RNA–Protein interactions for RNA: ENST00000463596.5

APTX-211, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 1,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-211ENST00000463596 CCDC152Q4G0S7 254 aa17.8■□□□□ 0.44
APTX-211ENST00000463596 UBE3BQ7Z3V4 1068 aa17.8■□□□□ 0.44
APTX-211ENST00000463596 DICER1Q9UPY3 1922 aaKnown RBP17.79■□□□□ 0.44
APTX-211ENST00000463596 GOLGB1Q14789 3259 aaKnown RBP17.79■□□□□ 0.44
APTX-211ENST00000463596 GRAPQ13588 217 aa17.79■□□□□ 0.44
APTX-211ENST00000463596 ATF7IPQ6VMQ6 1270 aa17.79■□□□□ 0.44
APTX-211ENST00000463596 C3orf67Q6ZVT6 689 aa17.79■□□□□ 0.44
APTX-211ENST00000463596 GRAPLQ8TC17 118 aaPredicted RBP17.79■□□□□ 0.44
APTX-211ENST00000463596 C9orf78Q9NZ63 289 aaPredicted RBP17.79■□□□□ 0.44
APTX-211ENST00000463596 HDAC5Q9UQL6 1122 aa17.79■□□□□ 0.44
APTX-211ENST00000463596 CCDC88AQ3V6T2 1871 aa17.79■□□□□ 0.44
APTX-211ENST00000463596 CTSWP56202 376 aa17.78■□□□□ 0.44
APTX-211ENST00000463596 CCDC93Q567U6 631 aa17.78■□□□□ 0.44
APTX-211ENST00000463596 ZKSCAN2Q63HK3 967 aa17.78■□□□□ 0.44
APTX-211ENST00000463596 RTKN2Q8IZC4 609 aa17.78■□□□□ 0.44
APTX-211ENST00000463596 TMX4Q9H1E5 349 aaPredicted RBP17.78■□□□□ 0.44
APTX-211ENST00000463596 ABCC4O15439 1325 aa17.78■□□□□ 0.44
APTX-211ENST00000463596 LRRC37AA6NMS7 1700 aa17.77■□□□□ 0.44
APTX-211ENST00000463596 BCAR3O75815 825 aa17.77■□□□□ 0.44
APTX-211ENST00000463596 RTL5Q5HYW3 569 aaPredicted RBP17.77■□□□□ 0.44
APTX-211ENST00000463596 INTS3Q68E01 1043 aaKnown RBP17.77■□□□□ 0.44
APTX-211ENST00000463596 ARHGAP27Q6ZUM4 889 aa17.77■□□□□ 0.44
APTX-211ENST00000463596 TAF1P21675 1872 aa17.77■□□□□ 0.43
APTX-211ENST00000463596 C21orf2O43822 256 aa17.76■□□□□ 0.43
APTX-211ENST00000463596 CSF1RP07333 972 aa17.76■□□□□ 0.43
APTX-211ENST00000463596 MS4A1P11836 297 aa17.76■□□□□ 0.43
APTX-211ENST00000463596 TTLL11Q8NHH1 800 aa17.76■□□□□ 0.43
APTX-211ENST00000463596 ATP6V0A2Q9Y487 856 aa17.76■□□□□ 0.43
APTX-211ENST00000463596 PPEF1O14829 653 aaPredicted RBP17.75■□□□□ 0.43
APTX-211ENST00000463596 SP8Q8IXZ3 490 aa17.75■□□□□ 0.43
APTX-211ENST00000463596 CDC5LQ99459 802 aaKnown RBP17.75■□□□□ 0.43
APTX-211ENST00000463596 WWC3Q9ULE0 1092 aa17.75■□□□□ 0.43
APTX-211ENST00000463596 ZC3H4Q9UPT8 1303 aaKnown RBP17.75■□□□□ 0.43
APTX-211ENST00000463596 SNED1Q8TER0 1413 aa17.74■□□□□ 0.43
APTX-211ENST00000463596 TRIM27P14373 513 aa17.74■□□□□ 0.43
APTX-211ENST00000463596 RPS8P62241 208 aaKnown RBP17.74■□□□□ 0.43
APTX-211ENST00000463596 PSMD1Q99460 953 aa17.74■□□□□ 0.43
APTX-211ENST00000463596 RCAN3Q9UKA8 241 aa17.74■□□□□ 0.43
APTX-211ENST00000463596 USP44Q9H0E7 712 aa17.73■□□□□ 0.43
APTX-211ENST00000463596 VPS33BQ9H267 617 aa17.73■□□□□ 0.43
APTX-211ENST00000463596 TAOK3Q9H2K8 898 aa17.73■□□□□ 0.43
APTX-211ENST00000463596 NFKBIEO00221 500 aa17.72■□□□□ 0.43
APTX-211ENST00000463596 LMNB1P20700 586 aa17.72■□□□□ 0.43
APTX-211ENST00000463596 FKBP4Q02790 459 aaKnown RBP eCLIP17.72■□□□□ 0.43
APTX-211ENST00000463596 JARID2Q92833 1246 aaPredicted RBP17.72■□□□□ 0.43
APTX-211ENST00000463596 FRAT1Q92837 279 aaPredicted RBP17.72■□□□□ 0.43
APTX-211ENST00000463596 UTRNP46939 3433 aa17.72■□□□□ 0.43
APTX-211ENST00000463596 FOXO4P98177 505 aa17.72■□□□□ 0.43
APTX-211ENST00000463596 ANKRD18AQ8IVF6 992 aa17.72■□□□□ 0.43
APTX-211ENST00000463596 SUPT20HQ8NEM7 779 aa17.72■□□□□ 0.43
APTX-211ENST00000463596 CNKSR2Q8WXI2 1034 aa17.72■□□□□ 0.43
APTX-211ENST00000463596 GNAI3P08754 354 aa17.71■□□□□ 0.42
APTX-211ENST00000463596 NBPF7P0C2Y1 421 aaPredicted RBP17.71■□□□□ 0.42
APTX-211ENST00000463596 RABL6Q3YEC7 729 aaPredicted RBP17.71■□□□□ 0.42
APTX-211ENST00000463596 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.71■□□□□ 0.42
APTX-211ENST00000463596 CELF1Q92879 486 aaKnown RBP17.71■□□□□ 0.42
APTX-211ENST00000463596 FTSJ3Q8IY81 847 aaKnown RBP17.7■□□□□ 0.42
APTX-211ENST00000463596 DZIP1LQ8IYY4 767 aaKnown RBP17.7■□□□□ 0.42
APTX-211ENST00000463596 RTFDC1Q9BY42 306 aaPredicted RBP17.7■□□□□ 0.42
APTX-211ENST00000463596 GREM2Q9H772 168 aa17.7■□□□□ 0.42
APTX-211ENST00000463596 BSDC1Q9NW68 430 aaPredicted RBP17.7■□□□□ 0.42
APTX-211ENST00000463596 LTBP1Q14766 1721 aa17.69■□□□□ 0.42
APTX-211ENST00000463596 ANKRD18BA2A2Z9 1011 aa17.69■□□□□ 0.42
APTX-211ENST00000463596 UBTFL1P0CB47 393 aaPredicted RBP17.69■□□□□ 0.42
APTX-211ENST00000463596 ITGA6P23229 1130 aa17.69■□□□□ 0.42
APTX-211ENST00000463596 YY1P25490 414 aa17.69■□□□□ 0.42
APTX-211ENST00000463596 IFIT5Q13325 482 aaKnown RBP17.69■□□□□ 0.42
APTX-211ENST00000463596 SEC31BQ9NQW1 1179 aa17.69■□□□□ 0.42
APTX-211ENST00000463596 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
APTX-211ENST00000463596 SPEF2Q9C093 1822 aa17.68■□□□□ 0.42
APTX-211ENST00000463596 IGHMBP2P38935 993 aaKnown RBP17.68■□□□□ 0.42
APTX-211ENST00000463596 C9orf131Q5VYM1 1079 aa17.68■□□□□ 0.42
APTX-211ENST00000463596 LMBR1LQ6UX01 489 aa17.68■□□□□ 0.42
APTX-211ENST00000463596 MPNDQ8N594 471 aa17.68■□□□□ 0.42
APTX-211ENST00000463596 KAZALD1Q96I82 304 aa17.68■□□□□ 0.42
APTX-211ENST00000463596 SUCLG2Q96I99 432 aa17.68■□□□□ 0.42
APTX-211ENST00000463596 YTHDC1Q96MU7 727 aaKnown RBP17.68■□□□□ 0.42
APTX-211ENST00000463596 PODXL2Q9NZ53 605 aa17.68■□□□□ 0.42
APTX-211ENST00000463596 CCDC57Q2TAC2 916 aa17.67■□□□□ 0.42
APTX-211ENST00000463596 FAM161AQ3B820 660 aa17.67■□□□□ 0.42
APTX-211ENST00000463596 TIAM2Q8IVF5 1701 aa17.67■□□□□ 0.42
APTX-211ENST00000463596 RNF39Q9H2S5 420 aa17.67■□□□□ 0.42
APTX-211ENST00000463596 RASSF7Q02833 373 aa17.66■□□□□ 0.42
APTX-211ENST00000463596 EPHA10Q5JZY3 1008 aa17.66■□□□□ 0.42
APTX-211ENST00000463596 DPP8Q6V1X1 898 aaPredicted RBP17.66■□□□□ 0.42
APTX-211ENST00000463596 CHMP4BQ9H444 224 aaKnown RBP17.66■□□□□ 0.42
APTX-211ENST00000463596 BICC1Q9H694 974 aaKnown RBP17.66■□□□□ 0.42
APTX-211ENST00000463596 RNF181Q9P0P0 153 aa17.66■□□□□ 0.42
APTX-211ENST00000463596 COL4A1P02462 1669 aa17.65■□□□□ 0.42
APTX-211ENST00000463596 IARSP41252 1262 aaKnown RBP17.65■□□□□ 0.42
APTX-211ENST00000463596 PDE3AQ14432 1141 aa17.65■□□□□ 0.42
APTX-211ENST00000463596 TMEM57Q8N5G2 664 aa17.65■□□□□ 0.42
APTX-211ENST00000463596 CLUAP1Q96AJ1 413 aa17.65■□□□□ 0.42
APTX-211ENST00000463596 MPHOSPH8Q99549 860 aa17.65■□□□□ 0.42
APTX-211ENST00000463596 XDHP47989 1333 aa17.64■□□□□ 0.41
APTX-211ENST00000463596 OLFM4Q6UX06 510 aa17.64■□□□□ 0.41
APTX-211ENST00000463596 ANKRD44Q8N8A2 993 aa17.64■□□□□ 0.41
APTX-211ENST00000463596 CCDC85AQ96PX6 553 aaPredicted RBP17.64■□□□□ 0.41
APTX-211ENST00000463596 ANKRD2Q9GZV1 360 aa17.64■□□□□ 0.41
APTX-211ENST00000463596 FBXO3Q9UK99 471 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms