-205ENST00000466290 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
SKIV2L-205ENST00000466290 C9orf78Q9NZ63 289 aaPredicted RBP12.74□□□□□ -0.37
SKIV2L-205ENST00000466290 NOB1Q9ULX3 412 aaKnown RBP12.74□□□□□ -0.37
SKIV2L-205ENST00000466290 HDAC5Q9UQL6 1122 aa12.74□□□□□ -0.37
SKIV2L-205ENST00000466290 ABCC4O15439 1325 aa12.73□□□□□ -0.37
SKIV2L-205ENST00000466290 ZC3H4Q9UPT8 1303 aaKnown RBP12.73□□□□□ -0.37
SKIV2L-205ENST00000466290 NEFLP07196 543 aa12.73□□□□□ -0.37
SKIV2L-205ENST00000466290 LMNB1P20700 586 aa12.73□□□□□ -0.37
SKIV2L-205ENST00000466290 CTSWP56202 376 aa12.73□□□□□ -0.37
SKIV2L-205ENST00000466290 TAOK3Q9H2K8 898 aa12.73□□□□□ -0.37
SKIV2L-205ENST00000466290 ATP6V0A2Q9Y487 856 aa12.73□□□□□ -0.37
SKIV2L-205ENST00000466290 TNRC6CQ9HCJ0 1690 aaKnown RBP12.73□□□□□ -0.37
SKIV2L-205ENST00000466290 RTL9Q8NET4 1388 aa12.72□□□□□ -0.37
SKIV2L-205ENST00000466290 UTYO14607 1347 aa12.72□□□□□ -0.37
SKIV2L-205ENST00000466290 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
SKIV2L-205ENST00000466290 CASP7P55210 303 aa12.72□□□□□ -0.37
SKIV2L-205ENST00000466290 SP8Q8IXZ3 490 aa12.72□□□□□ -0.37
SKIV2L-205ENST00000466290 CDC5LQ99459 802 aaKnown RBP12.72□□□□□ -0.37
SKIV2L-205ENST00000466290 PSMD1Q99460 953 aa12.72□□□□□ -0.37
SKIV2L-205ENST00000466290 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
SKIV2L-205ENST00000466290 NFKBIEO00221 500 aa12.71□□□□□ -0.37
SKIV2L-205ENST00000466290 CSF1RP07333 972 aa12.71□□□□□ -0.37
SKIV2L-205ENST00000466290 RPS8P62241 208 aaKnown RBP12.71□□□□□ -0.37
SKIV2L-205ENST00000466290 FKBP4Q02790 459 aaKnown RBP eCLIP12.71□□□□□ -0.37
SKIV2L-205ENST00000466290 ATF7IPQ6VMQ6 1270 aa12.71□□□□□ -0.37
SKIV2L-205ENST00000466290 TTLL11Q8NHH1 800 aa12.71□□□□□ -0.37
SKIV2L-205ENST00000466290 VPS33BQ9H267 617 aa12.71□□□□□ -0.37
SKIV2L-205ENST00000466290 LAMB2P55268 1798 aa12.71□□□□□ -0.38
SKIV2L-205ENST00000466290 DDX60Q8IY21 1712 aaKnown RBP12.71□□□□□ -0.38
SKIV2L-205ENST00000466290 C9orf131Q5VYM1 1079 aa12.7□□□□□ -0.38
SKIV2L-205ENST00000466290 ZKSCAN2Q63HK3 967 aa12.7□□□□□ -0.38
SKIV2L-205ENST00000466290 SUPT20HQ8NEM7 779 aa12.7□□□□□ -0.38
SKIV2L-205ENST00000466290 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
SKIV2L-205ENST00000466290 BCAR3O75815 825 aa12.69□□□□□ -0.38
SKIV2L-205ENST00000466290 MS4A1P11836 297 aa12.69□□□□□ -0.38
SKIV2L-205ENST00000466290 INTS3Q68E01 1043 aaKnown RBP12.69□□□□□ -0.38
SKIV2L-205ENST00000466290 ANKRD18AQ8IVF6 992 aa12.69□□□□□ -0.38
SKIV2L-205ENST00000466290 JARID2Q92833 1246 aaPredicted RBP12.69□□□□□ -0.38
SKIV2L-205ENST00000466290 RNF181Q9P0P0 153 aa12.69□□□□□ -0.38
SKIV2L-205ENST00000466290 TRIM27P14373 513 aa12.68□□□□□ -0.38
SKIV2L-205ENST00000466290 MPNDQ8N594 471 aa12.68□□□□□ -0.38
SKIV2L-205ENST00000466290 FRAT1Q92837 279 aaPredicted RBP12.68□□□□□ -0.38
SKIV2L-205ENST00000466290 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
SKIV2L-205ENST00000466290 RTFDC1Q9BY42 306 aaPredicted RBP12.68□□□□□ -0.38
SKIV2L-205ENST00000466290 USP44Q9H0E7 712 aa12.68□□□□□ -0.38
SKIV2L-205ENST00000466290 FER1L6Q2WGJ9 1857 aa12.68□□□□□ -0.38
SKIV2L-205ENST00000466290 ANKRD18BA2A2Z9 1011 aa12.67□□□□□ -0.38
SKIV2L-205ENST00000466290 IGHMBP2P38935 993 aaKnown RBP12.67□□□□□ -0.38
SKIV2L-205ENST00000466290 FOXO4P98177 505 aa12.67□□□□□ -0.38
SKIV2L-205ENST00000466290 RASSF7Q02833 373 aa12.67□□□□□ -0.38
SKIV2L-205ENST00000466290 IFIT5Q13325 482 aaKnown RBP12.67□□□□□ -0.38
SKIV2L-205ENST00000466290 DPP8Q6V1X1 898 aaPredicted RBP12.67□□□□□ -0.38
SKIV2L-205ENST00000466290 GREM2Q9H772 168 aa12.67□□□□□ -0.38
SKIV2L-205ENST00000466290 SEC31BQ9NQW1 1179 aa12.67□□□□□ -0.38
SKIV2L-205ENST00000466290 BSDC1Q9NW68 430 aaPredicted RBP12.67□□□□□ -0.38
SKIV2L-205ENST00000466290 SNED1Q8TER0 1413 aa12.67□□□□□ -0.38
SKIV2L-205ENST00000466290 MYCNP04198 464 aaPredicted RBP12.66□□□□□ -0.38
SKIV2L-205ENST00000466290 GNAI3P08754 354 aa12.66□□□□□ -0.38
SKIV2L-205ENST00000466290 NBPF7P0C2Y1 421 aaPredicted RBP12.66□□□□□ -0.38
SKIV2L-205ENST00000466290 ITGA6P23229 1130 aa12.66□□□□□ -0.38
SKIV2L-205ENST00000466290 CCDC57Q2TAC2 916 aa12.66□□□□□ -0.38
SKIV2L-205ENST00000466290 LMBR1LQ6UX01 489 aa12.66□□□□□ -0.38
SKIV2L-205ENST00000466290 JDP2Q8WYK2 163 aa12.66□□□□□ -0.38
SKIV2L-205ENST00000466290 PODXL2Q9NZ53 605 aa12.66□□□□□ -0.38
SKIV2L-205ENST00000466290 RCAN3Q9UKA8 241 aa12.66□□□□□ -0.38
SKIV2L-205ENST00000466290 MYH3P11055 1940 aa12.66□□□□□ -0.38
SKIV2L-205ENST00000466290 UBTFL1P0CB47 393 aaPredicted RBP12.65□□□□□ -0.38
SKIV2L-205ENST00000466290 IARSP41252 1262 aaKnown RBP12.65□□□□□ -0.38
SKIV2L-205ENST00000466290 RABL6Q3YEC7 729 aaPredicted RBP12.65□□□□□ -0.38
SKIV2L-205ENST00000466290 DPY19L2Q6NUT2 758 aa12.65□□□□□ -0.38
SKIV2L-205ENST00000466290 OLFM4Q6UX06 510 aa12.65□□□□□ -0.38
SKIV2L-205ENST00000466290 FTSJ3Q8IY81 847 aaKnown RBP12.65□□□□□ -0.38
SKIV2L-205ENST00000466290 DZIP1LQ8IYY4 767 aaKnown RBP12.65□□□□□ -0.38
SKIV2L-205ENST00000466290 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.65□□□□□ -0.38
SKIV2L-205ENST00000466290 SUCLG2Q96I99 432 aa12.65□□□□□ -0.38
SKIV2L-205ENST00000466290 MPHOSPH8Q99549 860 aa12.65□□□□□ -0.38
SKIV2L-205ENST00000466290 CACNA1SQ13698 1873 aa12.65□□□□□ -0.38
SKIV2L-205ENST00000466290 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
SKIV2L-205ENST00000466290 SBF1O95248 1867 aa12.64□□□□□ -0.39
SKIV2L-205ENST00000466290 FAM161AQ3B820 660 aa12.64□□□□□ -0.39
SKIV2L-205ENST00000466290 ZNF784Q8NCA9 323 aaPredicted RBP12.64□□□□□ -0.39
SKIV2L-205ENST00000466290 CCDC85AQ96PX6 553 aaPredicted RBP12.64□□□□□ -0.39
SKIV2L-205ENST00000466290 EYA3Q99504 573 aa12.64□□□□□ -0.39
SKIV2L-205ENST00000466290 ANKRD2Q9GZV1 360 aa12.64□□□□□ -0.39
SKIV2L-205ENST00000466290 ZNF277Q9NRM2 450 aaPredicted RBP12.64□□□□□ -0.39
SKIV2L-205ENST00000466290 NSFL1CQ9UNZ2 370 aaKnown RBP12.64□□□□□ -0.39
SKIV2L-205ENST00000466290 CHMP3Q9Y3E7 222 aa12.64□□□□□ -0.39
SKIV2L-205ENST00000466290 XDHP47989 1333 aa12.63□□□□□ -0.39
SKIV2L-205ENST00000466290 PRELPP51888 382 aa12.63□□□□□ -0.39
SKIV2L-205ENST00000466290 TAF7LQ5H9L4 462 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms