RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 DDX46Q7L014 1031 aaKnown RBP22.48■■□□□ 1.19
VPS52-214ENST00000463486 ZNF784Q8NCA9 323 aaPredicted RBP22.48■■□□□ 1.19
VPS52-214ENST00000463486 GRAPLQ8TC17 118 aaPredicted RBP22.48■■□□□ 1.19
VPS52-214ENST00000463486 CELF1Q92879 486 aaKnown RBP22.48■■□□□ 1.19
VPS52-214ENST00000463486 PLA2G12BQ9BX93 195 aa22.48■■□□□ 1.19
VPS52-214ENST00000463486 NOB1Q9ULX3 412 aaKnown RBP22.48■■□□□ 1.19
VPS52-214ENST00000463486 HSP90B1P14625 803 aaKnown RBP22.47■■□□□ 1.19
VPS52-214ENST00000463486 LMNB1P20700 586 aa22.47■■□□□ 1.19
VPS52-214ENST00000463486 CC2D2BQ6DHV5 1058 aa22.47■■□□□ 1.19
VPS52-214ENST00000463486 SLC4A10Q6U841 1118 aa22.47■■□□□ 1.19
VPS52-214ENST00000463486 TTLL11Q8NHH1 800 aa22.47■■□□□ 1.19
VPS52-214ENST00000463486 SRCIN1Q9C0H9 1055 aa22.47■■□□□ 1.19
VPS52-214ENST00000463486 SEC31BQ9NQW1 1179 aa22.47■■□□□ 1.19
VPS52-214ENST00000463486 ATP6V0A2Q9Y487 856 aa22.47■■□□□ 1.19
VPS52-214ENST00000463486 BCAR3O75815 825 aa22.46■■□□□ 1.19
VPS52-214ENST00000463486 RTKN2Q8IZC4 609 aa22.46■■□□□ 1.19
VPS52-214ENST00000463486 TAOK3Q9H2K8 898 aa22.46■■□□□ 1.19
VPS52-214ENST00000463486 CSF1RP07333 972 aa22.45■■□□□ 1.18
VPS52-214ENST00000463486 CTSWP56202 376 aa22.45■■□□□ 1.18
VPS52-214ENST00000463486 FKBP4Q02790 459 aaKnown RBP eCLIP22.45■■□□□ 1.18
VPS52-214ENST00000463486 SP8Q8IXZ3 490 aa22.45■■□□□ 1.18
VPS52-214ENST00000463486 RNF181Q9P0P0 153 aa22.45■■□□□ 1.18
VPS52-214ENST00000463486 GRM8O00222 908 aa22.44■■□□□ 1.18
VPS52-214ENST00000463486 UTYO14607 1347 aa22.44■■□□□ 1.18
VPS52-214ENST00000463486 FOXO4P98177 505 aa22.44■■□□□ 1.18
VPS52-214ENST00000463486 CCDC152Q4G0S7 254 aa22.44■■□□□ 1.18
VPS52-214ENST00000463486 PSMD1Q99460 953 aa22.44■■□□□ 1.18
VPS52-214ENST00000463486 RTL9Q8NET4 1388 aa22.43■■□□□ 1.18
VPS52-214ENST00000463486 ARHGAP45Q92619 1136 aa22.43■■□□□ 1.18
VPS52-214ENST00000463486 KAZALD1Q96I82 304 aa22.43■■□□□ 1.18
VPS52-214ENST00000463486 CCDC85AQ96PX6 553 aaPredicted RBP22.43■■□□□ 1.18
VPS52-214ENST00000463486 RPS8P62241 208 aaKnown RBP22.42■■□□□ 1.18
VPS52-214ENST00000463486 GRIPAP1Q4V328 841 aa22.42■■□□□ 1.18
VPS52-214ENST00000463486 EPHA10Q5JZY3 1008 aa22.42■■□□□ 1.18
VPS52-214ENST00000463486 GREM2Q9H772 168 aa22.42■■□□□ 1.18
VPS52-214ENST00000463486 CCDC88AQ3V6T2 1871 aa22.42■■□□□ 1.18
VPS52-214ENST00000463486 LRRC37AA6NMS7 1700 aa22.41■■□□□ 1.18
VPS52-214ENST00000463486 NBPF7P0C2Y1 421 aaPredicted RBP22.41■■□□□ 1.18
VPS52-214ENST00000463486 TMC4Q7Z404 712 aa22.41■■□□□ 1.18
VPS52-214ENST00000463486 RTFDC1Q9BY42 306 aaPredicted RBP22.41■■□□□ 1.18
VPS52-214ENST00000463486 USP44Q9H0E7 712 aa22.41■■□□□ 1.18
VPS52-214ENST00000463486 ZNF277Q9NRM2 450 aaPredicted RBP22.41■■□□□ 1.18
VPS52-214ENST00000463486 MYH3P11055 1940 aa22.4■■□□□ 1.18
VPS52-214ENST00000463486 KIF16BQ96L93 1317 aa22.39■■□□□ 1.18
VPS52-214ENST00000463486 API5Q9BZZ5 524 aaKnown RBP22.39■■□□□ 1.17
VPS52-214ENST00000463486 C9orf78Q9NZ63 289 aaPredicted RBP22.39■■□□□ 1.17
VPS52-214ENST00000463486 TNNQ9UQP3 1299 aa22.39■■□□□ 1.17
VPS52-214ENST00000463486 DICER1Q9UPY3 1922 aaKnown RBP22.39■■□□□ 1.17
VPS52-214ENST00000463486 ZC3H4Q9UPT8 1303 aaKnown RBP22.38■■□□□ 1.17
VPS52-214ENST00000463486 COL4A5P29400 1685 aa22.38■■□□□ 1.17
VPS52-214ENST00000463486 DUOX1Q9NRD9 1551 aa22.38■■□□□ 1.17
VPS52-214ENST00000463486 SUCLG2Q96I99 432 aa22.37■■□□□ 1.17
VPS52-214ENST00000463486 TRIM27P14373 513 aa22.36■■□□□ 1.17
VPS52-214ENST00000463486 IARSP41252 1262 aaKnown RBP22.36■■□□□ 1.17
VPS52-214ENST00000463486 CCT4P50991 539 aaKnown RBP22.36■■□□□ 1.17
VPS52-214ENST00000463486 FAM161AQ3B820 660 aa22.36■■□□□ 1.17
VPS52-214ENST00000463486 MPNDQ8N594 471 aa22.36■■□□□ 1.17
VPS52-214ENST00000463486 LTBP1Q14766 1721 aa22.36■■□□□ 1.17
VPS52-214ENST00000463486 ITGA6P23229 1130 aa22.35■■□□□ 1.17
VPS52-214ENST00000463486 GPSM2P81274 684 aa22.35■■□□□ 1.17
VPS52-214ENST00000463486 INTS3Q68E01 1043 aaKnown RBP22.35■■□□□ 1.17
VPS52-214ENST00000463486 LMBR1LQ6UX01 489 aa22.35■■□□□ 1.17
VPS52-214ENST00000463486 ATF7IPQ6VMQ6 1270 aa22.35■■□□□ 1.17
VPS52-214ENST00000463486 TIAM2Q8IVF5 1701 aa22.34■■□□□ 1.17
VPS52-214ENST00000463486 RABL6Q3YEC7 729 aaPredicted RBP22.34■■□□□ 1.17
VPS52-214ENST00000463486 DPP8Q6V1X1 898 aaPredicted RBP22.34■■□□□ 1.17
VPS52-214ENST00000463486 IPO8O15397 1037 aaKnown RBP22.33■■□□□ 1.17
VPS52-214ENST00000463486 ANKRD18AQ8IVF6 992 aa22.33■■□□□ 1.17
VPS52-214ENST00000463486 ANKRD44Q8N8A2 993 aa22.33■■□□□ 1.17
VPS52-214ENST00000463486 ZNF526Q8TF50 670 aaPredicted RBP22.33■■□□□ 1.17
VPS52-214ENST00000463486 CDC5LQ99459 802 aaKnown RBP22.33■■□□□ 1.17
VPS52-214ENST00000463486 BSDC1Q9NW68 430 aaPredicted RBP22.33■■□□□ 1.17
VPS52-214ENST00000463486 PODXL2Q9NZ53 605 aa22.33■■□□□ 1.17
VPS52-214ENST00000463486 POLLQ9UGP5 575 aa22.33■■□□□ 1.17
VPS52-214ENST00000463486 GLTPD2A6NH11 291 aa22.32■■□□□ 1.16
VPS52-214ENST00000463486 FZD9O00144 591 aa22.32■■□□□ 1.16
VPS52-214ENST00000463486 FRAT1Q92837 279 aaPredicted RBP22.32■■□□□ 1.16
VPS52-214ENST00000463486 TMX4Q9H1E5 349 aaPredicted RBP22.32■■□□□ 1.16
VPS52-214ENST00000463486 VPS33BQ9H267 617 aa22.32■■□□□ 1.16
VPS52-214ENST00000463486 NSFL1CQ9UNZ2 370 aaKnown RBP22.32■■□□□ 1.16
VPS52-214ENST00000463486 BICC1Q9H694 974 aaKnown RBP22.31■■□□□ 1.16
VPS52-214ENST00000463486 MINPP1Q9UNW1 487 aa22.31■■□□□ 1.16
VPS52-214ENST00000463486 WTIPA6NIX2 430 aaPredicted RBP22.3■■□□□ 1.16
VPS52-214ENST00000463486 KIAA2012Q0VF49 1180 aa22.3■■□□□ 1.16
VPS52-214ENST00000463486 ZKSCAN2Q63HK3 967 aa22.3■■□□□ 1.16
VPS52-214ENST00000463486 TBC1D16Q8TBP0 767 aa22.3■■□□□ 1.16
VPS52-214ENST00000463486 GPBP1L1Q9HC44 474 aaPredicted RBP22.3■■□□□ 1.16
VPS52-214ENST00000463486 AOC3Q16853 763 aa22.29■■□□□ 1.16
VPS52-214ENST00000463486 SUPT20HQ8NEM7 779 aa22.29■■□□□ 1.16
VPS52-214ENST00000463486 NMRK2Q9NPI5 230 aa22.29■■□□□ 1.16
VPS52-214ENST00000463486 ANKRD18BA2A2Z9 1011 aa22.28■■□□□ 1.16
VPS52-214ENST00000463486 POTECB2RU33 542 aa22.28■■□□□ 1.16
VPS52-214ENST00000463486 KIF3CO14782 793 aa22.28■■□□□ 1.16
VPS52-214ENST00000463486 IFIT5Q13325 482 aaKnown RBP22.28■■□□□ 1.16
VPS52-214ENST00000463486 LARGE2Q8N3Y3 721 aa22.28■■□□□ 1.16
VPS52-214ENST00000463486 CLUAP1Q96AJ1 413 aa22.28■■□□□ 1.16
VPS52-214ENST00000463486 MEIS3Q99687 375 aa22.28■■□□□ 1.16
VPS52-214ENST00000463486 ZNF541Q9H0D2 1346 aa22.28■■□□□ 1.16
VPS52-214ENST00000463486 PPIP5K2O43314 1243 aa22.27■■□□□ 1.16
VPS52-214ENST00000463486 RLBP1P12271 317 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms