RNA–Protein interactions for RNA: ENST00000466124.1

PRKCB-204, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-204ENST00000466124 TPTE2Q6XPS3 522 aa7.44□□□□□ -1.22
PRKCB-204ENST00000466124 FMNL2Q96PY5 1086 aa7.44□□□□□ -1.22
PRKCB-204ENST00000466124 ADARB2Q9NS39 739 aaKnown RBP7.44□□□□□ -1.22
PRKCB-204ENST00000466124 ZNF652Q9Y2D9 606 aa7.44□□□□□ -1.22
PRKCB-204ENST00000466124 SOX10P56693 466 aa7.43□□□□□ -1.22
PRKCB-204ENST00000466124 TEFQ10587 303 aa7.43□□□□□ -1.22
PRKCB-204ENST00000466124 IL17REQ8NFR9 667 aa7.43□□□□□ -1.22
PRKCB-204ENST00000466124 SAGE1Q9NXZ1 904 aa7.43□□□□□ -1.22
PRKCB-204ENST00000466124 GPRC5DQ9NZD1 345 aa7.43□□□□□ -1.22
PRKCB-204ENST00000466124 PGAP2Q9UHJ9 254 aa7.43□□□□□ -1.22
PRKCB-204ENST00000466124 CEMIPQ8WUJ3 1361 aa7.43□□□□□ -1.22
PRKCB-204ENST00000466124 RIC1Q4ADV7 1423 aa7.43□□□□□ -1.22
PRKCB-204ENST00000466124 HOXA10P31260 410 aaPredicted RBP7.42□□□□□ -1.22
PRKCB-204ENST00000466124 LARGE2Q8N3Y3 721 aa7.42□□□□□ -1.22
PRKCB-204ENST00000466124 SP7Q8TDD2 431 aaPredicted RBP7.42□□□□□ -1.22
PRKCB-204ENST00000466124 ZC3H15Q8WU90 426 aaKnown RBP7.42□□□□□ -1.22
PRKCB-204ENST00000466124 ZIC5Q96T25 663 aa7.42□□□□□ -1.22
PRKCB-204ENST00000466124 POLR3GLQ9BT43 218 aa7.42□□□□□ -1.22
PRKCB-204ENST00000466124 GLIS2Q9BZE0 524 aaPredicted RBP7.42□□□□□ -1.22
PRKCB-204ENST00000466124 NIP7Q9Y221 180 aaKnown RBP eCLIP7.42□□□□□ -1.22
PRKCB-204ENST00000466124 KIF7Q2M1P5 1343 aa7.42□□□□□ -1.22
PRKCB-204ENST00000466124 CDHR2Q9BYE9 1310 aa7.42□□□□□ -1.22
PRKCB-204ENST00000466124 ABCC12Q96J65 1359 aa7.42□□□□□ -1.22
PRKCB-204ENST00000466124 GNAT3A8MTJ3 354 aa7.41□□□□□ -1.22
PRKCB-204ENST00000466124 KCNQ3O43525 872 aa7.41□□□□□ -1.22
PRKCB-204ENST00000466124 PIP4K2AP48426 406 aaPredicted RBP7.41□□□□□ -1.22
PRKCB-204ENST00000466124 NIM1KQ8IY84 436 aa7.41□□□□□ -1.22
PRKCB-204ENST00000466124 GAS2L2Q8NHY3 880 aa7.41□□□□□ -1.22
PRKCB-204ENST00000466124 DCBLD2Q96PD2 775 aa7.41□□□□□ -1.22
PRKCB-204ENST00000466124 USP16Q9Y5T5 823 aa7.41□□□□□ -1.22
PRKCB-204ENST00000466124 IBTKQ9P2D0 1353 aaPredicted RBP7.41□□□□□ -1.22
PRKCB-204ENST00000466124 NPC1L1Q9UHC9 1359 aa7.41□□□□□ -1.22
PRKCB-204ENST00000466124 FAM155AB1AL88 458 aaPredicted RBP7.4□□□□□ -1.22
PRKCB-204ENST00000466124 NBPF26B4DH59 902 aa7.4□□□□□ -1.22
PRKCB-204ENST00000466124 NBPF10Q6P3W6 841 aaKnown RBP7.4□□□□□ -1.22
PRKCB-204ENST00000466124 CDC37L1Q7L3B6 337 aa7.4□□□□□ -1.22
PRKCB-204ENST00000466124 NBPF15Q8N660 670 aa7.4□□□□□ -1.22
PRKCB-204ENST00000466124 NYXQ9GZU5 481 aa7.4□□□□□ -1.22
PRKCB-204ENST00000466124 VPS33BQ9H267 617 aa7.4□□□□□ -1.22
PRKCB-204ENST00000466124 COL3A1P02461 1466 aaPredicted RBP7.4□□□□□ -1.22
PRKCB-204ENST00000466124 PRAMEF22A3QJZ6 481 aa7.39□□□□□ -1.23
PRKCB-204ENST00000466124 FAM177BA6PVY3 158 aa7.39□□□□□ -1.23
PRKCB-204ENST00000466124 BTBD11A6QL63 1104 aa7.39□□□□□ -1.23
PRKCB-204ENST00000466124 PPEF1O14829 653 aaPredicted RBP7.39□□□□□ -1.23
PRKCB-204ENST00000466124 PPIP5K2O43314 1243 aa7.39□□□□□ -1.23
PRKCB-204ENST00000466124 DIAPH1O60610 1272 aaKnown RBP7.39□□□□□ -1.23
PRKCB-204ENST00000466124 SNRPA1P09661 255 aaKnown RBP7.39□□□□□ -1.23
PRKCB-204ENST00000466124 GMPSP49915 693 aaPredicted RBP7.39□□□□□ -1.23
PRKCB-204ENST00000466124 HIRAP54198 1017 aaPredicted RBP7.39□□□□□ -1.23
PRKCB-204ENST00000466124 HUNKP57058 714 aa7.39□□□□□ -1.23
PRKCB-204ENST00000466124 IRX5P78411 483 aaPredicted RBP7.39□□□□□ -1.23
PRKCB-204ENST00000466124 CXCL9Q07325 125 aa7.39□□□□□ -1.23
PRKCB-204ENST00000466124 HLFQ16534 295 aa7.39□□□□□ -1.23
PRKCB-204ENST00000466124 CTU1Q7Z7A3 348 aaKnown RBP7.39□□□□□ -1.23
PRKCB-204ENST00000466124 SLC51AQ86UW1 340 aa7.39□□□□□ -1.23
PRKCB-204ENST00000466124 PDCD7Q8N8D1 485 aaKnown RBP7.39□□□□□ -1.23
PRKCB-204ENST00000466124 GCC1Q96CN9 775 aa7.39□□□□□ -1.23
PRKCB-204ENST00000466124 CRAMP1Q96RY5 1269 aa7.39□□□□□ -1.23
PRKCB-204ENST00000466124 ZNF408Q9H9D4 720 aa7.39□□□□□ -1.23
PRKCB-204ENST00000466124 KNSTRNQ9Y448 316 aa7.39□□□□□ -1.23
PRKCB-204ENST00000466124 GTF2E1P29083 439 aaPredicted RBP7.38□□□□□ -1.23
PRKCB-204ENST00000466124 AOC3Q16853 763 aa7.38□□□□□ -1.23
PRKCB-204ENST00000466124 RGMBQ6NW40 437 aa7.38□□□□□ -1.23
PRKCB-204ENST00000466124 NUTM1Q86Y26 1132 aa7.38□□□□□ -1.23
PRKCB-204ENST00000466124 TRPM4Q8TD43 1214 aa7.38□□□□□ -1.23
PRKCB-204ENST00000466124 RPGRQ92834 1020 aaKnown RBP7.38□□□□□ -1.23
PRKCB-204ENST00000466124 RTFDC1Q9BY42 306 aaPredicted RBP7.38□□□□□ -1.23
PRKCB-204ENST00000466124 RNF186Q9NXI6 227 aa7.38□□□□□ -1.23
PRKCB-204ENST00000466124 ZNRF3Q9ULT6 936 aa7.38□□□□□ -1.23
PRKCB-204ENST00000466124 TIMELESSQ9UNS1 1208 aa7.38□□□□□ -1.23
PRKCB-204ENST00000466124 AKAP11Q9UKA4 1901 aa7.37□□□□□ -1.23
PRKCB-204ENST00000466124 ERVV-1B6SEH8 477 aa7.37□□□□□ -1.23
PRKCB-204ENST00000466124 KIF23Q02241 960 aaPredicted RBP7.37□□□□□ -1.23
PRKCB-204ENST00000466124 CCDC102AQ96A19 550 aa7.37□□□□□ -1.23
PRKCB-204ENST00000466124 RBM17Q96I25 401 aaKnown RBP7.37□□□□□ -1.23
PRKCB-204ENST00000466124 GBA2Q9HCG7 927 aaPredicted RBP7.37□□□□□ -1.23
PRKCB-204ENST00000466124 HPS5Q9UPZ3 1129 aa7.37□□□□□ -1.23
PRKCB-204ENST00000466124 ATP6V0A2Q9Y487 856 aa7.37□□□□□ -1.23
PRKCB-204ENST00000466124 MKI67P46013 3256 aaKnown RBP7.37□□□□□ -1.23
PRKCB-204ENST00000466124 NUP98P52948 1817 aa7.36□□□□□ -1.23
PRKCB-204ENST00000466124 LAMB4A4D0S4 1761 aa7.36□□□□□ -1.23
PRKCB-204ENST00000466124 UBN2Q6ZU65 1347 aa7.36□□□□□ -1.23
PRKCB-204ENST00000466124 TRPA1O75762 1119 aa7.36□□□□□ -1.23
PRKCB-204ENST00000466124 SLC10A3P09131 477 aa7.36□□□□□ -1.23
PRKCB-204ENST00000466124 HSPA5P11021 654 aaKnown RBP7.36□□□□□ -1.23
PRKCB-204ENST00000466124 KIAA2012Q0VF49 1180 aa7.36□□□□□ -1.23
PRKCB-204ENST00000466124 TNIP1Q15025 636 aa7.36□□□□□ -1.23
PRKCB-204ENST00000466124 PKN2Q16513 984 aaKnown RBP7.36□□□□□ -1.23
PRKCB-204ENST00000466124 IER5LQ5T953 404 aa7.36□□□□□ -1.23
PRKCB-204ENST00000466124 USP48Q86UV5 1035 aa7.36□□□□□ -1.23
PRKCB-204ENST00000466124 SUPT20HQ8NEM7 779 aa7.36□□□□□ -1.23
PRKCB-204ENST00000466124 COLQQ9Y215 455 aaPredicted RBP7.36□□□□□ -1.23
PRKCB-204ENST00000466124 MAP3K15Q6ZN16 1313 aa7.35□□□□□ -1.23
PRKCB-204ENST00000466124 SHTN1A0MZ66 631 aa7.35□□□□□ -1.23
PRKCB-204ENST00000466124 RAD17O75943 681 aa7.35□□□□□ -1.23
PRKCB-204ENST00000466124 NTSR2O95665 410 aa7.35□□□□□ -1.23
PRKCB-204ENST00000466124 ZNF157P51786 506 aaPredicted RBP7.35□□□□□ -1.23
PRKCB-204ENST00000466124 EIF4G2P78344 907 aaKnown RBP eCLIP7.35□□□□□ -1.23
PRKCB-204ENST00000466124 HABP4Q5JVS0 413 aaKnown RBP7.35□□□□□ -1.23
PRKCB-204ENST00000466124 SUSD4Q5VX71 490 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms